RNA–Protein interactions for RNA: ENST00000376108.7

CLCN5-204, Transcript of chloride voltage-gated channel 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN5, Length 2,660 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN5-204ENST00000376108 PELP1Q8IZL8 1130 aaKnown RBP16.08■□□□□ 0.16
CLCN5-204ENST00000376108 MYT1Q01538 1121 aa15.8■□□□□ 0.12
CLCN5-204ENST00000376108 TTBK1Q5TCY1 1321 aaPredicted RBP15.18■□□□□ 0.02
CLCN5-204ENST00000376108 HRCP23327 699 aa15□□□□□ -0.01
CLCN5-204ENST00000376108 PRKCSHP14314 528 aaPredicted RBP14.85□□□□□ -0.03
CLCN5-204ENST00000376108 SCAF1Q9H7N4 1312 aaKnown RBP14.74□□□□□ -0.05
CLCN5-204ENST00000376108 PPARGC1BQ86YN6 1023 aaKnown RBP14.57□□□□□ -0.08
CLCN5-204ENST00000376108 BCL11AQ9H165 835 aa14.56□□□□□ -0.08
CLCN5-204ENST00000376108 ERICH6Q7L0X2 663 aa14.5□□□□□ -0.09
CLCN5-204ENST00000376108 APLP2Q06481 763 aa14.46□□□□□ -0.09
CLCN5-204ENST00000376108 FAM9AQ8IZU1 332 aaPredicted RBP14.39□□□□□ -0.11
CLCN5-204ENST00000376108 SLC24A1O60721 1099 aa14.2□□□□□ -0.14
CLCN5-204ENST00000376108 CENPBP07199 599 aaPredicted RBP14.17□□□□□ -0.14
CLCN5-204ENST00000376108 PCGF6Q9BYE7 350 aa14.12□□□□□ -0.15
CLCN5-204ENST00000376108 ACIN1Q9UKV3 1341 aaKnown RBP14.08□□□□□ -0.16
CLCN5-204ENST00000376108 GTF3C3Q9Y5Q9 886 aa13.99□□□□□ -0.17
CLCN5-204ENST00000376108 NEUROD1Q13562 356 aa13.96□□□□□ -0.17
CLCN5-204ENST00000376108 ANP32EQ9BTT0 268 aa13.87□□□□□ -0.19
CLCN5-204ENST00000376108 ZEB1P37275 1124 aaPredicted RBP13.81□□□□□ -0.2
CLCN5-204ENST00000376108 CSRNP3Q8WYN3 585 aa13.73□□□□□ -0.21
CLCN5-204ENST00000376108 MYO15BQ96JP2 1530 aa13.72□□□□□ -0.21
CLCN5-204ENST00000376108 DAXXQ9UER7 740 aaPredicted RBP13.71□□□□□ -0.22
CLCN5-204ENST00000376108 EIF5BO60841 1220 aaKnown RBP13.62□□□□□ -0.23
CLCN5-204ENST00000376108 NISCHQ9Y2I1 1504 aa13.58□□□□□ -0.23
CLCN5-204ENST00000376108 CCDC180Q9P1Z9 1646 aa13.52□□□□□ -0.25
CLCN5-204ENST00000376108 ANO8Q9HCE9 1232 aaPredicted RBP13.51□□□□□ -0.25
CLCN5-204ENST00000376108 UBE2Q2Q8WVN8 375 aa13.49□□□□□ -0.25
CLCN5-204ENST00000376108 DCAF1Q9Y4B6 1507 aa13.48□□□□□ -0.25
CLCN5-204ENST00000376108 TRIM26Q12899 539 aaPredicted RBP13.45□□□□□ -0.26
CLCN5-204ENST00000376108 PLEKHG5O94827 1062 aa13.35□□□□□ -0.27
CLCN5-204ENST00000376108 TSHZ2Q9NRE2 1034 aa13.31□□□□□ -0.28
CLCN5-204ENST00000376108 DIEXFQ68CQ4 756 aaKnown RBP13.26□□□□□ -0.29
CLCN5-204ENST00000376108 SALL2Q9Y467 1007 aaPredicted RBP13.22□□□□□ -0.29
CLCN5-204ENST00000376108 PKNOX2Q96KN3 472 aa13.18□□□□□ -0.3
CLCN5-204ENST00000376108 PODXL2Q9NZ53 605 aa13.17□□□□□ -0.3
CLCN5-204ENST00000376108 CCDC136Q96JN2 1154 aa13.16□□□□□ -0.3
CLCN5-204ENST00000376108 YTHDC1Q96MU7 727 aaKnown RBP13.11□□□□□ -0.31
CLCN5-204ENST00000376108 CLSPNQ9HAW4 1339 aa13.1□□□□□ -0.31
CLCN5-204ENST00000376108 ERICH6BQ5W0A0 696 aa13.1□□□□□ -0.31
CLCN5-204ENST00000376108 SUPT16HQ9Y5B9 1047 aaKnown RBP13.09□□□□□ -0.31
CLCN5-204ENST00000376108 CHIC1Q5VXU3 224 aa13.08□□□□□ -0.32
CLCN5-204ENST00000376108 MYT1LQ9UL68 1186 aa13.04□□□□□ -0.32
CLCN5-204ENST00000376108 DEKP35659 375 aaKnown RBP12.97□□□□□ -0.33
CLCN5-204ENST00000376108 SUPT5HO00267 1087 aaKnown RBP12.94□□□□□ -0.34
CLCN5-204ENST00000376108 TRIM41Q8WV44 630 aa12.94□□□□□ -0.34
CLCN5-204ENST00000376108 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.93□□□□□ -0.34
CLCN5-204ENST00000376108 RBM19Q9Y4C8 960 aaKnown RBP12.89□□□□□ -0.35
CLCN5-204ENST00000376108 MSH5O43196 834 aa12.89□□□□□ -0.35
CLCN5-204ENST00000376108 LOC105371045A0A1W2PR82 267 aa12.84□□□□□ -0.35
CLCN5-204ENST00000376108 MIER1Q8N108 512 aa12.8□□□□□ -0.36
CLCN5-204ENST00000376108 NEFLP07196 543 aa12.78□□□□□ -0.36
CLCN5-204ENST00000376108 ZNF316A6NFI3 1004 aaPredicted RBP12.76□□□□□ -0.37
CLCN5-204ENST00000376108 CCER1Q8TC90 406 aaPredicted RBP12.75□□□□□ -0.37
CLCN5-204ENST00000376108 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.72□□□□□ -0.37
CLCN5-204ENST00000376108 IL27Q8NEV9 243 aa12.72□□□□□ -0.37
CLCN5-204ENST00000376108 FANCIQ9NVI1 1328 aa12.71□□□□□ -0.37
CLCN5-204ENST00000376108 RTN4Q9NQC3 1192 aaKnown RBP12.69□□□□□ -0.38
CLCN5-204ENST00000376108 SHROOM4Q9ULL8 1493 aa12.69□□□□□ -0.38
CLCN5-204ENST00000376108 ABCC9O60706 1549 aa12.67□□□□□ -0.38
CLCN5-204ENST00000376108 PDE4CQ08493 712 aa12.67□□□□□ -0.38
CLCN5-204ENST00000376108 ZMYND15Q9H091 742 aa12.64□□□□□ -0.39
CLCN5-204ENST00000376108 PDIA4P13667 645 aaKnown RBP12.64□□□□□ -0.39
CLCN5-204ENST00000376108 GLIPR1L2Q4G1C9 344 aa12.62□□□□□ -0.39
CLCN5-204ENST00000376108 BCANQ96GW7 911 aa12.61□□□□□ -0.39
CLCN5-204ENST00000376108 FGD1P98174 961 aa12.6□□□□□ -0.39
CLCN5-204ENST00000376108 A0A0U1RQG5 324 aaPredicted RBP12.55□□□□□ -0.4
CLCN5-204ENST00000376108 KLHL34Q8N239 644 aa12.55□□□□□ -0.4
CLCN5-204ENST00000376108 VSIG10Q8N0Z9 540 aa12.54□□□□□ -0.4
CLCN5-204ENST00000376108 AAMPQ13685 434 aa12.52□□□□□ -0.41
CLCN5-204ENST00000376108 NCBP3Q53F19 620 aaKnown RBP12.52□□□□□ -0.41
CLCN5-204ENST00000376108 AEBP2Q6ZN18 517 aaPredicted RBP12.51□□□□□ -0.41
CLCN5-204ENST00000376108 BCL11BQ9C0K0 894 aaPredicted RBP12.49□□□□□ -0.41
CLCN5-204ENST00000376108 FKBP8Q14318 412 aa12.49□□□□□ -0.41
CLCN5-204ENST00000376108 NBR1Q14596 966 aa12.49□□□□□ -0.41
CLCN5-204ENST00000376108 RBM10P98175 930 aaKnown RBP12.48□□□□□ -0.41
CLCN5-204ENST00000376108 TIMELESSQ9UNS1 1208 aa12.48□□□□□ -0.41
CLCN5-204ENST00000376108 RANGAP1P46060 587 aaPredicted RBP12.46□□□□□ -0.41
CLCN5-204ENST00000376108 RSPH6AQ9H0K4 717 aa12.44□□□□□ -0.42
CLCN5-204ENST00000376108 ITGAEP38570 1179 aa12.41□□□□□ -0.42
CLCN5-204ENST00000376108 RTL5Q5HYW3 569 aaPredicted RBP12.41□□□□□ -0.42
CLCN5-204ENST00000376108 C11orf95C9JLR9 678 aaPredicted RBP12.39□□□□□ -0.43
CLCN5-204ENST00000376108 ARXQ96QS3 562 aa12.38□□□□□ -0.43
CLCN5-204ENST00000376108 NOP58Q9Y2X3 529 aaKnown RBP12.37□□□□□ -0.43
CLCN5-204ENST00000376108 TAF7LQ5H9L4 462 aa12.36□□□□□ -0.43
CLCN5-204ENST00000376108 CDK11AQ9UQ88 783 aaPredicted RBP12.33□□□□□ -0.44
CLCN5-204ENST00000376108 PAK3O75914 559 aaPredicted RBP12.29□□□□□ -0.44
CLCN5-204ENST00000376108 WASHC2CQ9Y4E1 1318 aa12.26□□□□□ -0.45
CLCN5-204ENST00000376108 WASHC2AQ641Q2 1341 aa12.26□□□□□ -0.45
CLCN5-204ENST00000376108 BRPF3Q9ULD4 1205 aa12.24□□□□□ -0.45
CLCN5-204ENST00000376108 DNAJC5BQ9UF47 199 aa12.18□□□□□ -0.46
CLCN5-204ENST00000376108 HSP90AA2PQ14568 343 aaPredicted RBP12.17□□□□□ -0.46
CLCN5-204ENST00000376108 RRP9O43818 475 aaKnown RBP12.17□□□□□ -0.46
CLCN5-204ENST00000376108 PAXIP1Q6ZW49 1069 aaPredicted RBP12.15□□□□□ -0.46
CLCN5-204ENST00000376108 FAM43AQ8N2R8 423 aa12.15□□□□□ -0.46
CLCN5-204ENST00000376108 NEFMP07197 916 aa12.14□□□□□ -0.47
CLCN5-204ENST00000376108 USP35Q9P2H5 1018 aa12.12□□□□□ -0.47
CLCN5-204ENST00000376108 RSPH4AQ5TD94 716 aa12.11□□□□□ -0.47
CLCN5-204ENST00000376108 NAP1L2Q9ULW6 460 aaPredicted RBP12.1□□□□□ -0.47
CLCN5-204ENST00000376108 IPO9Q96P70 1041 aaKnown RBP12.09□□□□□ -0.47
CLCN5-204ENST00000376108 KCNH8Q96L42 1107 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms