Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
LINC00242Q5T6M2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC14.52□□□□□ -0.08
LINC00242Q5T6M2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC14.52□□□□□ -0.08
LINC00242Q5T6M2 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00242Q5T6M2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC14.52□□□□□ -0.08
LINC00242Q5T6M2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
LINC00242Q5T6M2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00242Q5T6M2 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00242Q5T6M2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC14.52□□□□□ -0.08
LINC00242Q5T6M2 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
LINC00242Q5T6M2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00242Q5T6M2 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00242Q5T6M2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00242Q5T6M2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC14.52□□□□□ -0.09
LINC00242Q5T6M2 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC14.52□□□□□ -0.09
LINC00242Q5T6M2 AC010997.5-201ENST00000609182 354 ntBASIC14.52□□□□□ -0.09
LINC00242Q5T6M2 AC068587.7-201ENST00000641602 218 ntBASIC14.52□□□□□ -0.09
LINC00242Q5T6M2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00242Q5T6M2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00242Q5T6M2 PARN-205ENST00000539279 1557 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC00242Q5T6M2 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LINC00242Q5T6M2 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC14.51□□□□□ -0.09
LINC00242Q5T6M2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00242Q5T6M2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC00242Q5T6M2 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00242Q5T6M2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LINC00242Q5T6M2 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00242Q5T6M2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00242Q5T6M2 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00242Q5T6M2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00242Q5T6M2 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00242Q5T6M2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00242Q5T6M2 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00242Q5T6M2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC14.51□□□□□ -0.09
LINC00242Q5T6M2 Z92544.1-202ENST00000571933 1220 ntBASIC14.51□□□□□ -0.09
LINC00242Q5T6M2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00242Q5T6M2 AL117332.1-201ENST00000622628 974 ntBASIC14.51□□□□□ -0.09
LINC00242Q5T6M2 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00242Q5T6M2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00242Q5T6M2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00242Q5T6M2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00242Q5T6M2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
LINC00242Q5T6M2 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
LINC00242Q5T6M2 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00242Q5T6M2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC00242Q5T6M2 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00242Q5T6M2 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LINC00242Q5T6M2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00242Q5T6M2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LINC00242Q5T6M2 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LINC00242Q5T6M2 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00242Q5T6M2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC14.5□□□□□ -0.09
LINC00242Q5T6M2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00242Q5T6M2 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00242Q5T6M2 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00242Q5T6M2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00242Q5T6M2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00242Q5T6M2 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00242Q5T6M2 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00242Q5T6M2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00242Q5T6M2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00242Q5T6M2 MIR4787-201ENST00000607364 84 ntBASIC14.5□□□□□ -0.09
LINC00242Q5T6M2 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC14.5□□□□□ -0.09
LINC00242Q5T6M2 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC14.5□□□□□ -0.09
LINC00242Q5T6M2 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00242Q5T6M2 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC14.5□□□□□ -0.09
LINC00242Q5T6M2 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00242Q5T6M2 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00242Q5T6M2 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00242Q5T6M2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LINC00242Q5T6M2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00242Q5T6M2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00242Q5T6M2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00242Q5T6M2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC14.49□□□□□ -0.09
LINC00242Q5T6M2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00242Q5T6M2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC14.49□□□□□ -0.09
LINC00242Q5T6M2 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
LINC00242Q5T6M2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00242Q5T6M2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LINC00242Q5T6M2 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00242Q5T6M2 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00242Q5T6M2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC14.49□□□□□ -0.09
LINC00242Q5T6M2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00242Q5T6M2 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
LINC00242Q5T6M2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
LINC00242Q5T6M2 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC14.49□□□□□ -0.09
LINC00242Q5T6M2 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00242Q5T6M2 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC14.49□□□□□ -0.09
LINC00242Q5T6M2 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
LINC00242Q5T6M2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00242Q5T6M2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC14.49□□□□□ -0.09
LINC00242Q5T6M2 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
LINC00242Q5T6M2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00242Q5T6M2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00242Q5T6M2 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00242Q5T6M2 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00242Q5T6M2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00242Q5T6M2 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00242Q5T6M2 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00242Q5T6M2 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms