RNA–Protein interactions for RNA: ENST00000512557.5

SLC41A3-216, Transcript of solute carrier family 41 member 3, humanhuman

TSL 2

Gene SLC41A3, Length 3,828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC41A3-216ENST00000512557 NISCHQ9Y2I1 1504 aa18.46■□□□□ 0.55
SLC41A3-216ENST00000512557 DCAF8L2P0C7V8 631 aa16.49■□□□□ 0.23
SLC41A3-216ENST00000512557 SHROOM4Q9ULL8 1493 aa16.01■□□□□ 0.15
SLC41A3-216ENST00000512557 ABCC9O60706 1549 aa15.7■□□□□ 0.1
SLC41A3-216ENST00000512557 CCDC180Q9P1Z9 1646 aa15.69■□□□□ 0.1
SLC41A3-216ENST00000512557 SUPT5HO00267 1087 aaKnown RBP15.69■□□□□ 0.1
SLC41A3-216ENST00000512557 ZCCHC6Q5VYS8 1495 aaKnown RBP15.41■□□□□ 0.06
SLC41A3-216ENST00000512557 PABPN1Q86U42 306 aaKnown RBP eCLIP15.1■□□□□ 0.01
SLC41A3-216ENST00000512557 SCRIBQ14160 1630 aa15.06■□□□□ 0
SLC41A3-216ENST00000512557 DCAF1Q9Y4B6 1507 aa14.88□□□□□ -0.03
SLC41A3-216ENST00000512557 NACADO15069 1562 aa14.85□□□□□ -0.03
SLC41A3-216ENST00000512557 CHIC1Q5VXU3 224 aa14.84□□□□□ -0.03
SLC41A3-216ENST00000512557 RB1CC1Q8TDY2 1594 aa14.84□□□□□ -0.03
SLC41A3-216ENST00000512557 EHMT2Q96KQ7 1210 aa14.67□□□□□ -0.06
SLC41A3-216ENST00000512557 MYO15BQ96JP2 1530 aa14.63□□□□□ -0.07
SLC41A3-216ENST00000512557 FAM9AQ8IZU1 332 aaPredicted RBP14.6□□□□□ -0.07
SLC41A3-216ENST00000512557 CECR2Q9BXF3 1484 aa14.59□□□□□ -0.07
SLC41A3-216ENST00000512557 LOC105371045A0A1W2PR82 267 aa14.59□□□□□ -0.07
SLC41A3-216ENST00000512557 TRIM41Q8WV44 630 aa14.52□□□□□ -0.09
SLC41A3-216ENST00000512557 RSF1Q96T23 1441 aaPredicted RBP14.49□□□□□ -0.09
SLC41A3-216ENST00000512557 PCGF6Q9BYE7 350 aa14.48□□□□□ -0.09
SLC41A3-216ENST00000512557 MROH2BQ7Z745 1585 aa14.4□□□□□ -0.1
SLC41A3-216ENST00000512557 BAZ1AQ9NRL2 1556 aaPredicted RBP14.26□□□□□ -0.13
SLC41A3-216ENST00000512557 UNC13AQ9UPW8 1703 aa14.25□□□□□ -0.13
SLC41A3-216ENST00000512557 WIZO95785 1651 aa14.25□□□□□ -0.13
SLC41A3-216ENST00000512557 BICRAQ9NZM4 1560 aa14.24□□□□□ -0.13
SLC41A3-216ENST00000512557 HRCP23327 699 aa14.22□□□□□ -0.13
SLC41A3-216ENST00000512557 PPARGC1BQ86YN6 1023 aaKnown RBP14.15□□□□□ -0.14
SLC41A3-216ENST00000512557 SMARCA4P51532 1647 aa14.14□□□□□ -0.15
SLC41A3-216ENST00000512557 BAZ1BQ9UIG0 1483 aaKnown RBP14.1□□□□□ -0.15
SLC41A3-216ENST00000512557 TTBK1Q5TCY1 1321 aaPredicted RBP14.09□□□□□ -0.15
SLC41A3-216ENST00000512557 RANGAP1P46060 587 aaPredicted RBP14.07□□□□□ -0.16
SLC41A3-216ENST00000512557 TRIM26Q12899 539 aaPredicted RBP14.05□□□□□ -0.16
SLC41A3-216ENST00000512557 ATAD2BQ9ULI0 1458 aa14.04□□□□□ -0.16
SLC41A3-216ENST00000512557 CCDC88BA6NC98 1476 aa14.03□□□□□ -0.16
SLC41A3-216ENST00000512557 EIF4G1Q04637 1599 aaKnown RBP13.99□□□□□ -0.17
SLC41A3-216ENST00000512557 UBTFP17480 764 aaKnown RBP13.97□□□□□ -0.17
SLC41A3-216ENST00000512557 TOP2AP11388 1531 aaKnown RBP13.96□□□□□ -0.17
SLC41A3-216ENST00000512557 DNAJC5BQ9UF47 199 aa13.94□□□□□ -0.18
SLC41A3-216ENST00000512557 SMARCA2P51531 1590 aa13.94□□□□□ -0.18
SLC41A3-216ENST00000512557 ABCC8Q09428 1581 aa13.87□□□□□ -0.19
SLC41A3-216ENST00000512557 CC2D2AQ9P2K1 1620 aa13.82□□□□□ -0.2
SLC41A3-216ENST00000512557 CSRNP3Q8WYN3 585 aa13.8□□□□□ -0.2
SLC41A3-216ENST00000512557 NCAPD3P42695 1498 aa13.8□□□□□ -0.2
SLC41A3-216ENST00000512557 WRNQ14191 1432 aaPredicted RBP eCLIP13.77□□□□□ -0.21
SLC41A3-216ENST00000512557 ZEB1P37275 1124 aaPredicted RBP13.76□□□□□ -0.21
SLC41A3-216ENST00000512557 SOGA1O94964 1423 aa13.76□□□□□ -0.21
SLC41A3-216ENST00000512557 CCER1Q8TC90 406 aaPredicted RBP13.69□□□□□ -0.22
SLC41A3-216ENST00000512557 CADPSQ9ULU8 1353 aa13.68□□□□□ -0.22
SLC41A3-216ENST00000512557 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.67□□□□□ -0.22
SLC41A3-216ENST00000512557 RUSC2Q8N2Y8 1516 aa13.67□□□□□ -0.22
SLC41A3-216ENST00000512557 NESP48681 1621 aa13.67□□□□□ -0.22
SLC41A3-216ENST00000512557 APLP2Q06481 763 aa13.66□□□□□ -0.22
SLC41A3-216ENST00000512557 PEG3Q9GZU2 1588 aa13.66□□□□□ -0.22
SLC41A3-216ENST00000512557 ATP1B4Q9UN42 357 aaPredicted RBP13.64□□□□□ -0.23
SLC41A3-216ENST00000512557 HMGXB3Q12766 1538 aa13.63□□□□□ -0.23
SLC41A3-216ENST00000512557 CEP162Q5TB80 1403 aa13.58□□□□□ -0.24
SLC41A3-216ENST00000512557 FBLN2P98095 1184 aa13.55□□□□□ -0.24
SLC41A3-216ENST00000512557 HNRNPUL2Q1KMD3 747 aaKnown RBP13.55□□□□□ -0.24
SLC41A3-216ENST00000512557 FANCD2Q9BXW9 1451 aa13.54□□□□□ -0.24
SLC41A3-216ENST00000512557 CFTRP13569 1480 aa13.54□□□□□ -0.24
SLC41A3-216ENST00000512557 P3H3Q8IVL6 736 aa13.53□□□□□ -0.24
SLC41A3-216ENST00000512557 ERCC6Q03468 1493 aa13.52□□□□□ -0.25
SLC41A3-216ENST00000512557 TNIKQ9UKE5 1360 aa13.51□□□□□ -0.25
SLC41A3-216ENST00000512557 SYNJ1O43426 1573 aa13.5□□□□□ -0.25
SLC41A3-216ENST00000512557 EEA1Q15075 1411 aa13.5□□□□□ -0.25
SLC41A3-216ENST00000512557 PDS5BQ9NTI5 1447 aa13.48□□□□□ -0.25
SLC41A3-216ENST00000512557 GOLGA3Q08378 1498 aa13.48□□□□□ -0.25
SLC41A3-216ENST00000512557 CUX2O14529 1486 aa13.48□□□□□ -0.25
SLC41A3-216ENST00000512557 TDRD9Q8NDG6 1382 aaKnown RBP13.46□□□□□ -0.25
SLC41A3-216ENST00000512557 CEP164Q9UPV0 1460 aa13.45□□□□□ -0.26
SLC41A3-216ENST00000512557 KIF27Q86VH2 1401 aa13.44□□□□□ -0.26
SLC41A3-216ENST00000512557 CLIP1P30622 1438 aa13.43□□□□□ -0.26
SLC41A3-216ENST00000512557 RAD54L2Q9Y4B4 1467 aa13.42□□□□□ -0.26
SLC41A3-216ENST00000512557 CUX1P39880 1505 aa13.41□□□□□ -0.26
SLC41A3-216ENST00000512557 FGD5Q6ZNL6 1462 aa13.4□□□□□ -0.27
SLC41A3-216ENST00000512557 ITGAEP38570 1179 aa13.39□□□□□ -0.27
SLC41A3-216ENST00000512557 ARID3CA6NKF2 412 aa13.39□□□□□ -0.27
SLC41A3-216ENST00000512557 RAPGEF2Q9Y4G8 1499 aa13.38□□□□□ -0.27
SLC41A3-216ENST00000512557 CARMIL1Q5VZK9 1371 aa13.33□□□□□ -0.28
SLC41A3-216ENST00000512557 TOP2BQ02880 1626 aa13.3□□□□□ -0.28
SLC41A3-216ENST00000512557 TOPBP1Q92547 1522 aa13.3□□□□□ -0.28
SLC41A3-216ENST00000512557 CHMP7Q8WUX9 453 aaPredicted RBP13.29□□□□□ -0.28
SLC41A3-216ENST00000512557 DIEXFQ68CQ4 756 aaKnown RBP13.28□□□□□ -0.28
SLC41A3-216ENST00000512557 POLA1P09884 1462 aaPredicted RBP13.27□□□□□ -0.29
SLC41A3-216ENST00000512557 LAMC3Q9Y6N6 1575 aa13.26□□□□□ -0.29
SLC41A3-216ENST00000512557 IGF1RP08069 1367 aa13.26□□□□□ -0.29
SLC41A3-216ENST00000512557 URB2Q14146 1524 aaKnown RBP13.25□□□□□ -0.29
SLC41A3-216ENST00000512557 AQRO60306 1485 aaKnown RBP eCLIP13.25□□□□□ -0.293e-7■■■■■ 30.5
SLC41A3-216ENST00000512557 KANK4Q5T7N3 995 aaPredicted RBP13.23□□□□□ -0.29
SLC41A3-216ENST00000512557 VPS8Q8N3P4 1428 aa13.23□□□□□ -0.29
SLC41A3-216ENST00000512557 YTHDC1Q96MU7 727 aaKnown RBP13.19□□□□□ -0.3
SLC41A3-216ENST00000512557 DNMBPQ6XZF7 1577 aa13.19□□□□□ -0.3
SLC41A3-216ENST00000512557 MRC2Q9UBG0 1479 aa13.19□□□□□ -0.3
SLC41A3-216ENST00000512557 GAPVD1Q14C86 1478 aa13.17□□□□□ -0.3
SLC41A3-216ENST00000512557 CENPBP07199 599 aaPredicted RBP13.17□□□□□ -0.3
SLC41A3-216ENST00000512557 FAM50AQ14320 339 aaKnown RBP13.17□□□□□ -0.3
SLC41A3-216ENST00000512557 KIF21BO75037 1637 aa13.16□□□□□ -0.3
SLC41A3-216ENST00000512557 KIF21AQ7Z4S6 1674 aa13.16□□□□□ -0.3
SLC41A3-216ENST00000512557 BIVM-ERCC5R4GMW8 1640 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms