Protein–RNA interactions for Protein: Q86UN3

RTN4RL2, Reticulon-4 receptor-like 2, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4RL2Q86UN3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.06■□□□□ 0.48
RTN4RL2Q86UN3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RTN4RL2Q86UN3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTN4RL2Q86UN3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTN4RL2Q86UN3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTN4RL2Q86UN3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RTN4RL2Q86UN3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTN4RL2Q86UN3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTN4RL2Q86UN3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTN4RL2Q86UN3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.05■□□□□ 0.48
RTN4RL2Q86UN3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTN4RL2Q86UN3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RTN4RL2Q86UN3 SERBP1P1-201ENST00000396021 1160 ntBASIC18.05■□□□□ 0.48
RTN4RL2Q86UN3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.05■□□□□ 0.48
RTN4RL2Q86UN3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.05■□□□□ 0.48
RTN4RL2Q86UN3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RTN4RL2Q86UN3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.05■□□□□ 0.48
RTN4RL2Q86UN3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RTN4RL2Q86UN3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTN4RL2Q86UN3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.05■□□□□ 0.48
RTN4RL2Q86UN3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RTN4RL2Q86UN3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.05■□□□□ 0.48
RTN4RL2Q86UN3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RTN4RL2Q86UN3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RTN4RL2Q86UN3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTN4RL2Q86UN3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.04■□□□□ 0.48
RTN4RL2Q86UN3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RTN4RL2Q86UN3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4RL2Q86UN3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.04■□□□□ 0.48
RTN4RL2Q86UN3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4RL2Q86UN3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.04■□□□□ 0.48
RTN4RL2Q86UN3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4RL2Q86UN3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4RL2Q86UN3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4RL2Q86UN3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RTN4RL2Q86UN3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.04■□□□□ 0.48
RTN4RL2Q86UN3 AC104564.3-201ENST00000582367 638 ntBASIC18.04■□□□□ 0.48
RTN4RL2Q86UN3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4RL2Q86UN3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RTN4RL2Q86UN3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.04■□□□□ 0.48
RTN4RL2Q86UN3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4RL2Q86UN3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4RL2Q86UN3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
RTN4RL2Q86UN3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4RL2Q86UN3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4RL2Q86UN3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RTN4RL2Q86UN3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.03■□□□□ 0.48
RTN4RL2Q86UN3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTN4RL2Q86UN3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
RTN4RL2Q86UN3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTN4RL2Q86UN3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTN4RL2Q86UN3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTN4RL2Q86UN3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTN4RL2Q86UN3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.03■□□□□ 0.48
RTN4RL2Q86UN3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTN4RL2Q86UN3 UNC93B3-201ENST00000308076 687 ntBASIC18.03■□□□□ 0.48
RTN4RL2Q86UN3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTN4RL2Q86UN3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.03■□□□□ 0.48
RTN4RL2Q86UN3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.03■□□□□ 0.48
RTN4RL2Q86UN3 OR2I1P-207ENST00000453522 948 ntBASIC18.03■□□□□ 0.48
RTN4RL2Q86UN3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTN4RL2Q86UN3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.03■□□□□ 0.48
RTN4RL2Q86UN3 AC136469.2-201ENST00000623944 1028 ntBASIC18.03■□□□□ 0.48
RTN4RL2Q86UN3 AC003102.1-202ENST00000563394 1796 ntBASIC18.03■□□□□ 0.48
RTN4RL2Q86UN3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
RTN4RL2Q86UN3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RTN4RL2Q86UN3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.03■□□□□ 0.48
RTN4RL2Q86UN3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.03■□□□□ 0.48
RTN4RL2Q86UN3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTN4RL2Q86UN3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RTN4RL2Q86UN3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTN4RL2Q86UN3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTN4RL2Q86UN3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTN4RL2Q86UN3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RTN4RL2Q86UN3 LINC01521-201ENST00000504184 1943 ntBASIC18.02■□□□□ 0.48
RTN4RL2Q86UN3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RTN4RL2Q86UN3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.02■□□□□ 0.48
RTN4RL2Q86UN3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RTN4RL2Q86UN3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.02■□□□□ 0.48
RTN4RL2Q86UN3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTN4RL2Q86UN3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RTN4RL2Q86UN3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.02■□□□□ 0.48
RTN4RL2Q86UN3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RTN4RL2Q86UN3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.02■□□□□ 0.47
RTN4RL2Q86UN3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RTN4RL2Q86UN3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RTN4RL2Q86UN3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RTN4RL2Q86UN3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.02■□□□□ 0.47
RTN4RL2Q86UN3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
RTN4RL2Q86UN3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTN4RL2Q86UN3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTN4RL2Q86UN3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTN4RL2Q86UN3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
RTN4RL2Q86UN3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTN4RL2Q86UN3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTN4RL2Q86UN3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTN4RL2Q86UN3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTN4RL2Q86UN3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTN4RL2Q86UN3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTN4RL2Q86UN3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms