Protein–RNA interactions for Protein: P20248

CCNA2, Cyclin-A2, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2P20248 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCNA2P20248 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCNA2P20248 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCNA2P20248 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCNA2P20248 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.82■□□□□ 0.76
CCNA2P20248 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCNA2P20248 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.82■□□□□ 0.76
CCNA2P20248 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.82■□□□□ 0.76
CCNA2P20248 AC024257.2-201ENST00000549699 147 ntBASIC19.82■□□□□ 0.76
CCNA2P20248 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCNA2P20248 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCNA2P20248 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.81■□□□□ 0.76
CCNA2P20248 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNA2P20248 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNA2P20248 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNA2P20248 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNA2P20248 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNA2P20248 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.81■□□□□ 0.76
CCNA2P20248 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNA2P20248 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.81■□□□□ 0.76
CCNA2P20248 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CCNA2P20248 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CCNA2P20248 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CCNA2P20248 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCNA2P20248 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCNA2P20248 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.81■□□□□ 0.76
CCNA2P20248 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.81■□□□□ 0.76
CCNA2P20248 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.81■□□□□ 0.76
CCNA2P20248 AC011298.3-201ENST00000615796 283 ntBASIC19.81■□□□□ 0.76
CCNA2P20248 AC136469.2-201ENST00000623944 1028 ntBASIC19.81■□□□□ 0.76
CCNA2P20248 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.81■□□□□ 0.76
CCNA2P20248 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNA2P20248 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNA2P20248 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
CCNA2P20248 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.8■□□□□ 0.76
CCNA2P20248 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCNA2P20248 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCNA2P20248 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCNA2P20248 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.8■□□□□ 0.76
CCNA2P20248 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCNA2P20248 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCNA2P20248 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCNA2P20248 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCNA2P20248 PBX2P1-201ENST00000493219 1291 ntBASIC19.8■□□□□ 0.76
CCNA2P20248 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.8■□□□□ 0.76
CCNA2P20248 MIR4767-201ENST00000582827 78 ntBASIC19.8■□□□□ 0.76
CCNA2P20248 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCNA2P20248 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.8■□□□□ 0.76
CCNA2P20248 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCNA2P20248 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.8■□□□□ 0.76
CCNA2P20248 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCNA2P20248 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCNA2P20248 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCNA2P20248 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCNA2P20248 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
CCNA2P20248 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.79■□□□□ 0.76
CCNA2P20248 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCNA2P20248 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNA2P20248 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNA2P20248 SLC47A1P1-202ENST00000449666 945 ntBASIC19.79■□□□□ 0.76
CCNA2P20248 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
CCNA2P20248 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNA2P20248 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.79■□□□□ 0.76
CCNA2P20248 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CCNA2P20248 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.79■□□□□ 0.76
CCNA2P20248 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNA2P20248 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNA2P20248 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CCNA2P20248 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNA2P20248 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.79■□□□□ 0.76
CCNA2P20248 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CCNA2P20248 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCNA2P20248 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.78■□□□□ 0.76
CCNA2P20248 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCNA2P20248 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCNA2P20248 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.78■□□□□ 0.76
CCNA2P20248 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.78■□□□□ 0.76
CCNA2P20248 OR2I1P-207ENST00000453522 948 ntBASIC19.78■□□□□ 0.76
CCNA2P20248 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.78■□□□□ 0.76
CCNA2P20248 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCNA2P20248 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCNA2P20248 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCNA2P20248 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.78■□□□□ 0.76
CCNA2P20248 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CCNA2P20248 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCNA2P20248 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CCNA2P20248 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCNA2P20248 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.78■□□□□ 0.76
CCNA2P20248 AC135279.3-201ENST00000610945 1311 ntBASIC19.77■□□□□ 0.76
CCNA2P20248 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCNA2P20248 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.77■□□□□ 0.76
CCNA2P20248 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCNA2P20248 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCNA2P20248 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCNA2P20248 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCNA2P20248 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCNA2P20248 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCNA2P20248 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.77■□□□□ 0.76
CCNA2P20248 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCNA2P20248 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms