Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CYSTM1Q9H1C7 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC12.49□□□□□ -0.41
CYSTM1Q9H1C7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CYSTM1Q9H1C7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CYSTM1Q9H1C7 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CYSTM1Q9H1C7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC12.49□□□□□ -0.41
CYSTM1Q9H1C7 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
CYSTM1Q9H1C7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CYSTM1Q9H1C7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CYSTM1Q9H1C7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CYSTM1Q9H1C7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC12.48□□□□□ -0.41
CYSTM1Q9H1C7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CYSTM1Q9H1C7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CYSTM1Q9H1C7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CYSTM1Q9H1C7 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CYSTM1Q9H1C7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CYSTM1Q9H1C7 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CYSTM1Q9H1C7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC12.48□□□□□ -0.41
CYSTM1Q9H1C7 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CYSTM1Q9H1C7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CYSTM1Q9H1C7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC12.48□□□□□ -0.41
CYSTM1Q9H1C7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC12.48□□□□□ -0.41
CYSTM1Q9H1C7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CYSTM1Q9H1C7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CYSTM1Q9H1C7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CYSTM1Q9H1C7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CYSTM1Q9H1C7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CYSTM1Q9H1C7 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CYSTM1Q9H1C7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CYSTM1Q9H1C7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CYSTM1Q9H1C7 AC046158.3-201ENST00000624947 2558 ntBASIC12.47□□□□□ -0.41
CYSTM1Q9H1C7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CYSTM1Q9H1C7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC12.47□□□□□ -0.41
CYSTM1Q9H1C7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC12.47□□□□□ -0.41
CYSTM1Q9H1C7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CYSTM1Q9H1C7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC12.47□□□□□ -0.41
CYSTM1Q9H1C7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CYSTM1Q9H1C7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC12.47□□□□□ -0.41
CYSTM1Q9H1C7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CYSTM1Q9H1C7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CYSTM1Q9H1C7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
CYSTM1Q9H1C7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CYSTM1Q9H1C7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CYSTM1Q9H1C7 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CYSTM1Q9H1C7 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CYSTM1Q9H1C7 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
CYSTM1Q9H1C7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CYSTM1Q9H1C7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CYSTM1Q9H1C7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CYSTM1Q9H1C7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CYSTM1Q9H1C7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC12.47□□□□□ -0.41
CYSTM1Q9H1C7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC12.46□□□□□ -0.41
CYSTM1Q9H1C7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
CYSTM1Q9H1C7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
CYSTM1Q9H1C7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
CYSTM1Q9H1C7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CYSTM1Q9H1C7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CYSTM1Q9H1C7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.41
CYSTM1Q9H1C7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CYSTM1Q9H1C7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CYSTM1Q9H1C7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC12.46□□□□□ -0.41
CYSTM1Q9H1C7 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC12.46□□□□□ -0.41
CYSTM1Q9H1C7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CYSTM1Q9H1C7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CYSTM1Q9H1C7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
CYSTM1Q9H1C7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
CYSTM1Q9H1C7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CYSTM1Q9H1C7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
CYSTM1Q9H1C7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
CYSTM1Q9H1C7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CYSTM1Q9H1C7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CYSTM1Q9H1C7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CYSTM1Q9H1C7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
CYSTM1Q9H1C7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CYSTM1Q9H1C7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC12.46□□□□□ -0.42
CYSTM1Q9H1C7 AC124067.4-201ENST00000519691 2379 ntBASIC12.45□□□□□ -0.42
CYSTM1Q9H1C7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CYSTM1Q9H1C7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CYSTM1Q9H1C7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CYSTM1Q9H1C7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CYSTM1Q9H1C7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC12.45□□□□□ -0.42
CYSTM1Q9H1C7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
CYSTM1Q9H1C7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CYSTM1Q9H1C7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC12.45□□□□□ -0.42
CYSTM1Q9H1C7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
CYSTM1Q9H1C7 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CYSTM1Q9H1C7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC12.45□□□□□ -0.42
CYSTM1Q9H1C7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CYSTM1Q9H1C7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CYSTM1Q9H1C7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
CYSTM1Q9H1C7 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC12.45□□□□□ -0.42
CYSTM1Q9H1C7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC12.45□□□□□ -0.42
CYSTM1Q9H1C7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC12.45□□□□□ -0.42
CYSTM1Q9H1C7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CYSTM1Q9H1C7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CYSTM1Q9H1C7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CYSTM1Q9H1C7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CYSTM1Q9H1C7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CYSTM1Q9H1C7 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC12.44□□□□□ -0.42
CYSTM1Q9H1C7 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms