Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.1■□□□□ 0.499e-7■■■■□ 19.8
NCBP2P52298 PTBP1-210ENST00000586944 4661 ntTSL 216.85■□□□□ 0.299e-7■■■■□ 19.8
NCBP2P52298 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.5□□□□□ -0.099e-7■■■■□ 19.8
NCBP2P52298 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.119e-7■■■■□ 19.8
NCBP2P52298 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.169e-7■■■■□ 19.8
NCBP2P52298 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.75□□□□□ -0.219e-7■■■■□ 19.8
NCBP2P52298 PTBP1-216ENST00000590887 642 ntTSL 312.28□□□□□ -0.449e-7■■■■□ 19.8
NCBP2P52298 PTBP1-214ENST00000589575 749 ntTSL 311.99□□□□□ -0.499e-7■■■■□ 19.8
NCBP2P52298 PTBP1-213ENST00000587191 357 ntTSL 510.75□□□□□ -0.699e-7■■■■□ 19.8
NCBP2P52298 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.377e-10■■■■□ 19.7
NCBP2P52298 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.147e-10■■■■□ 19.7
NCBP2P52298 TMEM177-206ENST00000496203 881 ntTSL 1 (best)15.11■□□□□ 0.017e-10■■■■□ 19.7
NCBP2P52298 TMEM177-205ENST00000445518 791 ntTSL 212.9□□□□□ -0.347e-10■■■■□ 19.7
NCBP2P52298 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.397e-10■■■■□ 19.7
NCBP2P52298 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC12.02□□□□□ -0.497e-10■■■■□ 19.7
NCBP2P52298 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.56■□□□□ 0.882e-23■■■■□ 19.7
NCBP2P52298 ZNF101-201ENST00000318110 1830 ntTSL 514.16□□□□□ -0.143e-6■■■■□ 19.7
NCBP2P52298 ZNF101-204ENST00000444249 1152 ntTSL 1 (best) BASIC9.66□□□□□ -0.863e-6■■■■□ 19.7
NCBP2P52298 ZNF101-205ENST00000541458 575 ntTSL 48.2□□□□□ -1.13e-6■■■■□ 19.7
NCBP2P52298 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.223e-6■■■■□ 19.7
NCBP2P52298 WSB1-216ENST00000584114 479 ntTSL 32.96□□□□□ -1.945e-8■■■■□ 19.7
NCBP2P52298 WSB1-212ENST00000583096 834 ntTSL 32.87□□□□□ -1.955e-8■■■■□ 19.7
NCBP2P52298 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.38■□□□□ 0.055e-7■■■■□ 19.7
NCBP2P52298 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.15e-7■■■■□ 19.7
NCBP2P52298 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.145e-7■■■■□ 19.7
NCBP2P52298 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.225e-7■■■■□ 19.7
NCBP2P52298 BCAR1-211ENST00000562556 4659 ntTSL 212.84□□□□□ -0.355e-7■■■■□ 19.7
NCBP2P52298 BCAR1-203ENST00000393422 4064 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.495e-7■■■■□ 19.7
NCBP2P52298 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.07■■□□□ 1.126e-7■■■■□ 19.7
NCBP2P52298 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.113e-15■■■■□ 19.7
NCBP2P52298 ITPA-210ENST00000609835 924 ntTSL 1 (best)20.05■□□□□ 0.81e-11■■■■□ 19.7
NCBP2P52298 ITPA-204ENST00000460550 967 ntTSL 215.43■□□□□ 0.061e-11■■■■□ 19.7
NCBP2P52298 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.09■□□□□ 0.011e-11■■■■□ 19.7
NCBP2P52298 ITPA-208ENST00000483354 1028 ntTSL 315.09■□□□□ 0.011e-11■■■■□ 19.7
NCBP2P52298 ITPA-209ENST00000490838 977 ntTSL 214.63□□□□□ -0.071e-11■■■■□ 19.7
NCBP2P52298 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.191e-11■■■■□ 19.7
NCBP2P52298 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.89□□□□□ -0.191e-11■■■■□ 19.7
NCBP2P52298 ITPA-205ENST00000460676 488 ntTSL 38.77□□□□□ -1.011e-11■■■■□ 19.7
NCBP2P52298 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC11.66□□□□□ -0.542e-8■■■■□ 19.7
NCBP2P52298 LIN54-208ENST00000509748 729 ntTSL 519.33■□□□□ 0.683e-6■■■■□ 19.7
NCBP2P52298 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.95■□□□□ 0.463e-6■■■■□ 19.7
NCBP2P52298 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.133e-6■■■■□ 19.7
NCBP2P52298 ZNF91-206ENST00000595533 695 ntTSL 210.78□□□□□ -0.682e-7■■■■□ 19.7
NCBP2P52298 ZNF91-201ENST00000300619 5489 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.862e-7■■■■□ 19.7
NCBP2P52298 ZNF91-212ENST00000599743 662 ntTSL 3 BASIC9.64□□□□□ -0.872e-7■■■■□ 19.7
NCBP2P52298 ZNF91-209ENST00000596989 565 ntTSL 39.64□□□□□ -0.872e-7■■■■□ 19.7
NCBP2P52298 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.42e-7■■■■□ 19.7
NCBP2P52298 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.27□□□□□ -0.124e-7■■■■□ 19.7
NCBP2P52298 GPC3-201ENST00000370818 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.484e-7■■■■□ 19.7
NCBP2P52298 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC7.62□□□□□ -1.194e-7■■■■□ 19.7
NCBP2P52298 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.849e-7■■■■□ 19.6
NCBP2P52298 NEU4-216ENST00000494678 491 ntTSL 417.76■□□□□ 0.435e-7■■■■□ 19.6
NCBP2P52298 MEGF6-205ENST00000485002 4705 ntTSL 515.18■□□□□ 0.029e-7■■■■□ 19.6
NCBP2P52298 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.35e-7■■■■□ 19.6
NCBP2P52298 UBE2B-205ENST00000506787 500 ntTSL 39.02□□□□□ -0.975e-18■■■■□ 19.6
NCBP2P52298 UBE2B-206ENST00000507277 644 ntTSL 57.32□□□□□ -1.245e-18■■■■□ 19.6
NCBP2P52298 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.067e-12■■■■□ 19.6
NCBP2P52298 GNB1-207ENST00000472614 708 ntTSL 221.1■□□□□ 0.977e-7■■■■□ 19.6
NCBP2P52298 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.98■□□□□ 0.957e-7■■■■□ 19.6
NCBP2P52298 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.617e-7■■■■□ 19.6
NCBP2P52298 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.577e-7■■■■□ 19.6
NCBP2P52298 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.911e-6■■■■□ 19.6
NCBP2P52298 LRP5-206ENST00000529993 5103 ntTSL 1 (best)14.56□□□□□ -0.081e-6■■■■□ 19.6
NCBP2P52298 RPL13-209ENST00000491523 698 ntTSL 320.96■□□□□ 0.957e-22■■■■□ 19.6
NCBP2P52298 RPL13-212ENST00000563749 2367 nt20.83■□□□□ 0.937e-22■■■■□ 19.6
NCBP2P52298 RPL13-208ENST00000487034 615 ntTSL 1 (best)20.57■□□□□ 0.887e-22■■■■□ 19.6
NCBP2P52298 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.877e-22■■■■□ 19.6
NCBP2P52298 RPL13-205ENST00000467736 528 ntTSL 315.34■□□□□ 0.057e-22■■■■□ 19.6
NCBP2P52298 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.017e-22■■■■□ 19.6
NCBP2P52298 RPL13-211ENST00000563270 554 ntTSL 414.06□□□□□ -0.167e-22■■■■□ 19.6
NCBP2P52298 RPL13-207ENST00000484610 924 ntTSL 513.92□□□□□ -0.187e-22■■■■□ 19.6
NCBP2P52298 RPL13-210ENST00000562879 958 ntTSL 1 (best)13.9□□□□□ -0.187e-22■■■■□ 19.6
NCBP2P52298 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.76□□□□□ -0.217e-22■■■■□ 19.6
NCBP2P52298 RPL13-213ENST00000565571 568 ntTSL 212.83□□□□□ -0.367e-22■■■■□ 19.6
NCBP2P52298 RPL13-201ENST00000311528 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.567e-22■■■■□ 19.6
NCBP2P52298 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.825e-10■■■■□ 19.6
NCBP2P52298 SRCAP-203ENST00000411466 836 ntTSL 320.51■□□□□ 0.875e-8■■■■□ 19.6
NCBP2P52298 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.23■■□□□ 1.313e-13■■■■□ 19.5
NCBP2P52298 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.27■■□□□ 1.163e-13■■■■□ 19.5
NCBP2P52298 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.013e-13■■■■□ 19.5
NCBP2P52298 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.28■■□□□ 13e-13■■■■□ 19.5
NCBP2P52298 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.242e-9■■■■□ 19.5
NCBP2P52298 CTBP2-208ENST00000476817 705 ntTSL 319.06■□□□□ 0.642e-9■■■■□ 19.5
NCBP2P52298 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.552e-9■■■■□ 19.5
NCBP2P52298 CTBP2-203ENST00000337195 6939 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.772e-9■■■■□ 19.5
NCBP2P52298 CTBP2-212ENST00000530884 578 ntTSL 39.05□□□□□ -0.962e-9■■■■□ 19.5
NCBP2P52298 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.91■■□□□ 1.95e-7■■■■□ 19.5
NCBP2P52298 SH3GLB2-212ENST00000483980 1015 ntTSL 226.17■■□□□ 1.785e-7■■■■□ 19.5
NCBP2P52298 SH3GLB2-208ENST00000455407 837 ntTSL 225.96■■□□□ 1.755e-7■■■■□ 19.5
NCBP2P52298 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.875e-7■■■■□ 19.5
NCBP2P52298 MEPCE-204ENST00000497759 666 ntTSL 319.28■□□□□ 0.682e-10■■■■□ 19.5
NCBP2P52298 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.91■□□□□ 0.462e-10■■■■□ 19.5
NCBP2P52298 MEPCE-203ENST00000479201 592 ntTSL 212.95□□□□□ -0.342e-10■■■■□ 19.5
NCBP2P52298 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.454e-7■■■■□ 19.5
NCBP2P52298 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.474e-7■■■■□ 19.5
NCBP2P52298 ATP11A-212ENST00000487903 8858 ntAPPRIS P2 TSL 5 BASIC10.14□□□□□ -0.794e-7■■■■□ 19.5
NCBP2P52298 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.076e-9■■■■□ 19.5
NCBP2P52298 CCDC130-207ENST00000587098 617 ntTSL 313.5□□□□□ -0.256e-9■■■■□ 19.5
NCBP2P52298 CCDC130-208ENST00000588071 1157 ntTSL 513.25□□□□□ -0.296e-9■■■■□ 19.5
NCBP2P52298 CCDC130-202ENST00000540216 995 ntTSL 212.35□□□□□ -0.436e-9■■■■□ 19.5
Retrieved 100 of 18,329 protein–RNA pairs in 418 ms