RNA–Protein interactions for RNA: ENST00000507277.1

UBE2B-206, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 5

Gene UBE2B, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-206ENST00000507277 AEBP2Q6ZN18 517 aaPredicted RBP25.53■■□□□ 1.68
UBE2B-206ENST00000507277 CHIC1Q5VXU3 224 aa24.71■■□□□ 1.55
UBE2B-206ENST00000507277 NISCHQ9Y2I1 1504 aa22.94■■□□□ 1.26
UBE2B-206ENST00000507277 ABCC9O60706 1549 aa21.98■■□□□ 1.11
UBE2B-206ENST00000507277 PHF23Q9BUL5 403 aaPredicted RBP21.73■■□□□ 1.07
UBE2B-206ENST00000507277 SENP3Q9H4L4 574 aaPredicted RBP21.69■■□□□ 1.06
UBE2B-206ENST00000507277 DNAJC5BQ9UF47 199 aa21.54■■□□□ 1.04
UBE2B-206ENST00000507277 CCDC180Q9P1Z9 1646 aa20.89■□□□□ 0.94
UBE2B-206ENST00000507277 DNAJC5Q9H3Z4 198 aa20.45■□□□□ 0.86
UBE2B-206ENST00000507277 RB1CC1Q8TDY2 1594 aa20.42■□□□□ 0.86
UBE2B-206ENST00000507277 PABPN1Q86U42 306 aaKnown RBP eCLIP20.39■□□□□ 0.85
UBE2B-206ENST00000507277 FOXD1Q16676 465 aa20.16■□□□□ 0.82
UBE2B-206ENST00000507277 NACADO15069 1562 aa20.04■□□□□ 0.8
UBE2B-206ENST00000507277 DCAF8L2P0C7V8 631 aa19.97■□□□□ 0.79
UBE2B-206ENST00000507277 PLPPR3Q6T4P5 718 aa19.97■□□□□ 0.79
UBE2B-206ENST00000507277 CECR2Q9BXF3 1484 aa19.89■□□□□ 0.77
UBE2B-206ENST00000507277 UNC13AQ9UPW8 1703 aa19.88■□□□□ 0.77
UBE2B-206ENST00000507277 BICRAQ9NZM4 1560 aa19.87■□□□□ 0.77
UBE2B-206ENST00000507277 CC2D2AQ9P2K1 1620 aa19.75■□□□□ 0.75
UBE2B-206ENST00000507277 EIF4G1Q04637 1599 aaKnown RBP19.47■□□□□ 0.71
UBE2B-206ENST00000507277 SHROOM4Q9ULL8 1493 aa19.46■□□□□ 0.71
UBE2B-206ENST00000507277 MYO15BQ96JP2 1530 aa19.44■□□□□ 0.7
UBE2B-206ENST00000507277 CUX2O14529 1486 aa19.28■□□□□ 0.68
UBE2B-206ENST00000507277 PPP6R1Q9UPN7 881 aa19.26■□□□□ 0.67
UBE2B-206ENST00000507277 ADRA2BP18089 450 aa19.23■□□□□ 0.67
UBE2B-206ENST00000507277 TRIM41Q8WV44 630 aa19.21■□□□□ 0.67
UBE2B-206ENST00000507277 SCRIBQ14160 1630 aa19.07■□□□□ 0.64
UBE2B-206ENST00000507277 ERCC6Q03468 1493 aa19.03■□□□□ 0.64
UBE2B-206ENST00000507277 PIAS4Q8N2W9 510 aaPredicted RBP18.97■□□□□ 0.63
UBE2B-206ENST00000507277 DCAF1Q9Y4B6 1507 aa18.84■□□□□ 0.61
UBE2B-206ENST00000507277 ZCCHC6Q5VYS8 1495 aaKnown RBP18.78■□□□□ 0.6
UBE2B-206ENST00000507277 MSH5O43196 834 aa18.67■□□□□ 0.58
UBE2B-206ENST00000507277 NESP48681 1621 aa18.6■□□□□ 0.57
UBE2B-206ENST00000507277 NCAPD3P42695 1498 aa18.57■□□□□ 0.56
UBE2B-206ENST00000507277 THOC2Q8NI27 1593 aaKnown RBP18.51■□□□□ 0.55
UBE2B-206ENST00000507277 ATAD2BQ9ULI0 1458 aa18.38■□□□□ 0.53
UBE2B-206ENST00000507277 SMARCA2P51531 1590 aa18.38■□□□□ 0.53
UBE2B-206ENST00000507277 OSCARQ8IYS5 282 aa18.35■□□□□ 0.53
UBE2B-206ENST00000507277 HMGXB3Q12766 1538 aa18.28■□□□□ 0.52
UBE2B-206ENST00000507277 LAMC3Q9Y6N6 1575 aa18.25■□□□□ 0.51
UBE2B-206ENST00000507277 PDS5BQ9NTI5 1447 aa18.24■□□□□ 0.51
UBE2B-206ENST00000507277 BAZ1AQ9NRL2 1556 aaPredicted RBP18.24■□□□□ 0.51
UBE2B-206ENST00000507277 KIF21AQ7Z4S6 1674 aa18.24■□□□□ 0.51
UBE2B-206ENST00000507277 BAZ1BQ9UIG0 1483 aaKnown RBP18.14■□□□□ 0.5
UBE2B-206ENST00000507277 TRHP20396 242 aaPredicted RBP18.14■□□□□ 0.49
UBE2B-206ENST00000507277 MRC2Q9UBG0 1479 aa18.11■□□□□ 0.49
UBE2B-206ENST00000507277 RIMBP3CA6NJZ7 1639 aa18.1■□□□□ 0.49
UBE2B-206ENST00000507277 RIMBP3BA6NNM3 1639 aa18.1■□□□□ 0.49
UBE2B-206ENST00000507277 RIMBP3Q9UFD9 1639 aa18.1■□□□□ 0.49
UBE2B-206ENST00000507277 WDR62O43379 1518 aa18.07■□□□□ 0.48
UBE2B-206ENST00000507277 SMARCA4P51532 1647 aa18.06■□□□□ 0.48
UBE2B-206ENST00000507277 CYB5RLQ6IPT4 315 aa18.01■□□□□ 0.47
UBE2B-206ENST00000507277 CADPSQ9ULU8 1353 aa17.99■□□□□ 0.47
UBE2B-206ENST00000507277 ARHGEF11O15085 1522 aa17.97■□□□□ 0.47
UBE2B-206ENST00000507277 PEG3Q9GZU2 1588 aa17.87■□□□□ 0.45
UBE2B-206ENST00000507277 CEP164Q9UPV0 1460 aa17.85■□□□□ 0.45
UBE2B-206ENST00000507277 FANCD2Q9BXW9 1451 aa17.76■□□□□ 0.43
UBE2B-206ENST00000507277 ARAP1Q96P48 1450 aa17.73■□□□□ 0.43
UBE2B-206ENST00000507277 MROH2BQ7Z745 1585 aa17.69■□□□□ 0.42
UBE2B-206ENST00000507277 ILDR1Q86SU0 546 aaPredicted RBP17.67■□□□□ 0.42
UBE2B-206ENST00000507277 URB2Q14146 1524 aaKnown RBP17.67■□□□□ 0.42
UBE2B-206ENST00000507277 ZNF608Q9ULD9 1512 aaPredicted RBP17.63■□□□□ 0.41
UBE2B-206ENST00000507277 PPP4R3CPQ6ZMV5 832 aa17.58■□□□□ 0.4
UBE2B-206ENST00000507277 SCAF1Q9H7N4 1312 aaKnown RBP17.57■□□□□ 0.4
UBE2B-206ENST00000507277 RSF1Q96T23 1441 aaPredicted RBP17.55■□□□□ 0.4
UBE2B-206ENST00000507277 CFTRP13569 1480 aa17.55■□□□□ 0.4
UBE2B-206ENST00000507277 IFT140Q96RY7 1462 aa17.54■□□□□ 0.4
UBE2B-206ENST00000507277 FBLN2P98095 1184 aa17.53■□□□□ 0.4
UBE2B-206ENST00000507277 MAPK8IP2Q13387 824 aaPredicted RBP17.51■□□□□ 0.39
UBE2B-206ENST00000507277 CHD1O14646 1710 aa17.44■□□□□ 0.38
UBE2B-206ENST00000507277 EIF4G3O43432 1585 aaKnown RBP17.41■□□□□ 0.38
UBE2B-206ENST00000507277 WIZO95785 1651 aa17.4■□□□□ 0.38
UBE2B-206ENST00000507277 POTEDQ86YR6 584 aa17.39■□□□□ 0.37
UBE2B-206ENST00000507277 AQRO60306 1485 aaKnown RBP eCLIP17.38■□□□□ 0.371e-7■■■□□ 17.1
UBE2B-206ENST00000507277 TOPBP1Q92547 1522 aa17.31■□□□□ 0.36
UBE2B-206ENST00000507277 DMRT2Q9Y5R5 561 aa17.28■□□□□ 0.36
UBE2B-206ENST00000507277 CLASP1Q7Z460 1538 aa17.25■□□□□ 0.35
UBE2B-206ENST00000507277 CHMP7Q8WUX9 453 aaPredicted RBP17.22■□□□□ 0.35
UBE2B-206ENST00000507277 GAPVD1Q14C86 1478 aa17.2■□□□□ 0.34
UBE2B-206ENST00000507277 KDM4FA0A1W2PPD8 638 aa17.2■□□□□ 0.34
UBE2B-206ENST00000507277 ABCC8Q09428 1581 aa17.19■□□□□ 0.34
UBE2B-206ENST00000507277 TARBP1Q13395 1621 aaKnown RBP17.18■□□□□ 0.34
UBE2B-206ENST00000507277 SYNJ1O43426 1573 aa17.16■□□□□ 0.34
UBE2B-206ENST00000507277 PRDM2Q13029 1718 aa17.15■□□□□ 0.34
UBE2B-206ENST00000507277 TDRD9Q8NDG6 1382 aaKnown RBP17.15■□□□□ 0.34
UBE2B-206ENST00000507277 CNKSR2Q8WXI2 1034 aa17.13■□□□□ 0.33
UBE2B-206ENST00000507277 SNAPC4Q5SXM2 1469 aa17.12■□□□□ 0.33
UBE2B-206ENST00000507277 DNMBPQ6XZF7 1577 aa17.12■□□□□ 0.33
UBE2B-206ENST00000507277 TOP2AP11388 1531 aaKnown RBP17.1■□□□□ 0.33
UBE2B-206ENST00000507277 POLA1P09884 1462 aaPredicted RBP17.07■□□□□ 0.32
UBE2B-206ENST00000507277 RAD54L2Q9Y4B4 1467 aa17.07■□□□□ 0.32
UBE2B-206ENST00000507277 NCBP3Q53F19 620 aaKnown RBP17.05■□□□□ 0.32
UBE2B-206ENST00000507277 SOGA1O94964 1423 aa17.03■□□□□ 0.32
UBE2B-206ENST00000507277 MAGI1Q96QZ7 1491 aaPredicted RBP17.02■□□□□ 0.32
UBE2B-206ENST00000507277 SYNJ2O15056 1496 aa16.99■□□□□ 0.31
UBE2B-206ENST00000507277 CCDC88BA6NC98 1476 aa16.98■□□□□ 0.31
UBE2B-206ENST00000507277 KIF13AQ9H1H9 1805 aa16.98■□□□□ 0.31
UBE2B-206ENST00000507277 FAM69CQ0P6D2 419 aa16.96■□□□□ 0.31
UBE2B-206ENST00000507277 ERCC6L2Q5T890 1561 aa16.95■□□□□ 0.3
UBE2B-206ENST00000507277 GRIN2BQ13224 1484 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms