Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PCP4L1A6NKN8 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCP4L1A6NKN8 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC16.69■□□□□ 0.26
PCP4L1A6NKN8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.69■□□□□ 0.26
PCP4L1A6NKN8 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCP4L1A6NKN8 ESRRAP2-201ENST00000418437 1549 ntBASIC16.69■□□□□ 0.26
PCP4L1A6NKN8 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCP4L1A6NKN8 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
PCP4L1A6NKN8 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCP4L1A6NKN8 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PCP4L1A6NKN8 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCP4L1A6NKN8 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCP4L1A6NKN8 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCP4L1A6NKN8 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PCP4L1A6NKN8 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCP4L1A6NKN8 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.68■□□□□ 0.26
PCP4L1A6NKN8 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCP4L1A6NKN8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCP4L1A6NKN8 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCP4L1A6NKN8 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
PCP4L1A6NKN8 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
PCP4L1A6NKN8 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PCP4L1A6NKN8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCP4L1A6NKN8 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PCP4L1A6NKN8 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PCP4L1A6NKN8 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.68■□□□□ 0.26
PCP4L1A6NKN8 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
PCP4L1A6NKN8 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCP4L1A6NKN8 PKD1P5-201ENST00000532415 10291 ntBASIC16.68■□□□□ 0.26
PCP4L1A6NKN8 AC068418.2-201ENST00000577309 3703 ntBASIC16.68■□□□□ 0.26
PCP4L1A6NKN8 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PCP4L1A6NKN8 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCP4L1A6NKN8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCP4L1A6NKN8 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCP4L1A6NKN8 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.67■□□□□ 0.26
PCP4L1A6NKN8 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCP4L1A6NKN8 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCP4L1A6NKN8 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.67■□□□□ 0.26
PCP4L1A6NKN8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
PCP4L1A6NKN8 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.67■□□□□ 0.26
PCP4L1A6NKN8 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCP4L1A6NKN8 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCP4L1A6NKN8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCP4L1A6NKN8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
PCP4L1A6NKN8 PCDHB18P-201ENST00000524813 2368 ntBASIC16.67■□□□□ 0.26
PCP4L1A6NKN8 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCP4L1A6NKN8 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.67■□□□□ 0.26
PCP4L1A6NKN8 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
PCP4L1A6NKN8 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCP4L1A6NKN8 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCP4L1A6NKN8 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
PCP4L1A6NKN8 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PCP4L1A6NKN8 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCP4L1A6NKN8 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.67■□□□□ 0.26
PCP4L1A6NKN8 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCP4L1A6NKN8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
PCP4L1A6NKN8 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCP4L1A6NKN8 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCP4L1A6NKN8 AP000997.3-201ENST00000623333 2250 ntBASIC16.66■□□□□ 0.26
PCP4L1A6NKN8 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
PCP4L1A6NKN8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.66■□□□□ 0.26
PCP4L1A6NKN8 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCP4L1A6NKN8 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCP4L1A6NKN8 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCP4L1A6NKN8 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCP4L1A6NKN8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC16.66■□□□□ 0.26
PCP4L1A6NKN8 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC16.66■□□□□ 0.26
PCP4L1A6NKN8 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCP4L1A6NKN8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.66■□□□□ 0.26
PCP4L1A6NKN8 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.66■□□□□ 0.26
PCP4L1A6NKN8 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.65■□□□□ 0.26
PCP4L1A6NKN8 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCP4L1A6NKN8 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCP4L1A6NKN8 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCP4L1A6NKN8 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCP4L1A6NKN8 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCP4L1A6NKN8 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCP4L1A6NKN8 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCP4L1A6NKN8 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PCP4L1A6NKN8 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC16.65■□□□□ 0.26
PCP4L1A6NKN8 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PCP4L1A6NKN8 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCP4L1A6NKN8 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
PCP4L1A6NKN8 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCP4L1A6NKN8 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC16.65■□□□□ 0.26
PCP4L1A6NKN8 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCP4L1A6NKN8 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCP4L1A6NKN8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
PCP4L1A6NKN8 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCP4L1A6NKN8 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCP4L1A6NKN8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.64■□□□□ 0.26
PCP4L1A6NKN8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PCP4L1A6NKN8 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
PCP4L1A6NKN8 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PCP4L1A6NKN8 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCP4L1A6NKN8 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
PCP4L1A6NKN8 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PCP4L1A6NKN8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PCP4L1A6NKN8 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCP4L1A6NKN8 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms