RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 AEBP2Q6ZN18 517 aaPredicted RBP16.47■□□□□ 0.23
SDF2-206ENST00000587788 CHIC1Q5VXU3 224 aa16.39■□□□□ 0.21
SDF2-206ENST00000587788 PHF23Q9BUL5 403 aaPredicted RBP14.46□□□□□ -0.09
SDF2-206ENST00000587788 SENP3Q9H4L4 574 aaPredicted RBP13.89□□□□□ -0.19
SDF2-206ENST00000587788 PLPPR3Q6T4P5 718 aa13.41□□□□□ -0.26
SDF2-206ENST00000587788 NISCHQ9Y2I1 1504 aa13.13□□□□□ -0.31
SDF2-206ENST00000587788 FOXD1Q16676 465 aa12.86□□□□□ -0.35
SDF2-206ENST00000587788 PPP6R1Q9UPN7 881 aa12.63□□□□□ -0.39
SDF2-206ENST00000587788 ADRA2BP18089 450 aa12.59□□□□□ -0.39
SDF2-206ENST00000587788 PIAS4Q8N2W9 510 aaPredicted RBP12.16□□□□□ -0.46
SDF2-206ENST00000587788 KCNA4P22459 653 aa11.95□□□□□ -0.5
SDF2-206ENST00000587788 PPP4R3CPQ6ZMV5 832 aa11.85□□□□□ -0.51
SDF2-206ENST00000587788 CCDC180Q9P1Z9 1646 aa11.75□□□□□ -0.53
SDF2-206ENST00000587788 MSH5O43196 834 aa11.72□□□□□ -0.53
SDF2-206ENST00000587788 NCBP3Q53F19 620 aaKnown RBP11.61□□□□□ -0.55
SDF2-206ENST00000587788 NPM3O75607 178 aaKnown RBP11.49□□□□□ -0.57
SDF2-206ENST00000587788 SCAF1Q9H7N4 1312 aaKnown RBP11.49□□□□□ -0.57
SDF2-206ENST00000587788 CNKSR2Q8WXI2 1034 aa11.46□□□□□ -0.57
SDF2-206ENST00000587788 ABCC9O60706 1549 aa11.45□□□□□ -0.58
SDF2-206ENST00000587788 EHMT2Q96KQ7 1210 aa11.41□□□□□ -0.58
SDF2-206ENST00000587788 SLC4A1APQ9BWU0 796 aaKnown RBP11.41□□□□□ -0.58
SDF2-206ENST00000587788 MAPK8IP2Q13387 824 aaPredicted RBP11.33□□□□□ -0.6
SDF2-206ENST00000587788 DNAJC5BQ9UF47 199 aa11.24□□□□□ -0.61
SDF2-206ENST00000587788 CSRNP3Q8WYN3 585 aa11.21□□□□□ -0.61
SDF2-206ENST00000587788 RNF216Q9NWF9 866 aaPredicted RBP11.18□□□□□ -0.62
SDF2-206ENST00000587788 DMRT2Q9Y5R5 561 aa11.17□□□□□ -0.62
SDF2-206ENST00000587788 HOXD11P31277 338 aaPredicted RBP11.08□□□□□ -0.64
SDF2-206ENST00000587788 ZBTB22O15209 634 aa11.05□□□□□ -0.64
SDF2-206ENST00000587788 RB1CC1Q8TDY2 1594 aa11□□□□□ -0.65
SDF2-206ENST00000587788 NACADO15069 1562 aa10.98□□□□□ -0.65
SDF2-206ENST00000587788 ZCCHC6Q5VYS8 1495 aaKnown RBP10.95□□□□□ -0.66
SDF2-206ENST00000587788 UNC13AQ9UPW8 1703 aa10.93□□□□□ -0.66
SDF2-206ENST00000587788 FOXD4L1Q9NU39 408 aa10.91□□□□□ -0.66
SDF2-206ENST00000587788 DCAF8L2P0C7V8 631 aa10.89□□□□□ -0.67
SDF2-206ENST00000587788 MYO15BQ96JP2 1530 aa10.88□□□□□ -0.67
SDF2-206ENST00000587788 DCAF1Q9Y4B6 1507 aa10.84□□□□□ -0.67
SDF2-206ENST00000587788 SLC4A2P04920 1241 aa10.79□□□□□ -0.68
SDF2-206ENST00000587788 BICRAQ9NZM4 1560 aa10.74□□□□□ -0.69
SDF2-206ENST00000587788 SCRIBQ14160 1630 aa10.72□□□□□ -0.69
SDF2-206ENST00000587788 PABPN1Q86U42 306 aaKnown RBP eCLIP10.65□□□□□ -0.7
SDF2-206ENST00000587788 MYCNP04198 464 aaPredicted RBP10.6□□□□□ -0.71
SDF2-206ENST00000587788 ATXN8OSP0DMR3 200 aa10.53□□□□□ -0.72
SDF2-206ENST00000587788 SHROOM4Q9ULL8 1493 aa10.51□□□□□ -0.73
SDF2-206ENST00000587788 DCAF8L1A6NGE4 600 aa10.51□□□□□ -0.73
SDF2-206ENST00000587788 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.44□□□□□ -0.74
SDF2-206ENST00000587788 EIF4G1Q04637 1599 aaKnown RBP10.42□□□□□ -0.74
SDF2-206ENST00000587788 U3KPZ7 1027 aaPredicted RBP10.4□□□□□ -0.74
SDF2-206ENST00000587788 CC2D2AQ9P2K1 1620 aa10.4□□□□□ -0.75
SDF2-206ENST00000587788 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.33□□□□□ -0.76
SDF2-206ENST00000587788 HNRNPUL2Q1KMD3 747 aaKnown RBP10.33□□□□□ -0.76
SDF2-206ENST00000587788 SAMD1Q6SPF0 538 aaPredicted RBP10.32□□□□□ -0.76
SDF2-206ENST00000587788 ATF5Q9Y2D1 282 aaPredicted RBP10.3□□□□□ -0.76
SDF2-206ENST00000587788 CECR2Q9BXF3 1484 aa10.26□□□□□ -0.77
SDF2-206ENST00000587788 SMARCA4P51532 1647 aa10.24□□□□□ -0.77
SDF2-206ENST00000587788 BAZ1AQ9NRL2 1556 aaPredicted RBP10.18□□□□□ -0.78
SDF2-206ENST00000587788 MROH2BQ7Z745 1585 aa10.15□□□□□ -0.78
SDF2-206ENST00000587788 APLP2Q06481 763 aa10.13□□□□□ -0.79
SDF2-206ENST00000587788 ATAD2BQ9ULI0 1458 aa10.12□□□□□ -0.79
SDF2-206ENST00000587788 PEG3Q9GZU2 1588 aa10.12□□□□□ -0.79
SDF2-206ENST00000587788 SMARCA2P51531 1590 aa10.11□□□□□ -0.79
SDF2-206ENST00000587788 POTEDQ86YR6 584 aa10.11□□□□□ -0.79
SDF2-206ENST00000587788 NCAPD3P42695 1498 aa10.1□□□□□ -0.79
SDF2-206ENST00000587788 RNF39Q9H2S5 420 aa10.1□□□□□ -0.79
SDF2-206ENST00000587788 HMGXB3Q12766 1538 aa10.1□□□□□ -0.79
SDF2-206ENST00000587788 WIZO95785 1651 aa10.09□□□□□ -0.79
SDF2-206ENST00000587788 ZNF219Q9P2Y4 722 aaPredicted RBP10.08□□□□□ -0.8
SDF2-206ENST00000587788 FKBP8Q14318 412 aa10.06□□□□□ -0.8
SDF2-206ENST00000587788 BAZ1BQ9UIG0 1483 aaKnown RBP10.04□□□□□ -0.8
SDF2-206ENST00000587788 RSF1Q96T23 1441 aaPredicted RBP9.99□□□□□ -0.81
SDF2-206ENST00000587788 C1QBPQ07021 282 aaKnown RBP9.98□□□□□ -0.81
SDF2-206ENST00000587788 SPINK5Q9NQ38 1064 aaPredicted RBP9.98□□□□□ -0.81
SDF2-206ENST00000587788 NESP48681 1621 aa9.93□□□□□ -0.82
SDF2-206ENST00000587788 TOP2AP11388 1531 aaKnown RBP9.92□□□□□ -0.82
SDF2-206ENST00000587788 KIF21AQ7Z4S6 1674 aa9.9□□□□□ -0.83
SDF2-206ENST00000587788 TRHP20396 242 aaPredicted RBP9.89□□□□□ -0.83
SDF2-206ENST00000587788 MKRN4PQ13434 485 aaPredicted RBP9.89□□□□□ -0.83
SDF2-206ENST00000587788 LAMC3Q9Y6N6 1575 aa9.88□□□□□ -0.83
SDF2-206ENST00000587788 CAPN15O75808 1086 aa9.86□□□□□ -0.83
SDF2-206ENST00000587788 PRDM2Q13029 1718 aa9.85□□□□□ -0.83
SDF2-206ENST00000587788 POLA2Q14181 598 aa9.83□□□□□ -0.84
SDF2-206ENST00000587788 ERCC6Q03468 1493 aa9.83□□□□□ -0.84
SDF2-206ENST00000587788 THOC2Q8NI27 1593 aaKnown RBP9.83□□□□□ -0.84
SDF2-206ENST00000587788 SUPT5HO00267 1087 aaKnown RBP9.81□□□□□ -0.84
SDF2-206ENST00000587788 CCDC88BA6NC98 1476 aa9.79□□□□□ -0.84
SDF2-206ENST00000587788 CADPSQ9ULU8 1353 aa9.78□□□□□ -0.84
SDF2-206ENST00000587788 FBLN2P98095 1184 aa9.78□□□□□ -0.84
SDF2-206ENST00000587788 PROM2Q8N271 834 aa9.77□□□□□ -0.85
SDF2-206ENST00000587788 SPDYE4A6NLX3 237 aa9.76□□□□□ -0.85
SDF2-206ENST00000587788 CFTRP13569 1480 aa9.76□□□□□ -0.85
SDF2-206ENST00000587788 AMER1Q5JTC6 1135 aaPredicted RBP9.75□□□□□ -0.85
SDF2-206ENST00000587788 RTN4Q9NQC3 1192 aaKnown RBP9.74□□□□□ -0.85
SDF2-206ENST00000587788 PDS5BQ9NTI5 1447 aa9.73□□□□□ -0.85
SDF2-206ENST00000587788 CUX2O14529 1486 aa9.73□□□□□ -0.85
SDF2-206ENST00000587788 ZBTB12Q9Y330 459 aaPredicted RBP9.73□□□□□ -0.85
SDF2-206ENST00000587788 ABCB7O75027 752 aa9.72□□□□□ -0.85
SDF2-206ENST00000587788 FANCD2Q9BXW9 1451 aa9.72□□□□□ -0.85
SDF2-206ENST00000587788 DSG3P32926 999 aa9.71□□□□□ -0.86
SDF2-206ENST00000587788 CEP164Q9UPV0 1460 aa9.71□□□□□ -0.86
SDF2-206ENST00000587788 WDR62O43379 1518 aa9.69□□□□□ -0.86
SDF2-206ENST00000587788 MRC2Q9UBG0 1479 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms