RNA–Protein interactions for RNA: ENST00000472614.2

GNB1-207, Transcript of G protein subunit beta 1, humanhuman

TSL 2

Gene GNB1, Length 708 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNB1-207ENST00000472614 NISCHQ9Y2I1 1504 aa54.85■■■■■ 6.37
GNB1-207ENST00000472614 CCDC180Q9P1Z9 1646 aa48.76■■■■■ 5.4
GNB1-207ENST00000472614 ABCC9O60706 1549 aa47.4■■■■■ 5.18
GNB1-207ENST00000472614 NACADO15069 1562 aa45.87■■■■■ 4.93
GNB1-207ENST00000472614 RB1CC1Q8TDY2 1594 aa45.84■■■■■ 4.93
GNB1-207ENST00000472614 MYO15BQ96JP2 1530 aa45.73■■■■■ 4.91
GNB1-207ENST00000472614 ZCCHC6Q5VYS8 1495 aaKnown RBP45.72■■■■■ 4.91
GNB1-207ENST00000472614 DCAF8L2P0C7V8 631 aa45.7■■■■■ 4.91
GNB1-207ENST00000472614 DCAF1Q9Y4B6 1507 aa45.53■■■■■ 4.88
GNB1-207ENST00000472614 UNC13AQ9UPW8 1703 aa44.55■■■■■ 4.72
GNB1-207ENST00000472614 SCRIBQ14160 1630 aa44.32■■■■■ 4.68
GNB1-207ENST00000472614 PABPN1Q86U42 306 aaKnown RBP eCLIP44.29■■■■■ 4.68
GNB1-207ENST00000472614 BICRAQ9NZM4 1560 aa44.26■■■■■ 4.68
GNB1-207ENST00000472614 SHROOM4Q9ULL8 1493 aa44.18■■■■■ 4.66
GNB1-207ENST00000472614 DNAJC5BQ9UF47 199 aa43.26■■■■■ 4.52
GNB1-207ENST00000472614 EIF4G1Q04637 1599 aaKnown RBP43.17■■■■■ 4.5
GNB1-207ENST00000472614 CC2D2AQ9P2K1 1620 aa42.92■■■■■ 4.46
GNB1-207ENST00000472614 CECR2Q9BXF3 1484 aa42.68■■■■■ 4.42
GNB1-207ENST00000472614 BAZ1AQ9NRL2 1556 aaPredicted RBP42.57■■■■■ 4.41
GNB1-207ENST00000472614 SMARCA4P51532 1647 aa42.49■■■■■ 4.39
GNB1-207ENST00000472614 SMARCA2P51531 1590 aa42.32■■■■■ 4.37
GNB1-207ENST00000472614 NCAPD3P42695 1498 aa42.3■■■■■ 4.36
GNB1-207ENST00000472614 ATAD2BQ9ULI0 1458 aa42.26■■■■■ 4.36
GNB1-207ENST00000472614 PEG3Q9GZU2 1588 aa42.18■■■■■ 4.34
GNB1-207ENST00000472614 MROH2BQ7Z745 1585 aa42.16■■■■■ 4.34
GNB1-207ENST00000472614 HMGXB3Q12766 1538 aa42.1■■■■■ 4.33
GNB1-207ENST00000472614 BAZ1BQ9UIG0 1483 aaKnown RBP41.95■■■■■ 4.31
GNB1-207ENST00000472614 RSF1Q96T23 1441 aaPredicted RBP41.8■■■■■ 4.28
GNB1-207ENST00000472614 WIZO95785 1651 aa41.68■■■■■ 4.26
GNB1-207ENST00000472614 TOP2AP11388 1531 aaKnown RBP41.39■■■■■ 4.22
GNB1-207ENST00000472614 LAMC3Q9Y6N6 1575 aa41.16■■■■■ 4.18
GNB1-207ENST00000472614 CADPSQ9ULU8 1353 aa41.06■■■■■ 4.16
GNB1-207ENST00000472614 ERCC6Q03468 1493 aa40.99■■■■■ 4.15
GNB1-207ENST00000472614 NESP48681 1621 aa40.99■■■■■ 4.15
GNB1-207ENST00000472614 PDS5BQ9NTI5 1447 aa40.94■■■■■ 4.14
GNB1-207ENST00000472614 CCDC88BA6NC98 1476 aa40.85■■■■■ 4.13
GNB1-207ENST00000472614 CFTRP13569 1480 aa40.83■■■■■ 4.13
GNB1-207ENST00000472614 SUPT5HO00267 1087 aaKnown RBP40.79■■■■■ 4.12
GNB1-207ENST00000472614 CUX2O14529 1486 aa40.58■■■■■ 4.09
GNB1-207ENST00000472614 KIF21AQ7Z4S6 1674 aa40.53■■■■■ 4.08
GNB1-207ENST00000472614 FANCD2Q9BXW9 1451 aa40.53■■■■■ 4.08
GNB1-207ENST00000472614 CEP164Q9UPV0 1460 aa40.51■■■■■ 4.07
GNB1-207ENST00000472614 PRDM2Q13029 1718 aa40.47■■■■■ 4.07
GNB1-207ENST00000472614 THOC2Q8NI27 1593 aaKnown RBP40.43■■■■■ 4.06
GNB1-207ENST00000472614 MRC2Q9UBG0 1479 aa40.41■■■■■ 4.06
GNB1-207ENST00000472614 WDR62O43379 1518 aa40.26■■■■■ 4.03
GNB1-207ENST00000472614 ABCC8Q09428 1581 aa40.1■■■■■ 4.01
GNB1-207ENST00000472614 URB2Q14146 1524 aaKnown RBP40.03■■■■■ 4
GNB1-207ENST00000472614 DNMBPQ6XZF7 1577 aa39.89■■■■□ 3.98
GNB1-207ENST00000472614 TOPBP1Q92547 1522 aa39.87■■■■□ 3.97
GNB1-207ENST00000472614 IFT140Q96RY7 1462 aa39.69■■■■□ 3.94
GNB1-207ENST00000472614 CUX1P39880 1505 aa39.56■■■■□ 3.92
GNB1-207ENST00000472614 POLA1P09884 1462 aaPredicted RBP39.55■■■■□ 3.92
GNB1-207ENST00000472614 WRNQ14191 1432 aaPredicted RBP eCLIP39.48■■■■□ 3.914e-6■□□□□ 10.4
GNB1-207ENST00000472614 FGD5Q6ZNL6 1462 aa39.45■■■■□ 3.91
GNB1-207ENST00000472614 SOGA1O94964 1423 aa39.44■■■■□ 3.9
GNB1-207ENST00000472614 TARBP1Q13395 1621 aaKnown RBP39.39■■■■□ 3.9
GNB1-207ENST00000472614 TOP2BQ02880 1626 aa39.35■■■■□ 3.89
GNB1-207ENST00000472614 WDR97A6NE52 1622 aa39.33■■■■□ 3.89
GNB1-207ENST00000472614 BIVM-ERCC5R4GMW8 1640 aa39.32■■■■□ 3.88
GNB1-207ENST00000472614 ZNF608Q9ULD9 1512 aaPredicted RBP39.3■■■■□ 3.88
GNB1-207ENST00000472614 RAD54L2Q9Y4B4 1467 aa39.28■■■■□ 3.88
GNB1-207ENST00000472614 SYNJ1O43426 1573 aa39.22■■■■□ 3.87
GNB1-207ENST00000472614 EIF4G3O43432 1585 aaKnown RBP39.21■■■■□ 3.87
GNB1-207ENST00000472614 ABCA10Q8WWZ4 1543 aa39.16■■■■□ 3.86
GNB1-207ENST00000472614 AQRO60306 1485 aaKnown RBP eCLIP39.13■■■■□ 3.852e-6■■□□□ 13
GNB1-207ENST00000472614 TDRD9Q8NDG6 1382 aaKnown RBP39.1■■■■□ 3.85
GNB1-207ENST00000472614 DNAJC5Q9H3Z4 198 aa39.09■■■■□ 3.85
GNB1-207ENST00000472614 GRIN2BQ13224 1484 aa38.99■■■■□ 3.83
GNB1-207ENST00000472614 GAPVD1Q14C86 1478 aa38.98■■■■□ 3.83
GNB1-207ENST00000472614 OSCARQ8IYS5 282 aa38.92■■■■□ 3.82
GNB1-207ENST00000472614 MAGI1Q96QZ7 1491 aaPredicted RBP38.92■■■■□ 3.82
GNB1-207ENST00000472614 ABCA5Q8WWZ7 1642 aa38.91■■■■□ 3.82
GNB1-207ENST00000472614 SNAPC4Q5SXM2 1469 aa38.82■■■■□ 3.81
GNB1-207ENST00000472614 PBRM1Q86U86 1689 aa38.78■■■■□ 3.8
GNB1-207ENST00000472614 ERICH3Q5RHP9 1530 aa38.73■■■■□ 3.79
GNB1-207ENST00000472614 CHMP7Q8WUX9 453 aaPredicted RBP38.72■■■■□ 3.79
GNB1-207ENST00000472614 SYNJ2O15056 1496 aa38.72■■■■□ 3.79
GNB1-207ENST00000472614 KIF27Q86VH2 1401 aa38.72■■■■□ 3.79
GNB1-207ENST00000472614 FBLN2P98095 1184 aa38.7■■■■□ 3.79
GNB1-207ENST00000472614 TRIM41Q8WV44 630 aa38.67■■■■□ 3.78
GNB1-207ENST00000472614 CHD1O14646 1710 aa38.62■■■■□ 3.77
GNB1-207ENST00000472614 FHAD1B1AJZ9 1412 aa38.58■■■■□ 3.77
GNB1-207ENST00000472614 ADAMTS12P58397 1594 aa38.53■■■■□ 3.76
GNB1-207ENST00000472614 IGF1RP08069 1367 aa38.44■■■■□ 3.74
GNB1-207ENST00000472614 GRIN2AQ12879 1464 aa38.44■■■■□ 3.74
GNB1-207ENST00000472614 CUL7Q14999 1698 aa38.39■■■■□ 3.74
GNB1-207ENST00000472614 CLASP1Q7Z460 1538 aa38.3■■■■□ 3.72
GNB1-207ENST00000472614 NUP160Q12769 1436 aa38.29■■■■□ 3.72
GNB1-207ENST00000472614 CARMIL1Q5VZK9 1371 aa38.26■■■■□ 3.72
GNB1-207ENST00000472614 CHIC1Q5VXU3 224 aa38.18■■■■□ 3.7
GNB1-207ENST00000472614 EEA1Q15075 1411 aa38.16■■■■□ 3.7
GNB1-207ENST00000472614 ARHGEF11O15085 1522 aa38.16■■■■□ 3.7
GNB1-207ENST00000472614 CEP170Q5SW79 1584 aa38.14■■■■□ 3.7
GNB1-207ENST00000472614 RUSC2Q8N2Y8 1516 aa38.11■■■■□ 3.69
GNB1-207ENST00000472614 RIMBP3CA6NJZ7 1639 aa38.09■■■■□ 3.69
GNB1-207ENST00000472614 RIMBP3BA6NNM3 1639 aa38.09■■■■□ 3.69
GNB1-207ENST00000472614 RIMBP3Q9UFD9 1639 aa38.09■■■■□ 3.69
GNB1-207ENST00000472614 RAPGEF2Q9Y4G8 1499 aa38.06■■■■□ 3.68
GNB1-207ENST00000472614 KIAA0586Q9BVV6 1533 aa38■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms