RNA–Protein interactions for RNA: ENST00000566014.1

TMEM87A-208, Transcript of transmembrane protein 87A, humanhuman

TSL 5

Gene TMEM87A, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87A-208ENST00000566014 AEBP2Q6ZN18 517 aaPredicted RBP21.99■■□□□ 1.11
TMEM87A-208ENST00000566014 CHIC1Q5VXU3 224 aa20.83■□□□□ 0.93
TMEM87A-208ENST00000566014 SENP3Q9H4L4 574 aaPredicted RBP18.92■□□□□ 0.62
TMEM87A-208ENST00000566014 PHF23Q9BUL5 403 aaPredicted RBP18.58■□□□□ 0.56
TMEM87A-208ENST00000566014 FOXD1Q16676 465 aa17.56■□□□□ 0.4
TMEM87A-208ENST00000566014 PLPPR3Q6T4P5 718 aa16.62■□□□□ 0.25
TMEM87A-208ENST00000566014 MSH5O43196 834 aa16.61■□□□□ 0.25
TMEM87A-208ENST00000566014 PIAS4Q8N2W9 510 aaPredicted RBP16.4■□□□□ 0.22
TMEM87A-208ENST00000566014 POTEDQ86YR6 584 aa16.35■□□□□ 0.21
TMEM87A-208ENST00000566014 PPP6R1Q9UPN7 881 aa16.25■□□□□ 0.19
TMEM87A-208ENST00000566014 ADRA2BP18089 450 aa16.2■□□□□ 0.18
TMEM87A-208ENST00000566014 SCAF1Q9H7N4 1312 aaKnown RBP15□□□□□ -0.01
TMEM87A-208ENST00000566014 DMRT2Q9Y5R5 561 aa14.95□□□□□ -0.02
TMEM87A-208ENST00000566014 MAPK8IP2Q13387 824 aaPredicted RBP14.9□□□□□ -0.02
TMEM87A-208ENST00000566014 PPP4R3CPQ6ZMV5 832 aa14.5□□□□□ -0.09
TMEM87A-208ENST00000566014 HOXD11P31277 338 aaPredicted RBP14.35□□□□□ -0.11
TMEM87A-208ENST00000566014 DCAF8L1A6NGE4 600 aa14.31□□□□□ -0.12
TMEM87A-208ENST00000566014 CNKSR2Q8WXI2 1034 aa14.31□□□□□ -0.12
TMEM87A-208ENST00000566014 CACNB1Q02641 598 aaPredicted RBP14.28□□□□□ -0.12
TMEM87A-208ENST00000566014 RNF216Q9NWF9 866 aaPredicted RBP14.22□□□□□ -0.13
TMEM87A-208ENST00000566014 RNF39Q9H2S5 420 aa14.1□□□□□ -0.15
TMEM87A-208ENST00000566014 NCBP3Q53F19 620 aaKnown RBP13.99□□□□□ -0.17
TMEM87A-208ENST00000566014 DNAJC5BQ9UF47 199 aa13.99□□□□□ -0.17
TMEM87A-208ENST00000566014 C1QBPQ07021 282 aaKnown RBP13.94□□□□□ -0.18
TMEM87A-208ENST00000566014 DNAJC5Q9H3Z4 198 aa13.93□□□□□ -0.18
TMEM87A-208ENST00000566014 NPM3O75607 178 aaKnown RBP13.67□□□□□ -0.22
TMEM87A-208ENST00000566014 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.67□□□□□ -0.22
TMEM87A-208ENST00000566014 ABCC9O60706 1549 aa13.33□□□□□ -0.28
TMEM87A-208ENST00000566014 U3KPZ7 1027 aaPredicted RBP13.32□□□□□ -0.28
TMEM87A-208ENST00000566014 KCNA4P22459 653 aa13.24□□□□□ -0.29
TMEM87A-208ENST00000566014 CAPN15O75808 1086 aa13.18□□□□□ -0.3
TMEM87A-208ENST00000566014 DSG3P32926 999 aa13.13□□□□□ -0.31
TMEM87A-208ENST00000566014 SPINK5Q9NQ38 1064 aaPredicted RBP13.13□□□□□ -0.31
TMEM87A-208ENST00000566014 APLP2Q06481 763 aa13.11□□□□□ -0.31
TMEM87A-208ENST00000566014 SLC4A2P04920 1241 aa13.07□□□□□ -0.32
TMEM87A-208ENST00000566014 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.04□□□□□ -0.32
TMEM87A-208ENST00000566014 HNRNPUL2Q1KMD3 747 aaKnown RBP13.04□□□□□ -0.32
TMEM87A-208ENST00000566014 ZNF219Q9P2Y4 722 aaPredicted RBP12.98□□□□□ -0.33
TMEM87A-208ENST00000566014 SAMD1Q6SPF0 538 aaPredicted RBP12.92□□□□□ -0.34
TMEM87A-208ENST00000566014 TRHP20396 242 aaPredicted RBP12.91□□□□□ -0.34
TMEM87A-208ENST00000566014 POTEHQ6S545 545 aa12.81□□□□□ -0.36
TMEM87A-208ENST00000566014 ABCB7O75027 752 aa12.8□□□□□ -0.36
TMEM87A-208ENST00000566014 TRIM41Q8WV44 630 aa12.75□□□□□ -0.37
TMEM87A-208ENST00000566014 MYCNP04198 464 aaPredicted RBP12.72□□□□□ -0.37
TMEM87A-208ENST00000566014 RBM42Q9BTD8 480 aaKnown RBP12.64□□□□□ -0.39
TMEM87A-208ENST00000566014 POLA2Q14181 598 aa12.54□□□□□ -0.4
TMEM87A-208ENST00000566014 SLC4A1APQ9BWU0 796 aaKnown RBP12.53□□□□□ -0.4
TMEM87A-208ENST00000566014 FOXD4L1Q9NU39 408 aa12.49□□□□□ -0.41
TMEM87A-208ENST00000566014 NISCHQ9Y2I1 1504 aa12.44□□□□□ -0.42
TMEM87A-208ENST00000566014 ZBTB12Q9Y330 459 aaPredicted RBP12.4□□□□□ -0.42
TMEM87A-208ENST00000566014 CHRDL2Q6WN34 429 aa12.34□□□□□ -0.43
TMEM87A-208ENST00000566014 ILDR1Q86SU0 546 aaPredicted RBP12.32□□□□□ -0.44
TMEM87A-208ENST00000566014 ATF5Q9Y2D1 282 aaPredicted RBP12.3□□□□□ -0.44
TMEM87A-208ENST00000566014 AKT1S1Q96B36 256 aa12.28□□□□□ -0.44
TMEM87A-208ENST00000566014 ATXN8OSP0DMR3 200 aa12.18□□□□□ -0.46
TMEM87A-208ENST00000566014 CECR2Q9BXF3 1484 aa12.14□□□□□ -0.47
TMEM87A-208ENST00000566014 ZBTB22O15209 634 aa12.13□□□□□ -0.47
TMEM87A-208ENST00000566014 PABPN1Q86U42 306 aaKnown RBP eCLIP12.13□□□□□ -0.47
TMEM87A-208ENST00000566014 OSCARQ8IYS5 282 aa12.13□□□□□ -0.47
TMEM87A-208ENST00000566014 REM2Q8IYK8 340 aaPredicted RBP12.11□□□□□ -0.47
TMEM87A-208ENST00000566014 CUX2O14529 1486 aa12.08□□□□□ -0.48
TMEM87A-208ENST00000566014 FBLN2P98095 1184 aa12□□□□□ -0.49
TMEM87A-208ENST00000566014 PIP4P2Q8N4L2 257 aa11.99□□□□□ -0.49
TMEM87A-208ENST00000566014 SPDYE2BA6NHP3 402 aa11.96□□□□□ -0.49
TMEM87A-208ENST00000566014 PITPNM1O00562 1244 aa11.96□□□□□ -0.49
TMEM87A-208ENST00000566014 SPDYE6P0CI01 402 aa11.96□□□□□ -0.49
TMEM87A-208ENST00000566014 SPDYE2Q495Y8 402 aa11.96□□□□□ -0.49
TMEM87A-208ENST00000566014 SP7Q8TDD2 431 aaPredicted RBP11.96□□□□□ -0.49
TMEM87A-208ENST00000566014 CC2D2AQ9P2K1 1620 aa11.95□□□□□ -0.5
TMEM87A-208ENST00000566014 FXR2P51116 673 aaKnown RBP eCLIP11.92□□□□□ -0.5
TMEM87A-208ENST00000566014 RB1CC1Q8TDY2 1594 aa11.91□□□□□ -0.5
TMEM87A-208ENST00000566014 HAX1O00165 279 aa11.83□□□□□ -0.52
TMEM87A-208ENST00000566014 SPDYE1Q8NFV5 336 aaPredicted RBP11.79□□□□□ -0.52
TMEM87A-208ENST00000566014 MKRN4PQ13434 485 aaPredicted RBP11.76□□□□□ -0.53
TMEM87A-208ENST00000566014 UNC13AQ9UPW8 1703 aa11.75□□□□□ -0.53
TMEM87A-208ENST00000566014 ZNF692Q9BU19 519 aaPredicted RBP11.75□□□□□ -0.53
TMEM87A-208ENST00000566014 SSUH2Q9Y2M2 353 aa11.74□□□□□ -0.53
TMEM87A-208ENST00000566014 CLEC11AQ9Y240 323 aa11.7□□□□□ -0.54
TMEM87A-208ENST00000566014 CCDC180Q9P1Z9 1646 aa11.68□□□□□ -0.54
TMEM87A-208ENST00000566014 PRKAR2AP13861 404 aaKnown RBP11.67□□□□□ -0.54
TMEM87A-208ENST00000566014 BICRAQ9NZM4 1560 aa11.65□□□□□ -0.54
TMEM87A-208ENST00000566014 ERCC6Q03468 1493 aa11.61□□□□□ -0.55
TMEM87A-208ENST00000566014 EVX2Q03828 476 aa11.57□□□□□ -0.56
TMEM87A-208ENST00000566014 C19orf67A6NJJ6 358 aa11.54□□□□□ -0.56
TMEM87A-208ENST00000566014 LMTK3Q96Q04 1460 aa11.54□□□□□ -0.56
TMEM87A-208ENST00000566014 SOCS7O14512 581 aa11.53□□□□□ -0.56
TMEM87A-208ENST00000566014 PRR29P0C7W0 189 aa11.53□□□□□ -0.56
TMEM87A-208ENST00000566014 EIF4G1Q04637 1599 aaKnown RBP11.49□□□□□ -0.57
TMEM87A-208ENST00000566014 CSRNP3Q8WYN3 585 aa11.48□□□□□ -0.57
TMEM87A-208ENST00000566014 CHADLQ6NUI6 762 aa11.44□□□□□ -0.58
TMEM87A-208ENST00000566014 NACADO15069 1562 aa11.39□□□□□ -0.59
TMEM87A-208ENST00000566014 GABBR2O75899 941 aa11.39□□□□□ -0.59
TMEM87A-208ENST00000566014 RIMBP3CA6NJZ7 1639 aa11.38□□□□□ -0.59
TMEM87A-208ENST00000566014 RIMBP3BA6NNM3 1639 aa11.38□□□□□ -0.59
TMEM87A-208ENST00000566014 RIMBP3Q9UFD9 1639 aa11.38□□□□□ -0.59
TMEM87A-208ENST00000566014 ILDR2Q71H61 639 aa11.36□□□□□ -0.59
TMEM87A-208ENST00000566014 CLCN6P51797 869 aa11.33□□□□□ -0.6
TMEM87A-208ENST00000566014 FARP1Q9Y4F1 1045 aaPredicted RBP11.33□□□□□ -0.6
TMEM87A-208ENST00000566014 STAG3Q9UJ98 1225 aa11.31□□□□□ -0.6
TMEM87A-208ENST00000566014 CD44P16070 742 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms