RNA–Protein interactions for RNA: ENST00000487758.5

NVL-218, Transcript of nuclear VCP-like, humanhuman

TSL 4

Gene NVL, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NVL-218ENST00000487758 AEBP2Q6ZN18 517 aaPredicted RBP41.45■■■■■ 4.23
NVL-218ENST00000487758 CHIC1Q5VXU3 224 aa40.11■■■■■ 4.01
NVL-218ENST00000487758 SENP3Q9H4L4 574 aaPredicted RBP35.28■■■■□ 3.24
NVL-218ENST00000487758 PHF23Q9BUL5 403 aaPredicted RBP35.21■■■■□ 3.23
NVL-218ENST00000487758 FOXD1Q16676 465 aa32.75■■■□□ 2.83
NVL-218ENST00000487758 PLPPR3Q6T4P5 718 aa32.42■■■□□ 2.78
NVL-218ENST00000487758 PPP6R1Q9UPN7 881 aa31.18■■■□□ 2.58
NVL-218ENST00000487758 ADRA2BP18089 450 aa31.16■■■□□ 2.58
NVL-218ENST00000487758 PIAS4Q8N2W9 510 aaPredicted RBP30.84■■■□□ 2.53
NVL-218ENST00000487758 MSH5O43196 834 aa30.4■■■□□ 2.46
NVL-218ENST00000487758 SCAF1Q9H7N4 1312 aaKnown RBP28.54■■■□□ 2.16
NVL-218ENST00000487758 PPP4R3CPQ6ZMV5 832 aa28.51■■■□□ 2.15
NVL-218ENST00000487758 MAPK8IP2Q13387 824 aaPredicted RBP28.38■■■□□ 2.13
NVL-218ENST00000487758 POTEDQ86YR6 584 aa28.34■■■□□ 2.13
NVL-218ENST00000487758 DMRT2Q9Y5R5 561 aa28.07■■■□□ 2.08
NVL-218ENST00000487758 CNKSR2Q8WXI2 1034 aa27.8■■■□□ 2.04
NVL-218ENST00000487758 NCBP3Q53F19 620 aaKnown RBP27.68■■■□□ 2.02
NVL-218ENST00000487758 KCNA4P22459 653 aa27.41■■□□□ 1.98
NVL-218ENST00000487758 RNF216Q9NWF9 866 aaPredicted RBP27.35■■□□□ 1.97
NVL-218ENST00000487758 HOXD11P31277 338 aaPredicted RBP27.33■■□□□ 1.97
NVL-218ENST00000487758 NPM3O75607 178 aaKnown RBP27.24■■□□□ 1.95
NVL-218ENST00000487758 DCAF8L1A6NGE4 600 aa26.95■■□□□ 1.9
NVL-218ENST00000487758 DNAJC5BQ9UF47 199 aa26.46■■□□□ 1.83
NVL-218ENST00000487758 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.1■■□□□ 1.77
NVL-218ENST00000487758 SLC4A1APQ9BWU0 796 aaKnown RBP26.05■■□□□ 1.76
NVL-218ENST00000487758 RNF39Q9H2S5 420 aa25.98■■□□□ 1.75
NVL-218ENST00000487758 SLC4A2P04920 1241 aa25.8■■□□□ 1.72
NVL-218ENST00000487758 C1QBPQ07021 282 aaKnown RBP25.65■■□□□ 1.7
NVL-218ENST00000487758 CACNB1Q02641 598 aaPredicted RBP25.63■■□□□ 1.69
NVL-218ENST00000487758 U3KPZ7 1027 aaPredicted RBP25.61■■□□□ 1.69
NVL-218ENST00000487758 FOXD4L1Q9NU39 408 aa25.36■■□□□ 1.65
NVL-218ENST00000487758 MYCNP04198 464 aaPredicted RBP25.21■■□□□ 1.63
NVL-218ENST00000487758 ZBTB22O15209 634 aa25.2■■□□□ 1.62
NVL-218ENST00000487758 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.17■■□□□ 1.62
NVL-218ENST00000487758 HNRNPUL2Q1KMD3 747 aaKnown RBP25.17■■□□□ 1.62
NVL-218ENST00000487758 SAMD1Q6SPF0 538 aaPredicted RBP25.06■■□□□ 1.6
NVL-218ENST00000487758 APLP2Q06481 763 aa25.02■■□□□ 1.6
NVL-218ENST00000487758 SPINK5Q9NQ38 1064 aaPredicted RBP25■■□□□ 1.59
NVL-218ENST00000487758 CAPN15O75808 1086 aa24.96■■□□□ 1.59
NVL-218ENST00000487758 EHMT2Q96KQ7 1210 aa24.89■■□□□ 1.58
NVL-218ENST00000487758 TRHP20396 242 aaPredicted RBP24.75■■□□□ 1.55
NVL-218ENST00000487758 ZNF219Q9P2Y4 722 aaPredicted RBP24.73■■□□□ 1.55
NVL-218ENST00000487758 CSRNP3Q8WYN3 585 aa24.72■■□□□ 1.55
NVL-218ENST00000487758 DSG3P32926 999 aa24.58■■□□□ 1.53
NVL-218ENST00000487758 ATF5Q9Y2D1 282 aaPredicted RBP24.52■■□□□ 1.52
NVL-218ENST00000487758 ATXN8OSP0DMR3 200 aa24.48■■□□□ 1.51
NVL-218ENST00000487758 ABCB7O75027 752 aa24.45■■□□□ 1.5
NVL-218ENST00000487758 POLA2Q14181 598 aa24.22■■□□□ 1.47
NVL-218ENST00000487758 ZBTB12Q9Y330 459 aaPredicted RBP23.83■■□□□ 1.41
NVL-218ENST00000487758 FBLN2P98095 1184 aa23.59■■□□□ 1.37
NVL-218ENST00000487758 RBM42Q9BTD8 480 aaKnown RBP23.49■■□□□ 1.35
NVL-218ENST00000487758 OSCARQ8IYS5 282 aa23.46■■□□□ 1.35
NVL-218ENST00000487758 MKRN4PQ13434 485 aaPredicted RBP23.44■■□□□ 1.34
NVL-218ENST00000487758 SPDYE2BA6NHP3 402 aa23.14■■□□□ 1.29
NVL-218ENST00000487758 SPDYE6P0CI01 402 aa23.14■■□□□ 1.29
NVL-218ENST00000487758 SPDYE2Q495Y8 402 aa23.14■■□□□ 1.29
NVL-218ENST00000487758 AKT1S1Q96B36 256 aa23.09■■□□□ 1.29
NVL-218ENST00000487758 ZNF692Q9BU19 519 aaPredicted RBP22.99■■□□□ 1.27
NVL-218ENST00000487758 SSUH2Q9Y2M2 353 aa22.9■■□□□ 1.26
NVL-218ENST00000487758 REM2Q8IYK8 340 aaPredicted RBP22.86■■□□□ 1.25
NVL-218ENST00000487758 SPDYE4A6NLX3 237 aa22.76■■□□□ 1.23
NVL-218ENST00000487758 PABPN1Q86U42 306 aaKnown RBP eCLIP22.67■■□□□ 1.22
NVL-218ENST00000487758 CHRDL2Q6WN34 429 aa22.65■■□□□ 1.22
NVL-218ENST00000487758 PITPNM1O00562 1244 aa22.62■■□□□ 1.21
NVL-218ENST00000487758 SPDYE1Q8NFV5 336 aaPredicted RBP22.56■■□□□ 1.2
NVL-218ENST00000487758 CLEC11AQ9Y240 323 aa22.49■■□□□ 1.19
NVL-218ENST00000487758 FKBP8Q14318 412 aa22.43■■□□□ 1.18
NVL-218ENST00000487758 POTEHQ6S545 545 aa22.37■■□□□ 1.17
NVL-218ENST00000487758 PROM2Q8N271 834 aa22.29■■□□□ 1.16
NVL-218ENST00000487758 PIP4P2Q8N4L2 257 aa22.27■■□□□ 1.16
NVL-218ENST00000487758 FXR2P51116 673 aaKnown RBP eCLIP22.24■■□□□ 1.15
NVL-218ENST00000487758 PRR29P0C7W0 189 aa22.22■■□□□ 1.15
NVL-218ENST00000487758 STAG3Q9UJ98 1225 aa22.22■■□□□ 1.15
NVL-218ENST00000487758 PRKAR2AP13861 404 aaKnown RBP22.05■■□□□ 1.12
NVL-218ENST00000487758 CHADLQ6NUI6 762 aa21.96■■□□□ 1.11
NVL-218ENST00000487758 CREBZFQ9NS37 354 aa21.82■■□□□ 1.08
NVL-218ENST00000487758 FBXO3Q9UK99 471 aa21.73■■□□□ 1.07
NVL-218ENST00000487758 FARP1Q9Y4F1 1045 aaPredicted RBP21.71■■□□□ 1.07
NVL-218ENST00000487758 HAX1O00165 279 aa21.67■■□□□ 1.06
NVL-218ENST00000487758 MIER1Q8N108 512 aa21.62■■□□□ 1.05
NVL-218ENST00000487758 PLEKHG5O94827 1062 aa21.59■■□□□ 1.05
NVL-218ENST00000487758 PLCD3Q8N3E9 789 aa21.58■■□□□ 1.05
NVL-218ENST00000487758 C19orf67A6NJJ6 358 aa21.51■■□□□ 1.03
NVL-218ENST00000487758 MNX1P50219 401 aaPredicted RBP21.51■■□□□ 1.03
NVL-218ENST00000487758 NPM1P06748 294 aaKnown RBP eCLIP21.49■■□□□ 1.03
NVL-218ENST00000487758 VASPP50552 380 aaPredicted RBP21.45■■□□□ 1.02
NVL-218ENST00000487758 CD44P16070 742 aaKnown RBP21.41■■□□□ 1.02
NVL-218ENST00000487758 EVX2Q03828 476 aa21.4■■□□□ 1.02
NVL-218ENST00000487758 ZBTB47Q9UFB7 747 aaPredicted RBP21.36■■□□□ 1.01
NVL-218ENST00000487758 SP7Q8TDD2 431 aaPredicted RBP21.34■■□□□ 1.01
NVL-218ENST00000487758 PAK3O75914 559 aaPredicted RBP21.25■□□□□ 0.99
NVL-218ENST00000487758 ZRANB1Q9UGI0 708 aa21.22■□□□□ 0.99
NVL-218ENST00000487758 KLHL34Q8N239 644 aa21.19■□□□□ 0.98
NVL-218ENST00000487758 RASEFQ8IZ41 740 aa21.11■□□□□ 0.97
NVL-218ENST00000487758 TSPYL2Q9H2G4 693 aaPredicted RBP21.11■□□□□ 0.97
NVL-218ENST00000487758 ZNF579Q8NAF0 562 aaKnown RBP21.1■□□□□ 0.97
NVL-218ENST00000487758 NUBP1P53384 320 aa21.09■□□□□ 0.97
NVL-218ENST00000487758 IFNLR1Q8IU57 520 aaPredicted RBP21.09■□□□□ 0.97
NVL-218ENST00000487758 GABBR2O75899 941 aa21■□□□□ 0.95
NVL-218ENST00000487758 FAM212AQ96EL1 285 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 284.7 ms