Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IFNA1P01562 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IFNA1P01562 GABARAPL3-202ENST00000624044 1851 ntBASIC16.78■□□□□ 0.28
IFNA1P01562 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFNA1P01562 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFNA1P01562 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IFNA1P01562 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
IFNA1P01562 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC16.78■□□□□ 0.28
IFNA1P01562 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.78■□□□□ 0.28
IFNA1P01562 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFNA1P01562 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IFNA1P01562 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFNA1P01562 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC16.78■□□□□ 0.28
IFNA1P01562 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC16.78■□□□□ 0.28
IFNA1P01562 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFNA1P01562 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFNA1P01562 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IFNA1P01562 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFNA1P01562 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IFNA1P01562 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFNA1P01562 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IFNA1P01562 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC16.77■□□□□ 0.28
IFNA1P01562 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.77■□□□□ 0.28
IFNA1P01562 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
IFNA1P01562 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.77■□□□□ 0.28
IFNA1P01562 BCL2-203ENST00000589955 5011 ntBASIC16.77■□□□□ 0.28
IFNA1P01562 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IFNA1P01562 MACF1-219ENST00000484793 834 ntTSL 2 BASIC16.77■□□□□ 0.28
IFNA1P01562 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC16.77■□□□□ 0.28
IFNA1P01562 AC022413.1-201ENST00000624602 984 ntBASIC16.77■□□□□ 0.28
IFNA1P01562 GAK-223ENST00000628912 497 ntTSL 5 BASIC16.77■□□□□ 0.28
IFNA1P01562 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC16.77■□□□□ 0.28
IFNA1P01562 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
IFNA1P01562 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IFNA1P01562 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
IFNA1P01562 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
IFNA1P01562 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
IFNA1P01562 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
IFNA1P01562 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
IFNA1P01562 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.76■□□□□ 0.27
IFNA1P01562 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IFNA1P01562 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.76■□□□□ 0.27
IFNA1P01562 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
IFNA1P01562 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
IFNA1P01562 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IFNA1P01562 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.76■□□□□ 0.27
IFNA1P01562 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IFNA1P01562 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
IFNA1P01562 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
IFNA1P01562 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IFNA1P01562 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IFNA1P01562 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.76■□□□□ 0.27
IFNA1P01562 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IFNA1P01562 AL391422.3-201ENST00000603791 2761 ntBASIC16.76■□□□□ 0.27
IFNA1P01562 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IFNA1P01562 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
IFNA1P01562 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
IFNA1P01562 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
IFNA1P01562 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IFNA1P01562 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
IFNA1P01562 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
IFNA1P01562 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
IFNA1P01562 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFNA1P01562 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.75■□□□□ 0.27
IFNA1P01562 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.75■□□□□ 0.27
IFNA1P01562 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
IFNA1P01562 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
IFNA1P01562 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFNA1P01562 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.75■□□□□ 0.27
IFNA1P01562 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFNA1P01562 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFNA1P01562 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFNA1P01562 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.75■□□□□ 0.27
IFNA1P01562 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.75■□□□□ 0.27
IFNA1P01562 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
IFNA1P01562 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.74■□□□□ 0.27
IFNA1P01562 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFNA1P01562 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFNA1P01562 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFNA1P01562 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFNA1P01562 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
IFNA1P01562 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFNA1P01562 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFNA1P01562 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.74■□□□□ 0.27
IFNA1P01562 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFNA1P01562 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC16.74■□□□□ 0.27
IFNA1P01562 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFNA1P01562 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFNA1P01562 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFNA1P01562 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC16.74■□□□□ 0.27
IFNA1P01562 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFNA1P01562 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFNA1P01562 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFNA1P01562 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFNA1P01562 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFNA1P01562 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.74■□□□□ 0.27
IFNA1P01562 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFNA1P01562 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFNA1P01562 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFNA1P01562 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms