Protein–RNA interactions for Protein: O60291

MGRN1, E3 ubiquitin-protein ligase MGRN1, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MGRN1O60291 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
MGRN1O60291 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MGRN1O60291 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
MGRN1O60291 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
MGRN1O60291 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.65■□□□□ 0.9
MGRN1O60291 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MGRN1O60291 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
MGRN1O60291 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
MGRN1O60291 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MGRN1O60291 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.65■□□□□ 0.9
MGRN1O60291 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MGRN1O60291 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MGRN1O60291 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MGRN1O60291 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
MGRN1O60291 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
MGRN1O60291 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.64■□□□□ 0.9
MGRN1O60291 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.64■□□□□ 0.9
MGRN1O60291 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
MGRN1O60291 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
MGRN1O60291 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MGRN1O60291 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
MGRN1O60291 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.64■□□□□ 0.89
MGRN1O60291 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MGRN1O60291 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MGRN1O60291 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MGRN1O60291 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MGRN1O60291 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MGRN1O60291 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.63■□□□□ 0.89
MGRN1O60291 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MGRN1O60291 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
MGRN1O60291 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MGRN1O60291 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MGRN1O60291 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
MGRN1O60291 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.63■□□□□ 0.89
MGRN1O60291 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
MGRN1O60291 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MGRN1O60291 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.63■□□□□ 0.89
MGRN1O60291 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MGRN1O60291 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.63■□□□□ 0.89
MGRN1O60291 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.63■□□□□ 0.89
MGRN1O60291 AL049796.1-201ENST00000565336 1766 ntBASIC20.63■□□□□ 0.89
MGRN1O60291 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
MGRN1O60291 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.63■□□□□ 0.89
MGRN1O60291 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
MGRN1O60291 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.63■□□□□ 0.89
MGRN1O60291 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MGRN1O60291 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
MGRN1O60291 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
MGRN1O60291 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MGRN1O60291 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
MGRN1O60291 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MGRN1O60291 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MGRN1O60291 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.62■□□□□ 0.89
MGRN1O60291 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MGRN1O60291 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.62■□□□□ 0.89
MGRN1O60291 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MGRN1O60291 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MGRN1O60291 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MGRN1O60291 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
MGRN1O60291 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.62■□□□□ 0.89
MGRN1O60291 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.62■□□□□ 0.89
MGRN1O60291 BHLHE23-202ENST00000612929 1109 ntBASIC20.62■□□□□ 0.89
MGRN1O60291 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
MGRN1O60291 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MGRN1O60291 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.62■□□□□ 0.89
MGRN1O60291 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
MGRN1O60291 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
MGRN1O60291 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.62■□□□□ 0.89
MGRN1O60291 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.62■□□□□ 0.89
MGRN1O60291 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
MGRN1O60291 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MGRN1O60291 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MGRN1O60291 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
MGRN1O60291 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MGRN1O60291 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MGRN1O60291 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
MGRN1O60291 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
MGRN1O60291 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
MGRN1O60291 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MGRN1O60291 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MGRN1O60291 CA15P2-201ENST00000611168 834 ntBASIC20.61■□□□□ 0.89
MGRN1O60291 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
MGRN1O60291 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.61■□□□□ 0.89
MGRN1O60291 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.61■□□□□ 0.89
MGRN1O60291 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
MGRN1O60291 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.61■□□□□ 0.89
MGRN1O60291 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MGRN1O60291 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.61■□□□□ 0.89
MGRN1O60291 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MGRN1O60291 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
MGRN1O60291 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MGRN1O60291 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MGRN1O60291 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.6■□□□□ 0.89
MGRN1O60291 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.6■□□□□ 0.89
MGRN1O60291 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MGRN1O60291 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.6■□□□□ 0.89
MGRN1O60291 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MGRN1O60291 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.6■□□□□ 0.89
MGRN1O60291 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
MGRN1O60291 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms