Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 STT3A-216ENST00000534472 1561 ntTSL 1 (best)19.02■□□□□ 0.636e-10■■■■□ 19.8
SND1Q7KZF4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.18■□□□□ 0.823e-9■■■■□ 19.8
SND1Q7KZF4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.643e-9■■■■□ 19.8
SND1Q7KZF4 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.163e-9■■■■□ 19.8
SND1Q7KZF4 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC7.29□□□□□ -1.243e-9■■■■□ 19.8
SND1Q7KZF4 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.69□□□□□ -1.983e-9■■■■□ 19.8
SND1Q7KZF4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.98■□□□□ 0.791e-6■■■■□ 19.8
SND1Q7KZF4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.95■□□□□ 0.781e-6■■■■□ 19.8
SND1Q7KZF4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.491e-6■■■■□ 19.8
SND1Q7KZF4 CD276-210ENST00000560928 2181 ntTSL 215.69■□□□□ 0.11e-6■■■■□ 19.8
SND1Q7KZF4 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.071e-6■■■■□ 19.8
SND1Q7KZF4 CD276-217ENST00000564751 951 ntTSL 1 (best) BASIC12.88□□□□□ -0.351e-6■■■■□ 19.8
SND1Q7KZF4 CD320-203ENST00000596002 1729 ntTSL 1 (best)19.68■□□□□ 0.744e-8■■■■□ 19.8
SND1Q7KZF4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.97■□□□□ 0.634e-8■■■■□ 19.8
SND1Q7KZF4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.594e-8■■■■□ 19.8
SND1Q7KZF4 CD320-206ENST00000599573 861 ntTSL 217.94■□□□□ 0.464e-8■■■■□ 19.8
SND1Q7KZF4 SLC38A5-202ENST00000416711 708 ntTSL 513.28□□□□□ -0.289e-14■■■■□ 19.8
SND1Q7KZF4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.65■■□□□ 1.221e-6■■■■□ 19.8
SND1Q7KZF4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.94■■□□□ 1.11e-6■■■■□ 19.8
SND1Q7KZF4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.571e-6■■■■□ 19.8
SND1Q7KZF4 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.482e-6■■■■□ 19.8
SND1Q7KZF4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.27■□□□□ 0.362e-6■■■■□ 19.8
SND1Q7KZF4 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.11e-6■■■■□ 19.8
SND1Q7KZF4 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.81□□□□□ -0.041e-6■■■■□ 19.8
SND1Q7KZF4 SLC41A3-208ENST00000506102 2351 ntTSL 212.87□□□□□ -0.351e-6■■■■□ 19.8
SND1Q7KZF4 TMEM97-204ENST00000582384 1075 ntTSL 312.49□□□□□ -0.412e-6■■■■□ 19.8
SND1Q7KZF4 CLCN5-203ENST00000376091 3046 ntTSL 2 BASIC12.48□□□□□ -0.411e-6■■■■□ 19.8
SND1Q7KZF4 TMEM97-202ENST00000336687 2115 ntTSL 1 (best) BASIC11.81□□□□□ -0.524e-6■■■■□ 19.8
SND1Q7KZF4 SLC41A3-216ENST00000512557 3828 ntTSL 29.79□□□□□ -0.841e-6■■■■□ 19.8
SND1Q7KZF4 CLCN5-204ENST00000376108 2660 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.851e-6■■■■□ 19.8
SND1Q7KZF4 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.21e-6■■■■□ 19.8
SND1Q7KZF4 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.84□□□□□ -1.471e-6■■■■□ 19.8
SND1Q7KZF4 NAGPA-215ENST00000569296 866 ntTSL 517.64■□□□□ 0.413e-7■■■■□ 19.7
SND1Q7KZF4 NAGPA-210ENST00000565876 544 ntTSL 414.64□□□□□ -0.073e-7■■■■□ 19.7
SND1Q7KZF4 MOGS-207ENST00000462443 532 ntTSL 219.11■□□□□ 0.651e-7■■■■□ 19.7
SND1Q7KZF4 HSD17B2-206ENST00000569351 1302 ntTSL 210.58□□□□□ -0.712e-6■■■■□ 19.7
SND1Q7KZF4 HSD17B2-202ENST00000563491 487 ntTSL 39.64□□□□□ -0.872e-6■■■■□ 19.7
SND1Q7KZF4 HSD17B2-203ENST00000566213 551 ntTSL 38.37□□□□□ -1.072e-6■■■■□ 19.7
SND1Q7KZF4 MCAM-205ENST00000526190 555 ntTSL 417.99■□□□□ 0.471e-7■■■■□ 19.7
SND1Q7KZF4 MCAM-207ENST00000528502 478 ntTSL 417.99■□□□□ 0.471e-7■■■■□ 19.7
SND1Q7KZF4 MCAM-216ENST00000530937 588 ntTSL 417.89■□□□□ 0.451e-7■■■■□ 19.7
SND1Q7KZF4 MCAM-212ENST00000529686 563 ntTSL 416.54■□□□□ 0.241e-7■■■■□ 19.7
SND1Q7KZF4 MCAM-213ENST00000530006 562 ntTSL 215.39■□□□□ 0.051e-7■■■■□ 19.7
SND1Q7KZF4 ADGRG1-266ENST00000568908 3852 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.314e-6■■■■□ 19.7
SND1Q7KZF4 ADGRG1-214ENST00000562558 3858 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.424e-6■■■■□ 19.7
SND1Q7KZF4 ADGRG1-267ENST00000568909 4254 ntAPPRIS P4 TSL 5 BASIC12.07□□□□□ -0.484e-6■■■■□ 19.7
SND1Q7KZF4 ADGRG1-239ENST00000565539 2688 ntTSL 211.21□□□□□ -0.614e-6■■■■□ 19.7
SND1Q7KZF4 ADGRG1-201ENST00000388813 3925 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.624e-6■■■■□ 19.7
SND1Q7KZF4 ADGRG1-216ENST00000562631 4042 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.654e-6■■■■□ 19.7
SND1Q7KZF4 ADGRG1-203ENST00000540164 3820 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.684e-6■■■■□ 19.7
SND1Q7KZF4 ADGRG1-255ENST00000567835 3741 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.724e-6■■■■□ 19.7
SND1Q7KZF4 ADGRG1-202ENST00000456916 3860 ntTSL 2 BASIC10.03□□□□□ -0.84e-6■■■■□ 19.7
SND1Q7KZF4 ADGRG1-232ENST00000564907 3655 ntTSL 59.83□□□□□ -0.844e-6■■■■□ 19.7
SND1Q7KZF4 SLC3A2-209ENST00000537508 583 ntTSL 29.73□□□□□ -0.851e-14■■■■□ 19.7
SND1Q7KZF4 SLC5A6-214ENST00000464538 664 ntTSL 420.37■□□□□ 0.854e-12■■■■□ 19.7
SND1Q7KZF4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.054e-7■■■■□ 19.7
SND1Q7KZF4 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.294e-7■■■■□ 19.7
SND1Q7KZF4 TMEM41B-201ENST00000299596 1443 ntTSL 1 (best)14.31□□□□□ -0.124e-7■■■■□ 19.7
SND1Q7KZF4 TMEM41B-202ENST00000524543 3848 ntTSL 213.23□□□□□ -0.294e-7■■■■□ 19.7
SND1Q7KZF4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.63■□□□□ 0.892e-6■■■■□ 19.7
SND1Q7KZF4 DOLPP1-201ENST00000327812 1932 ntTSL 1 (best)18.98■□□□□ 0.632e-6■■■■□ 19.7
SND1Q7KZF4 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.492e-6■■■■□ 19.7
SND1Q7KZF4 DOLPP1-204ENST00000412363 911 ntTSL 517.49■□□□□ 0.392e-6■■■■□ 19.7
SND1Q7KZF4 MASP1-215ENST00000495249 587 ntTSL 410□□□□□ -0.816e-10■■■■□ 19.7
SND1Q7KZF4 LGMN-219ENST00000557725 741 ntTSL 211.99□□□□□ -0.495e-7■■■■□ 19.7
SND1Q7KZF4 TMEM87A-208ENST00000566014 583 ntTSL 54.81□□□□□ -1.641e-6■■■■□ 19.7
SND1Q7KZF4 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.116e-7■■■■□ 19.7
SND1Q7KZF4 HMGCS1-202ENST00000433297 3466 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.326e-7■■■■□ 19.7
SND1Q7KZF4 NCSTN-209ENST00000459963 1246 ntTSL 58.37□□□□□ -1.075e-7■■■■□ 19.7
SND1Q7KZF4 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.23□□□□□ -1.579e-19■■■■□ 19.7
SND1Q7KZF4 HERPUD1-214ENST00000568651 458 ntTSL 310.77□□□□□ -0.694e-8■■■■□ 19.7
SND1Q7KZF4 HERPUD1-208ENST00000563911 844 ntTSL 39.6□□□□□ -0.874e-8■■■■□ 19.7
SND1Q7KZF4 HERPUD1-213ENST00000568358 751 ntTSL 55.77□□□□□ -1.494e-8■■■■□ 19.7
SND1Q7KZF4 CARS-206ENST00000465240 658 ntTSL 213□□□□□ -0.331e-6■■■■□ 19.7
SND1Q7KZF4 LAMB1-203ENST00000393560 2806 ntTSL 1 (best) BASIC12.46□□□□□ -0.423e-7■■■■□ 19.7
SND1Q7KZF4 CRLF1-203ENST00000594325 1020 ntTSL 323.57■■□□□ 1.363e-18■■■■□ 19.6
SND1Q7KZF4 SERPING1-209ENST00000530113 908 ntTSL 212.42□□□□□ -0.427e-8■■■■□ 19.6
SND1Q7KZF4 SDF2-206ENST00000587788 444 ntTSL 36.46□□□□□ -1.385e-8■■■■□ 19.6
SND1Q7KZF4 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.07■□□□□ 0.322e-6■■■■□ 19.6
SND1Q7KZF4 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC16.16■□□□□ 0.182e-6■■■■□ 19.6
SND1Q7KZF4 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC14.69□□□□□ -0.062e-6■■■■□ 19.6
SND1Q7KZF4 ATP6V0A1-205ENST00000544137 3047 ntTSL 1 (best) BASIC12.8□□□□□ -0.362e-6■■■■□ 19.6
SND1Q7KZF4 ATP6V0A1-201ENST00000264649 4110 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.742e-6■■■■□ 19.6
SND1Q7KZF4 ATP6V0A1-202ENST00000343619 4128 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.82e-6■■■■□ 19.6
SND1Q7KZF4 NRP1-208ENST00000395995 5826 ntTSL 1 (best) BASIC12.82□□□□□ -0.362e-6■■■■□ 19.6
SND1Q7KZF4 NRP1-201ENST00000265371 5882 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.362e-6■■■■□ 19.6
SND1Q7KZF4 NRP1-206ENST00000374867 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.412e-6■■■■□ 19.6
SND1Q7KZF4 NRP1-207ENST00000374875 5407 ntTSL 1 (best) BASIC10.43□□□□□ -0.742e-6■■■■□ 19.6
SND1Q7KZF4 CTSZ-202ENST00000472025 564 ntTSL 220.12■□□□□ 0.814e-14■■■■□ 19.6
SND1Q7KZF4 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC15.21■□□□□ 0.029e-7■■■■□ 19.6
SND1Q7KZF4 MANBA-201ENST00000226578 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.39e-7■■■■□ 19.6
SND1Q7KZF4 HEPACAM2-203ENST00000440868 2060 ntTSL 1 (best) BASIC9.77□□□□□ -0.851e-9■■■■□ 19.6
SND1Q7KZF4 HEPACAM2-204ENST00000453812 1869 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.91e-9■■■■□ 19.6
SND1Q7KZF4 MANBA-207ENST00000514430 7444 ntTSL 29.35□□□□□ -0.919e-7■■■■□ 19.6
SND1Q7KZF4 HEPACAM2-202ENST00000394468 2148 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.021e-9■■■■□ 19.6
SND1Q7KZF4 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.161e-9■■■■□ 19.6
SND1Q7KZF4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.59■■□□□ 1.053e-8■■■■□ 19.6
SND1Q7KZF4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.053e-8■■■■□ 19.6
SND1Q7KZF4 HMGCS1-207ENST00000514610 555 ntTSL 29.27□□□□□ -0.932e-18■■■■□ 19.6
SND1Q7KZF4 PHGDH-214ENST00000641314 1558 nt18.31■□□□□ 0.521e-7■■■■□ 19.6
Retrieved 100 of 13,567 protein–RNA pairs in 79.5 ms