RNA–Protein interactions for RNA: ENST00000506102.5

SLC41A3-208, Transcript of solute carrier family 41 member 3, humanhuman

TSL 2

Gene SLC41A3, Length 2,351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC41A3-208ENST00000506102 NISCHQ9Y2I1 1504 aa22.15■■□□□ 1.14
SLC41A3-208ENST00000506102 HRCP23327 699 aa19.35■□□□□ 0.69
SLC41A3-208ENST00000506102 SHROOM4Q9ULL8 1493 aa19.29■□□□□ 0.68
SLC41A3-208ENST00000506102 SUPT5HO00267 1087 aaKnown RBP19.2■□□□□ 0.66
SLC41A3-208ENST00000506102 MYO15BQ96JP2 1530 aa19■□□□□ 0.63
SLC41A3-208ENST00000506102 CHIC1Q5VXU3 224 aa18.96■□□□□ 0.63
SLC41A3-208ENST00000506102 PCGF6Q9BYE7 350 aa18.93■□□□□ 0.62
SLC41A3-208ENST00000506102 ZCCHC6Q5VYS8 1495 aaKnown RBP18.85■□□□□ 0.61
SLC41A3-208ENST00000506102 PPARGC1BQ86YN6 1023 aaKnown RBP18.81■□□□□ 0.6
SLC41A3-208ENST00000506102 DCAF1Q9Y4B6 1507 aa18.72■□□□□ 0.59
SLC41A3-208ENST00000506102 PELP1Q8IZL8 1130 aaKnown RBP18.56■□□□□ 0.56
SLC41A3-208ENST00000506102 CCDC180Q9P1Z9 1646 aa18.51■□□□□ 0.55
SLC41A3-208ENST00000506102 TRIM26Q12899 539 aaPredicted RBP18.47■□□□□ 0.55
SLC41A3-208ENST00000506102 LOC105371045A0A1W2PR82 267 aa18.4■□□□□ 0.54
SLC41A3-208ENST00000506102 ZEB1P37275 1124 aaPredicted RBP18.34■□□□□ 0.53
SLC41A3-208ENST00000506102 DCAF8L2P0C7V8 631 aa18.22■□□□□ 0.51
SLC41A3-208ENST00000506102 SCAF1Q9H7N4 1312 aaKnown RBP18.17■□□□□ 0.5
SLC41A3-208ENST00000506102 ABCC9O60706 1549 aa17.88■□□□□ 0.45
SLC41A3-208ENST00000506102 TRIM41Q8WV44 630 aa17.86■□□□□ 0.45
SLC41A3-208ENST00000506102 MYT1Q01538 1121 aa17.84■□□□□ 0.45
SLC41A3-208ENST00000506102 ACIN1Q9UKV3 1341 aaKnown RBP17.82■□□□□ 0.44
SLC41A3-208ENST00000506102 RSF1Q96T23 1441 aaPredicted RBP17.77■□□□□ 0.44
SLC41A3-208ENST00000506102 NEUROD1Q13562 356 aa17.72■□□□□ 0.43
SLC41A3-208ENST00000506102 FAM9AQ8IZU1 332 aaPredicted RBP17.71■□□□□ 0.42
SLC41A3-208ENST00000506102 CENPBP07199 599 aaPredicted RBP17.65■□□□□ 0.42
SLC41A3-208ENST00000506102 RB1CC1Q8TDY2 1594 aa17.64■□□□□ 0.42
SLC41A3-208ENST00000506102 GTF3C3Q9Y5Q9 886 aa17.61■□□□□ 0.41
SLC41A3-208ENST00000506102 CCER1Q8TC90 406 aaPredicted RBP17.6■□□□□ 0.41
SLC41A3-208ENST00000506102 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.58■□□□□ 0.41
SLC41A3-208ENST00000506102 DIEXFQ68CQ4 756 aaKnown RBP17.58■□□□□ 0.4
SLC41A3-208ENST00000506102 EHMT2Q96KQ7 1210 aa17.52■□□□□ 0.4
SLC41A3-208ENST00000506102 SCRIBQ14160 1630 aa17.47■□□□□ 0.39
SLC41A3-208ENST00000506102 WRNQ14191 1432 aaPredicted RBP eCLIP17.34■□□□□ 0.37
SLC41A3-208ENST00000506102 ZNF316A6NFI3 1004 aaPredicted RBP17.3■□□□□ 0.36
SLC41A3-208ENST00000506102 CECR2Q9BXF3 1484 aa17.24■□□□□ 0.35
SLC41A3-208ENST00000506102 MROH2BQ7Z745 1585 aa17.24■□□□□ 0.35
SLC41A3-208ENST00000506102 EIF4G1Q04637 1599 aaKnown RBP17.18■□□□□ 0.34
SLC41A3-208ENST00000506102 CEP162Q5TB80 1403 aa17.18■□□□□ 0.34
SLC41A3-208ENST00000506102 YTHDC1Q96MU7 727 aaKnown RBP17.16■□□□□ 0.34
SLC41A3-208ENST00000506102 WIZO95785 1651 aa17.14■□□□□ 0.33
SLC41A3-208ENST00000506102 TNIKQ9UKE5 1360 aa17.12■□□□□ 0.33
SLC41A3-208ENST00000506102 TTBK1Q5TCY1 1321 aaPredicted RBP17.11■□□□□ 0.33
SLC41A3-208ENST00000506102 BAZ1AQ9NRL2 1556 aaPredicted RBP17.11■□□□□ 0.33
SLC41A3-208ENST00000506102 MIER1Q8N108 512 aa17.1■□□□□ 0.33
SLC41A3-208ENST00000506102 CCDC88BA6NC98 1476 aa17.04■□□□□ 0.32
SLC41A3-208ENST00000506102 NACADO15069 1562 aa17.04■□□□□ 0.32
SLC41A3-208ENST00000506102 EEA1Q15075 1411 aa17.01■□□□□ 0.31
SLC41A3-208ENST00000506102 CLSPNQ9HAW4 1339 aa16.99■□□□□ 0.31
SLC41A3-208ENST00000506102 ABCC8Q09428 1581 aa16.98■□□□□ 0.31
SLC41A3-208ENST00000506102 SOGA1O94964 1423 aa16.97■□□□□ 0.31
SLC41A3-208ENST00000506102 CSRNP3Q8WYN3 585 aa16.95■□□□□ 0.3
SLC41A3-208ENST00000506102 UBTFP17480 764 aaKnown RBP16.92■□□□□ 0.3
SLC41A3-208ENST00000506102 TOP2AP11388 1531 aaKnown RBP16.92■□□□□ 0.3
SLC41A3-208ENST00000506102 GOLGA3Q08378 1498 aa16.91■□□□□ 0.3
SLC41A3-208ENST00000506102 HNRNPUL2Q1KMD3 747 aaKnown RBP16.87■□□□□ 0.29
SLC41A3-208ENST00000506102 SUPT16HQ9Y5B9 1047 aaKnown RBP16.84■□□□□ 0.29
SLC41A3-208ENST00000506102 RUSC2Q8N2Y8 1516 aa16.84■□□□□ 0.29
SLC41A3-208ENST00000506102 SMARCA2P51531 1590 aa16.83■□□□□ 0.29
SLC41A3-208ENST00000506102 CEP164Q9UPV0 1460 aa16.75■□□□□ 0.27
SLC41A3-208ENST00000506102 VPS8Q8N3P4 1428 aa16.74■□□□□ 0.27
SLC41A3-208ENST00000506102 CLIP1P30622 1438 aa16.73■□□□□ 0.27
SLC41A3-208ENST00000506102 SMARCA4P51532 1647 aa16.73■□□□□ 0.27
SLC41A3-208ENST00000506102 ANP32EQ9BTT0 268 aa16.72■□□□□ 0.27
SLC41A3-208ENST00000506102 TSHZ2Q9NRE2 1034 aa16.72■□□□□ 0.27
SLC41A3-208ENST00000506102 KIF21BO75037 1637 aa16.71■□□□□ 0.26
SLC41A3-208ENST00000506102 APLP2Q06481 763 aa16.69■□□□□ 0.26
SLC41A3-208ENST00000506102 DHX57Q6P158 1386 aaKnown RBP16.65■□□□□ 0.26
SLC41A3-208ENST00000506102 BAZ1BQ9UIG0 1483 aaKnown RBP16.65■□□□□ 0.26
SLC41A3-208ENST00000506102 BCL11AQ9H165 835 aa16.53■□□□□ 0.24
SLC41A3-208ENST00000506102 SYNJ1O43426 1573 aa16.53■□□□□ 0.24
SLC41A3-208ENST00000506102 RAPGEF2Q9Y4G8 1499 aa16.53■□□□□ 0.24
SLC41A3-208ENST00000506102 CUX2O14529 1486 aa16.46■□□□□ 0.23
SLC41A3-208ENST00000506102 RRBP1Q9P2E9 1410 aaKnown RBP16.45■□□□□ 0.22
SLC41A3-208ENST00000506102 RANGAP1P46060 587 aaPredicted RBP16.41■□□□□ 0.22
SLC41A3-208ENST00000506102 KCNH8Q96L42 1107 aa16.41■□□□□ 0.22
SLC41A3-208ENST00000506102 PEG3Q9GZU2 1588 aa16.4■□□□□ 0.22
SLC41A3-208ENST00000506102 FKBP8Q14318 412 aa16.39■□□□□ 0.21
SLC41A3-208ENST00000506102 ARAP1Q96P48 1450 aa16.39■□□□□ 0.21
SLC41A3-208ENST00000506102 KANK4Q5T7N3 995 aaPredicted RBP16.38■□□□□ 0.21
SLC41A3-208ENST00000506102 BCANQ96GW7 911 aa16.38■□□□□ 0.21
SLC41A3-208ENST00000506102 ERICH3Q5RHP9 1530 aa16.36■□□□□ 0.21
SLC41A3-208ENST00000506102 RBM19Q9Y4C8 960 aaKnown RBP16.35■□□□□ 0.21
SLC41A3-208ENST00000506102 CCNB3Q8WWL7 1395 aa16.34■□□□□ 0.21
SLC41A3-208ENST00000506102 PRXQ9BXM0 1461 aa16.33■□□□□ 0.2
SLC41A3-208ENST00000506102 NEFLP07196 543 aa16.31■□□□□ 0.2
SLC41A3-208ENST00000506102 UNC13AQ9UPW8 1703 aa16.3■□□□□ 0.2
SLC41A3-208ENST00000506102 TOP2BQ02880 1626 aa16.29■□□□□ 0.2
SLC41A3-208ENST00000506102 MAPKBP1O60336 1514 aa16.28■□□□□ 0.2
SLC41A3-208ENST00000506102 RAB3GAP2Q9H2M9 1393 aa16.26■□□□□ 0.19
SLC41A3-208ENST00000506102 DDX10Q13206 875 aaKnown RBP16.25■□□□□ 0.19
SLC41A3-208ENST00000506102 CCER2I3L3R5 266 aa16.24■□□□□ 0.19
SLC41A3-208ENST00000506102 PPP1R15AO75807 674 aaPredicted RBP16.24■□□□□ 0.19
SLC41A3-208ENST00000506102 ATAD2BQ9ULI0 1458 aa16.2■□□□□ 0.18
SLC41A3-208ENST00000506102 ITGAEP38570 1179 aa16.2■□□□□ 0.18
SLC41A3-208ENST00000506102 BIVM-ERCC5R4GMW8 1640 aa16.19■□□□□ 0.18
SLC41A3-208ENST00000506102 TIMELESSQ9UNS1 1208 aa16.19■□□□□ 0.18
SLC41A3-208ENST00000506102 WDR97A6NE52 1622 aa16.18■□□□□ 0.18
SLC41A3-208ENST00000506102 SETD5Q9C0A6 1442 aa16.18■□□□□ 0.18
SLC41A3-208ENST00000506102 MSH5O43196 834 aa16.15■□□□□ 0.18
SLC41A3-208ENST00000506102 ANP32CO43423 234 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 287.9 ms