RNA–Protein interactions for RNA: ENST00000339463.7

GFI1B-201, Transcript of growth factor independent 1B transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GFI1B, Length 2,449 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1B-201ENST00000339463 NISCHQ9Y2I1 1504 aa23.84■■□□□ 1.41
GFI1B-201ENST00000339463 CCDC180Q9P1Z9 1646 aa20.38■□□□□ 0.85
GFI1B-201ENST00000339463 ZCCHC6Q5VYS8 1495 aaKnown RBP20.12■□□□□ 0.81
GFI1B-201ENST00000339463 SHROOM4Q9ULL8 1493 aa20.09■□□□□ 0.81
GFI1B-201ENST00000339463 DCAF8L2P0C7V8 631 aa19.8■□□□□ 0.76
GFI1B-201ENST00000339463 SUPT5HO00267 1087 aaKnown RBP19.57■□□□□ 0.72
GFI1B-201ENST00000339463 DCAF1Q9Y4B6 1507 aa19.57■□□□□ 0.72
GFI1B-201ENST00000339463 PELP1Q8IZL8 1130 aaKnown RBP19.18■□□□□ 0.66
GFI1B-201ENST00000339463 MYO15BQ96JP2 1530 aa19.12■□□□□ 0.65
GFI1B-201ENST00000339463 ABCC9O60706 1549 aa19.1■□□□□ 0.65
GFI1B-201ENST00000339463 SCRIBQ14160 1630 aa19.05■□□□□ 0.64
GFI1B-201ENST00000339463 NACADO15069 1562 aa18.92■□□□□ 0.62
GFI1B-201ENST00000339463 CHIC1Q5VXU3 224 aa18.92■□□□□ 0.62
GFI1B-201ENST00000339463 MYT1Q01538 1121 aa18.91■□□□□ 0.62
GFI1B-201ENST00000339463 RSF1Q96T23 1441 aaPredicted RBP18.77■□□□□ 0.59
GFI1B-201ENST00000339463 RB1CC1Q8TDY2 1594 aa18.66■□□□□ 0.58
GFI1B-201ENST00000339463 CECR2Q9BXF3 1484 aa18.62■□□□□ 0.57
GFI1B-201ENST00000339463 MROH2BQ7Z745 1585 aa18.52■□□□□ 0.56
GFI1B-201ENST00000339463 WIZO95785 1651 aa18.39■□□□□ 0.53
GFI1B-201ENST00000339463 UNC13AQ9UPW8 1703 aa18.37■□□□□ 0.53
GFI1B-201ENST00000339463 LOC105371045A0A1W2PR82 267 aa18.34■□□□□ 0.53
GFI1B-201ENST00000339463 BAZ1AQ9NRL2 1556 aaPredicted RBP18.33■□□□□ 0.52
GFI1B-201ENST00000339463 TRIM41Q8WV44 630 aa18.27■□□□□ 0.51
GFI1B-201ENST00000339463 PABPN1Q86U42 306 aaKnown RBP eCLIP18.22■□□□□ 0.51
GFI1B-201ENST00000339463 SMARCA4P51532 1647 aa18.2■□□□□ 0.5
GFI1B-201ENST00000339463 TTBK1Q5TCY1 1321 aaPredicted RBP18.2■□□□□ 0.5
GFI1B-201ENST00000339463 BICRAQ9NZM4 1560 aa18.18■□□□□ 0.5
GFI1B-201ENST00000339463 TOP2AP11388 1531 aaKnown RBP18.11■□□□□ 0.49
GFI1B-201ENST00000339463 FAM9AQ8IZU1 332 aaPredicted RBP18.09■□□□□ 0.49
GFI1B-201ENST00000339463 EIF4G1Q04637 1599 aaKnown RBP18.04■□□□□ 0.48
GFI1B-201ENST00000339463 PCGF6Q9BYE7 350 aa18.04■□□□□ 0.48
GFI1B-201ENST00000339463 CCDC88BA6NC98 1476 aa18.03■□□□□ 0.48
GFI1B-201ENST00000339463 SMARCA2P51531 1590 aa18■□□□□ 0.47
GFI1B-201ENST00000339463 EHMT2Q96KQ7 1210 aa17.93■□□□□ 0.46
GFI1B-201ENST00000339463 ABCC8Q09428 1581 aa17.89■□□□□ 0.45
GFI1B-201ENST00000339463 PEG3Q9GZU2 1588 aa17.89■□□□□ 0.45
GFI1B-201ENST00000339463 HRCP23327 699 aa17.84■□□□□ 0.45
GFI1B-201ENST00000339463 ATAD2BQ9ULI0 1458 aa17.82■□□□□ 0.44
GFI1B-201ENST00000339463 TRIM26Q12899 539 aaPredicted RBP17.76■□□□□ 0.43
GFI1B-201ENST00000339463 BAZ1BQ9UIG0 1483 aaKnown RBP17.74■□□□□ 0.43
GFI1B-201ENST00000339463 SOGA1O94964 1423 aa17.67■□□□□ 0.42
GFI1B-201ENST00000339463 PRKCSHP14314 528 aaPredicted RBP17.64■□□□□ 0.41
GFI1B-201ENST00000339463 WRNQ14191 1432 aaPredicted RBP eCLIP17.63■□□□□ 0.41
GFI1B-201ENST00000339463 RUSC2Q8N2Y8 1516 aa17.6■□□□□ 0.41
GFI1B-201ENST00000339463 SYNJ1O43426 1573 aa17.55■□□□□ 0.4
GFI1B-201ENST00000339463 CSRNP3Q8WYN3 585 aa17.53■□□□□ 0.4
GFI1B-201ENST00000339463 NCAPD3P42695 1498 aa17.52■□□□□ 0.4
GFI1B-201ENST00000339463 PPARGC1BQ86YN6 1023 aaKnown RBP17.52■□□□□ 0.4
GFI1B-201ENST00000339463 EEA1Q15075 1411 aa17.52■□□□□ 0.4
GFI1B-201ENST00000339463 HMGXB3Q12766 1538 aa17.49■□□□□ 0.39
GFI1B-201ENST00000339463 CEP162Q5TB80 1403 aa17.46■□□□□ 0.39
GFI1B-201ENST00000339463 TNIKQ9UKE5 1360 aa17.44■□□□□ 0.38
GFI1B-201ENST00000339463 UBTFP17480 764 aaKnown RBP17.43■□□□□ 0.38
GFI1B-201ENST00000339463 SCAF1Q9H7N4 1312 aaKnown RBP17.39■□□□□ 0.37
GFI1B-201ENST00000339463 GOLGA3Q08378 1498 aa17.39■□□□□ 0.37
GFI1B-201ENST00000339463 TOP2BQ02880 1626 aa17.36■□□□□ 0.37
GFI1B-201ENST00000339463 ERICH6Q7L0X2 663 aa17.35■□□□□ 0.37
GFI1B-201ENST00000339463 CEP164Q9UPV0 1460 aa17.32■□□□□ 0.36
GFI1B-201ENST00000339463 CFTRP13569 1480 aa17.31■□□□□ 0.36
GFI1B-201ENST00000339463 KIF21BO75037 1637 aa17.3■□□□□ 0.36
GFI1B-201ENST00000339463 BIVM-ERCC5R4GMW8 1640 aa17.29■□□□□ 0.36
GFI1B-201ENST00000339463 APLP2Q06481 763 aa17.28■□□□□ 0.36
GFI1B-201ENST00000339463 RAPGEF2Q9Y4G8 1499 aa17.26■□□□□ 0.35
GFI1B-201ENST00000339463 CUX1P39880 1505 aa17.26■□□□□ 0.35
GFI1B-201ENST00000339463 BCL11AQ9H165 835 aa17.25■□□□□ 0.35
GFI1B-201ENST00000339463 ZEB1P37275 1124 aaPredicted RBP17.21■□□□□ 0.35
GFI1B-201ENST00000339463 CC2D2AQ9P2K1 1620 aa17.21■□□□□ 0.35
GFI1B-201ENST00000339463 CLIP1P30622 1438 aa17.19■□□□□ 0.34
GFI1B-201ENST00000339463 CADPSQ9ULU8 1353 aa17.16■□□□□ 0.34
GFI1B-201ENST00000339463 RANGAP1P46060 587 aaPredicted RBP17.15■□□□□ 0.34
GFI1B-201ENST00000339463 PRXQ9BXM0 1461 aa17.13■□□□□ 0.33
GFI1B-201ENST00000339463 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.12■□□□□ 0.33
GFI1B-201ENST00000339463 PRDM2Q13029 1718 aa17.11■□□□□ 0.33
GFI1B-201ENST00000339463 KIF27Q86VH2 1401 aa17.1■□□□□ 0.33
GFI1B-201ENST00000339463 ERICH3Q5RHP9 1530 aa17.08■□□□□ 0.33
GFI1B-201ENST00000339463 VPS8Q8N3P4 1428 aa17.08■□□□□ 0.32
GFI1B-201ENST00000339463 SLC24A1O60721 1099 aa17.07■□□□□ 0.32
GFI1B-201ENST00000339463 CCER1Q8TC90 406 aaPredicted RBP17.03■□□□□ 0.32
GFI1B-201ENST00000339463 CUX2O14529 1486 aa17■□□□□ 0.31
GFI1B-201ENST00000339463 FGD5Q6ZNL6 1462 aa16.99■□□□□ 0.31
GFI1B-201ENST00000339463 FANCD2Q9BXW9 1451 aa16.99■□□□□ 0.31
GFI1B-201ENST00000339463 NESP48681 1621 aa16.96■□□□□ 0.31
GFI1B-201ENST00000339463 IGF1RP08069 1367 aa16.96■□□□□ 0.31
GFI1B-201ENST00000339463 ARAP1Q96P48 1450 aa16.95■□□□□ 0.3
GFI1B-201ENST00000339463 DNAJC5BQ9UF47 199 aa16.92■□□□□ 0.3
GFI1B-201ENST00000339463 HNRNPUL2Q1KMD3 747 aaKnown RBP16.87■□□□□ 0.29
GFI1B-201ENST00000339463 CARMIL1Q5VZK9 1371 aa16.86■□□□□ 0.29
GFI1B-201ENST00000339463 ARHGAP35Q9NRY4 1499 aa16.86■□□□□ 0.29
GFI1B-201ENST00000339463 DNMBPQ6XZF7 1577 aa16.85■□□□□ 0.29
GFI1B-201ENST00000339463 RAD54L2Q9Y4B4 1467 aa16.85■□□□□ 0.29
GFI1B-201ENST00000339463 TOPBP1Q92547 1522 aa16.85■□□□□ 0.29
GFI1B-201ENST00000339463 POLA1P09884 1462 aaPredicted RBP16.83■□□□□ 0.29
GFI1B-201ENST00000339463 KANK4Q5T7N3 995 aaPredicted RBP16.83■□□□□ 0.28
GFI1B-201ENST00000339463 CENPBP07199 599 aaPredicted RBP16.81■□□□□ 0.28
GFI1B-201ENST00000339463 LAMC3Q9Y6N6 1575 aa16.8■□□□□ 0.28
GFI1B-201ENST00000339463 ABCA10Q8WWZ4 1543 aa16.79■□□□□ 0.28
GFI1B-201ENST00000339463 URB2Q14146 1524 aaKnown RBP16.76■□□□□ 0.27
GFI1B-201ENST00000339463 PDS5BQ9NTI5 1447 aa16.7■□□□□ 0.26
GFI1B-201ENST00000339463 TDRD9Q8NDG6 1382 aaKnown RBP16.67■□□□□ 0.26
GFI1B-201ENST00000339463 P3H3Q8IVL6 736 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms