RNA–Protein interactions for RNA: ENST00000376088.7

CLCN5-202, Transcript of chloride voltage-gated channel 5, humanhuman

TSL 2 BASIC

Gene CLCN5, Length 10,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN5-202ENST00000376088 MYT1Q01538 1121 aa9.23□□□□□ -0.93
CLCN5-202ENST00000376088 PELP1Q8IZL8 1130 aaKnown RBP9.09□□□□□ -0.95
CLCN5-202ENST00000376088 TTBK1Q5TCY1 1321 aaPredicted RBP8.62□□□□□ -1.03
CLCN5-202ENST00000376088 ZEB1P37275 1124 aaPredicted RBP8.44□□□□□ -1.06
CLCN5-202ENST00000376088 CENPBP07199 599 aaPredicted RBP8.37□□□□□ -1.07
CLCN5-202ENST00000376088 CCER1Q8TC90 406 aaPredicted RBP8.36□□□□□ -1.07
CLCN5-202ENST00000376088 NISCHQ9Y2I1 1504 aa8.26□□□□□ -1.09
CLCN5-202ENST00000376088 YTHDC1Q96MU7 727 aaKnown RBP8.25□□□□□ -1.09
CLCN5-202ENST00000376088 ERICH6Q7L0X2 663 aa8.11□□□□□ -1.11
CLCN5-202ENST00000376088 CLSPNQ9HAW4 1339 aa8.01□□□□□ -1.13
CLCN5-202ENST00000376088 MYT1LQ9UL68 1186 aa7.98□□□□□ -1.13
CLCN5-202ENST00000376088 HRCP23327 699 aa7.98□□□□□ -1.13
CLCN5-202ENST00000376088 NEFLP07196 543 aa7.94□□□□□ -1.14
CLCN5-202ENST00000376088 PCGF6Q9BYE7 350 aa7.87□□□□□ -1.15
CLCN5-202ENST00000376088 TRIM26Q12899 539 aaPredicted RBP7.85□□□□□ -1.15
CLCN5-202ENST00000376088 APLP2Q06481 763 aa7.82□□□□□ -1.16
CLCN5-202ENST00000376088 SUPT5HO00267 1087 aaKnown RBP7.81□□□□□ -1.16
CLCN5-202ENST00000376088 GLIPR1L2Q4G1C9 344 aa7.78□□□□□ -1.16
CLCN5-202ENST00000376088 FAM9AQ8IZU1 332 aaPredicted RBP7.73□□□□□ -1.17
CLCN5-202ENST00000376088 RTL5Q5HYW3 569 aaPredicted RBP7.72□□□□□ -1.17
CLCN5-202ENST00000376088 DAXXQ9UER7 740 aaPredicted RBP7.67□□□□□ -1.18
CLCN5-202ENST00000376088 DCAF8L2P0C7V8 631 aa7.6□□□□□ -1.19
CLCN5-202ENST00000376088 DIEXFQ68CQ4 756 aaKnown RBP7.57□□□□□ -1.2
CLCN5-202ENST00000376088 DCAF1Q9Y4B6 1507 aa7.57□□□□□ -1.2
CLCN5-202ENST00000376088 ACIN1Q9UKV3 1341 aaKnown RBP7.56□□□□□ -1.2
CLCN5-202ENST00000376088 CCDC180Q9P1Z9 1646 aa7.51□□□□□ -1.21
CLCN5-202ENST00000376088 CDK11AQ9UQ88 783 aaPredicted RBP7.51□□□□□ -1.21
CLCN5-202ENST00000376088 TRIM41Q8WV44 630 aa7.49□□□□□ -1.21
CLCN5-202ENST00000376088 GTF3C3Q9Y5Q9 886 aa7.49□□□□□ -1.21
CLCN5-202ENST00000376088 ZNF316A6NFI3 1004 aaPredicted RBP7.46□□□□□ -1.22
CLCN5-202ENST00000376088 SHROOM4Q9ULL8 1493 aa7.44□□□□□ -1.22
CLCN5-202ENST00000376088 ANP32AP39687 249 aaKnown RBP7.43□□□□□ -1.22
CLCN5-202ENST00000376088 ANP32EQ9BTT0 268 aa7.42□□□□□ -1.22
CLCN5-202ENST00000376088 NCLP19338 710 aaKnown RBP7.42□□□□□ -1.22
CLCN5-202ENST00000376088 RANGAP1P46060 587 aaPredicted RBP7.39□□□□□ -1.23
CLCN5-202ENST00000376088 ERICH6BQ5W0A0 696 aa7.37□□□□□ -1.23
CLCN5-202ENST00000376088 ANP32BQ92688 251 aaKnown RBP7.36□□□□□ -1.23
CLCN5-202ENST00000376088 CHIC1Q5VXU3 224 aa7.34□□□□□ -1.23
CLCN5-202ENST00000376088 ARID4BQ4LE39 1312 aaPredicted RBP7.34□□□□□ -1.23
CLCN5-202ENST00000376088 TNNT2P45379 298 aaPredicted RBP7.33□□□□□ -1.24
CLCN5-202ENST00000376088 TRIM44Q96DX7 344 aaPredicted RBP7.31□□□□□ -1.24
CLCN5-202ENST00000376088 ANP32CO43423 234 aa7.29□□□□□ -1.24
CLCN5-202ENST00000376088 EIF5BO60841 1220 aaKnown RBP7.28□□□□□ -1.24
CLCN5-202ENST00000376088 UBTFP17480 764 aaKnown RBP7.27□□□□□ -1.24
CLCN5-202ENST00000376088 DDRGK1Q96HY6 314 aa7.24□□□□□ -1.25
CLCN5-202ENST00000376088 SCAF1Q9H7N4 1312 aaKnown RBP7.24□□□□□ -1.25
CLCN5-202ENST00000376088 BCL11AQ9H165 835 aa7.23□□□□□ -1.25
CLCN5-202ENST00000376088 NEUROD1Q13562 356 aa7.23□□□□□ -1.25
CLCN5-202ENST00000376088 ZBTB47Q9UFB7 747 aaPredicted RBP7.22□□□□□ -1.25
CLCN5-202ENST00000376088 PPM1GO15355 546 aaPredicted RBP7.22□□□□□ -1.25
CLCN5-202ENST00000376088 PPARGC1BQ86YN6 1023 aaKnown RBP7.22□□□□□ -1.25
CLCN5-202ENST00000376088 EHMT2Q96KQ7 1210 aa7.21□□□□□ -1.25
CLCN5-202ENST00000376088 UPF2Q9HAU5 1272 aaKnown RBP7.21□□□□□ -1.26
CLCN5-202ENST00000376088 ZNF326Q5BKZ1 582 aaKnown RBP7.16□□□□□ -1.26
CLCN5-202ENST00000376088 USP35Q9P2H5 1018 aa7.15□□□□□ -1.26
CLCN5-202ENST00000376088 BECN1Q14457 450 aa7.13□□□□□ -1.27
CLCN5-202ENST00000376088 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.12□□□□□ -1.27
CLCN5-202ENST00000376088 PTMSP20962 102 aa7.11□□□□□ -1.27
CLCN5-202ENST00000376088 RSPH6AQ9H0K4 717 aa7.11□□□□□ -1.27
CLCN5-202ENST00000376088 L1TD1Q5T7N2 865 aaKnown RBP7.1□□□□□ -1.27
CLCN5-202ENST00000376088 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.1□□□□□ -1.27
CLCN5-202ENST00000376088 EEA1Q15075 1411 aa7.1□□□□□ -1.27
CLCN5-202ENST00000376088 NEFMP07197 916 aa7.1□□□□□ -1.27
CLCN5-202ENST00000376088 CDK11BP21127 795 aaKnown RBP7.09□□□□□ -1.27
CLCN5-202ENST00000376088 FKBP8Q14318 412 aa7.08□□□□□ -1.28
CLCN5-202ENST00000376088 SLC24A1O60721 1099 aa7.08□□□□□ -1.28
CLCN5-202ENST00000376088 GOLGA6L22H0YM25 854 aa7.06□□□□□ -1.28
CLCN5-202ENST00000376088 TIMELESSQ9UNS1 1208 aa7.06□□□□□ -1.28
CLCN5-202ENST00000376088 NOP58Q9Y2X3 529 aaKnown RBP7.05□□□□□ -1.28
CLCN5-202ENST00000376088 LOC105371045A0A1W2PR82 267 aa7.05□□□□□ -1.28
CLCN5-202ENST00000376088 CCDC136Q96JN2 1154 aa7.03□□□□□ -1.28
CLCN5-202ENST00000376088 CFAP44Q96MT7 982 aa7.03□□□□□ -1.28
CLCN5-202ENST00000376088 LAS1LQ9Y4W2 734 aaKnown RBP7.03□□□□□ -1.28
CLCN5-202ENST00000376088 MTERF4Q7Z6M4 381 aaKnown RBP7.02□□□□□ -1.29
CLCN5-202ENST00000376088 HNRNPUL2Q1KMD3 747 aaKnown RBP7.02□□□□□ -1.29
CLCN5-202ENST00000376088 POLR3GLQ9BT43 218 aa7.02□□□□□ -1.29
CLCN5-202ENST00000376088 HSP90AA1P07900 732 aaKnown RBP7.01□□□□□ -1.29
CLCN5-202ENST00000376088 PPP4R2Q9NY27 417 aa7.01□□□□□ -1.29
CLCN5-202ENST00000376088 MAP7D2Q96T17 732 aa7□□□□□ -1.29
CLCN5-202ENST00000376088 CCER2I3L3R5 266 aa6.99□□□□□ -1.29
CLCN5-202ENST00000376088 FANCIQ9NVI1 1328 aa6.99□□□□□ -1.29
CLCN5-202ENST00000376088 BCANQ96GW7 911 aa6.98□□□□□ -1.29
CLCN5-202ENST00000376088 CHAF1AQ13111 956 aaPredicted RBP6.98□□□□□ -1.29
CLCN5-202ENST00000376088 DEKP35659 375 aaKnown RBP6.97□□□□□ -1.29
CLCN5-202ENST00000376088 TONSLQ96HA7 1378 aa6.97□□□□□ -1.29
CLCN5-202ENST00000376088 NBR1Q14596 966 aa6.96□□□□□ -1.3
CLCN5-202ENST00000376088 SUPT16HQ9Y5B9 1047 aaKnown RBP6.96□□□□□ -1.3
CLCN5-202ENST00000376088 HNRNPUQ00839 825 aaKnown RBP eCLIP6.96□□□□□ -1.3
CLCN5-202ENST00000376088 ZCCHC6Q5VYS8 1495 aaKnown RBP6.95□□□□□ -1.3
CLCN5-202ENST00000376088 NRDCO43847 1150 aa6.94□□□□□ -1.3
CLCN5-202ENST00000376088 PNNQ9H307 717 aaKnown RBP6.94□□□□□ -1.3
CLCN5-202ENST00000376088 CHMP4BQ9H444 224 aaKnown RBP6.94□□□□□ -1.3
CLCN5-202ENST00000376088 NAP1L5Q96NT1 182 aaPredicted RBP6.93□□□□□ -1.3
CLCN5-202ENST00000376088 CANXP27824 592 aaKnown RBP6.93□□□□□ -1.3
CLCN5-202ENST00000376088 MSNP26038 577 aaKnown RBP6.92□□□□□ -1.3
CLCN5-202ENST00000376088 HSP90AA2PQ14568 343 aaPredicted RBP6.92□□□□□ -1.3
CLCN5-202ENST00000376088 RBM19Q9Y4C8 960 aaKnown RBP6.92□□□□□ -1.3
CLCN5-202ENST00000376088 CALRP27797 417 aaKnown RBP6.92□□□□□ -1.3
CLCN5-202ENST00000376088 GOLGA6L3A6NEY3 463 aa6.91□□□□□ -1.3
CLCN5-202ENST00000376088 CNGB1Q14028 1251 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms