Protein–RNA interactions for Protein: Q96FV3

TSPAN17, Tetraspanin-17, humanhuman

Predictions only

Length 270 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17Q96FV3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TSPAN17Q96FV3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TSPAN17Q96FV3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TSPAN17Q96FV3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TSPAN17Q96FV3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TSPAN17Q96FV3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TSPAN17Q96FV3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TSPAN17Q96FV3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TSPAN17Q96FV3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TSPAN17Q96FV3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TSPAN17Q96FV3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.96■□□□□ 0.95
TSPAN17Q96FV3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.96■□□□□ 0.95
TSPAN17Q96FV3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
TSPAN17Q96FV3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TSPAN17Q96FV3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TSPAN17Q96FV3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.96■□□□□ 0.95
TSPAN17Q96FV3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.96■□□□□ 0.95
TSPAN17Q96FV3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.96■□□□□ 0.95
TSPAN17Q96FV3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
TSPAN17Q96FV3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TSPAN17Q96FV3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TSPAN17Q96FV3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
TSPAN17Q96FV3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
TSPAN17Q96FV3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TSPAN17Q96FV3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TSPAN17Q96FV3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
TSPAN17Q96FV3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TSPAN17Q96FV3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
TSPAN17Q96FV3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TSPAN17Q96FV3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TSPAN17Q96FV3 AC099791.1-201ENST00000416440 715 ntBASIC20.95■□□□□ 0.94
TSPAN17Q96FV3 AC096631.2-201ENST00000436136 790 ntBASIC20.95■□□□□ 0.94
TSPAN17Q96FV3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.95■□□□□ 0.94
TSPAN17Q96FV3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TSPAN17Q96FV3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TSPAN17Q96FV3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
TSPAN17Q96FV3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
TSPAN17Q96FV3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.95■□□□□ 0.94
TSPAN17Q96FV3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
TSPAN17Q96FV3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TSPAN17Q96FV3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.94■□□□□ 0.94
TSPAN17Q96FV3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TSPAN17Q96FV3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.94■□□□□ 0.94
TSPAN17Q96FV3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TSPAN17Q96FV3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.94■□□□□ 0.94
TSPAN17Q96FV3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TSPAN17Q96FV3 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.94■□□□□ 0.94
TSPAN17Q96FV3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.94■□□□□ 0.94
TSPAN17Q96FV3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.94■□□□□ 0.94
TSPAN17Q96FV3 PBX2P1-201ENST00000493219 1291 ntBASIC20.94■□□□□ 0.94
TSPAN17Q96FV3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.94■□□□□ 0.94
TSPAN17Q96FV3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TSPAN17Q96FV3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TSPAN17Q96FV3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.94■□□□□ 0.94
TSPAN17Q96FV3 AL049796.1-201ENST00000565336 1766 ntBASIC20.94■□□□□ 0.94
TSPAN17Q96FV3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TSPAN17Q96FV3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TSPAN17Q96FV3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TSPAN17Q96FV3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TSPAN17Q96FV3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TSPAN17Q96FV3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TSPAN17Q96FV3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TSPAN17Q96FV3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TSPAN17Q96FV3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TSPAN17Q96FV3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TSPAN17Q96FV3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.93■□□□□ 0.94
TSPAN17Q96FV3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TSPAN17Q96FV3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TSPAN17Q96FV3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.93■□□□□ 0.94
TSPAN17Q96FV3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.93■□□□□ 0.94
TSPAN17Q96FV3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TSPAN17Q96FV3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TSPAN17Q96FV3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TSPAN17Q96FV3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.93■□□□□ 0.94
TSPAN17Q96FV3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.93■□□□□ 0.94
TSPAN17Q96FV3 AC105233.4-201ENST00000642045 216 ntBASIC20.93■□□□□ 0.94
TSPAN17Q96FV3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TSPAN17Q96FV3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.93■□□□□ 0.94
TSPAN17Q96FV3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TSPAN17Q96FV3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.93■□□□□ 0.94
TSPAN17Q96FV3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TSPAN17Q96FV3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.93■□□□□ 0.94
TSPAN17Q96FV3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TSPAN17Q96FV3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TSPAN17Q96FV3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.92■□□□□ 0.94
TSPAN17Q96FV3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TSPAN17Q96FV3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.92■□□□□ 0.94
TSPAN17Q96FV3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TSPAN17Q96FV3 EDA-201ENST00000338901 1233 ntBASIC20.92■□□□□ 0.94
TSPAN17Q96FV3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TSPAN17Q96FV3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TSPAN17Q96FV3 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.92■□□□□ 0.94
TSPAN17Q96FV3 AC106739.1-201ENST00000617035 715 ntBASIC20.92■□□□□ 0.94
TSPAN17Q96FV3 TSPY26P-201ENST00000476365 1326 ntBASIC20.92■□□□□ 0.94
TSPAN17Q96FV3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TSPAN17Q96FV3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.92■□□□□ 0.94
TSPAN17Q96FV3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TSPAN17Q96FV3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TSPAN17Q96FV3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TSPAN17Q96FV3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms