Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HIST3H2BBQ8N257 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.96■□□□□ 0.15
HIST3H2BBQ8N257 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
HIST3H2BBQ8N257 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC15.96■□□□□ 0.15
HIST3H2BBQ8N257 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC15.96■□□□□ 0.15
HIST3H2BBQ8N257 OXCT2P1-201ENST00000447263 1535 ntBASIC15.96■□□□□ 0.15
HIST3H2BBQ8N257 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HIST3H2BBQ8N257 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HIST3H2BBQ8N257 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC15.96■□□□□ 0.15
HIST3H2BBQ8N257 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HIST3H2BBQ8N257 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HIST3H2BBQ8N257 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
HIST3H2BBQ8N257 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC15.96■□□□□ 0.15
HIST3H2BBQ8N257 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
HIST3H2BBQ8N257 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HIST3H2BBQ8N257 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HIST3H2BBQ8N257 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
HIST3H2BBQ8N257 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HIST3H2BBQ8N257 AL359258.2-201ENST00000564063 1566 ntBASIC15.96■□□□□ 0.14
HIST3H2BBQ8N257 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
HIST3H2BBQ8N257 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
HIST3H2BBQ8N257 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HIST3H2BBQ8N257 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HIST3H2BBQ8N257 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC15.95■□□□□ 0.14
HIST3H2BBQ8N257 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HIST3H2BBQ8N257 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HIST3H2BBQ8N257 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HIST3H2BBQ8N257 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
HIST3H2BBQ8N257 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
HIST3H2BBQ8N257 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
HIST3H2BBQ8N257 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC15.95■□□□□ 0.14
HIST3H2BBQ8N257 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC15.95■□□□□ 0.14
HIST3H2BBQ8N257 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HIST3H2BBQ8N257 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
HIST3H2BBQ8N257 FZD10-202ENST00000539839 3282 ntBASIC15.95■□□□□ 0.14
HIST3H2BBQ8N257 MIR6090-201ENST00000622481 60 ntBASIC15.95■□□□□ 0.14
HIST3H2BBQ8N257 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HIST3H2BBQ8N257 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC15.95■□□□□ 0.14
HIST3H2BBQ8N257 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
HIST3H2BBQ8N257 AL353803.4-201ENST00000565882 1934 ntBASIC15.95■□□□□ 0.14
HIST3H2BBQ8N257 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC15.95■□□□□ 0.14
HIST3H2BBQ8N257 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
HIST3H2BBQ8N257 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC15.95■□□□□ 0.14
HIST3H2BBQ8N257 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HIST3H2BBQ8N257 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
HIST3H2BBQ8N257 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HIST3H2BBQ8N257 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC15.95■□□□□ 0.14
HIST3H2BBQ8N257 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.94■□□□□ 0.14
HIST3H2BBQ8N257 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC15.94■□□□□ 0.14
HIST3H2BBQ8N257 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC15.94■□□□□ 0.14
HIST3H2BBQ8N257 EI24-204ENST00000527235 1625 ntTSL 5 BASIC15.94■□□□□ 0.14
HIST3H2BBQ8N257 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HIST3H2BBQ8N257 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HIST3H2BBQ8N257 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HIST3H2BBQ8N257 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HIST3H2BBQ8N257 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HIST3H2BBQ8N257 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC15.94■□□□□ 0.14
HIST3H2BBQ8N257 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC15.94■□□□□ 0.14
HIST3H2BBQ8N257 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HIST3H2BBQ8N257 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HIST3H2BBQ8N257 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HIST3H2BBQ8N257 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC15.94■□□□□ 0.14
HIST3H2BBQ8N257 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HIST3H2BBQ8N257 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HIST3H2BBQ8N257 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
HIST3H2BBQ8N257 AC112907.3-201ENST00000577781 2400 ntBASIC15.94■□□□□ 0.14
HIST3H2BBQ8N257 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
HIST3H2BBQ8N257 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC15.94■□□□□ 0.14
HIST3H2BBQ8N257 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIST3H2BBQ8N257 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIST3H2BBQ8N257 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.93■□□□□ 0.14
HIST3H2BBQ8N257 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.93■□□□□ 0.14
HIST3H2BBQ8N257 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIST3H2BBQ8N257 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIST3H2BBQ8N257 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIST3H2BBQ8N257 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC15.93■□□□□ 0.14
HIST3H2BBQ8N257 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIST3H2BBQ8N257 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC15.93■□□□□ 0.14
HIST3H2BBQ8N257 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
HIST3H2BBQ8N257 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIST3H2BBQ8N257 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIST3H2BBQ8N257 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HIST3H2BBQ8N257 AL032819.2-201ENST00000624543 2162 ntBASIC15.93■□□□□ 0.14
HIST3H2BBQ8N257 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
HIST3H2BBQ8N257 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC15.93■□□□□ 0.14
HIST3H2BBQ8N257 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIST3H2BBQ8N257 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIST3H2BBQ8N257 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
HIST3H2BBQ8N257 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
HIST3H2BBQ8N257 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HIST3H2BBQ8N257 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIST3H2BBQ8N257 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIST3H2BBQ8N257 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIST3H2BBQ8N257 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIST3H2BBQ8N257 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIST3H2BBQ8N257 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
HIST3H2BBQ8N257 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIST3H2BBQ8N257 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIST3H2BBQ8N257 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIST3H2BBQ8N257 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms