Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.25■□□□□ 0.359e-7■■■■□ 20
NCBP2P52298 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.12■□□□□ 0.171e-12■■■■□ 20
NCBP2P52298 CHEK1-209ENST00000527013 661 ntTSL 314.43□□□□□ -0.11e-12■■■■□ 20
NCBP2P52298 CHEK1-207ENST00000525396 769 ntTSL 214.43□□□□□ -0.11e-12■■■■□ 20
NCBP2P52298 CHEK1-203ENST00000428830 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.461e-12■■■■□ 20
NCBP2P52298 CHEK1-204ENST00000438015 4153 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.731e-12■■■■□ 20
NCBP2P52298 CHEK1-213ENST00000532449 4051 ntTSL 2 BASIC10.32□□□□□ -0.761e-12■■■■□ 20
NCBP2P52298 CHEK1-214ENST00000532669 617 ntTSL 59.8□□□□□ -0.841e-12■■■■□ 20
NCBP2P52298 CHEK1-218ENST00000544373 1653 ntTSL 1 (best) BASIC9.77□□□□□ -0.851e-12■■■■□ 20
NCBP2P52298 CHEK1-217ENST00000534685 583 ntTSL 57.92□□□□□ -1.141e-12■■■■□ 20
NCBP2P52298 CHEK1-208ENST00000526937 562 ntTSL 45.19□□□□□ -1.581e-12■■■■□ 20
NCBP2P52298 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.541e-6■■■■□ 20
NCBP2P52298 ORC6-207ENST00000569239 1833 ntTSL 220.6■□□□□ 0.899e-18■■■■□ 20
NCBP2P52298 ORC6-202ENST00000563306 1190 ntTSL 216.33■□□□□ 0.29e-18■■■■□ 20
NCBP2P52298 ORC6-208ENST00000570260 561 ntTSL 215.09■□□□□ 0.019e-18■■■■□ 20
NCBP2P52298 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.84□□□□□ -0.199e-18■■■■□ 20
NCBP2P52298 ORC6-203ENST00000563599 681 ntTSL 513.5□□□□□ -0.259e-18■■■■□ 20
NCBP2P52298 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.279e-18■■■■□ 20
NCBP2P52298 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.73■□□□□ 0.271e-6■■■■□ 20
NCBP2P52298 TMEM135-204ENST00000526733 496 ntTSL 216.07■□□□□ 0.161e-9■■■■□ 20
NCBP2P52298 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.77■□□□□ 0.121e-9■■■■□ 20
NCBP2P52298 TMEM135-203ENST00000525018 753 ntTSL 58.22□□□□□ -1.091e-9■■■■□ 20
NCBP2P52298 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC6.46□□□□□ -1.381e-9■■■■□ 20
NCBP2P52298 TMEM135-206ENST00000529023 1095 ntTSL 25.62□□□□□ -1.511e-9■■■■□ 20
NCBP2P52298 HGS-217ENST00000577012 716 ntTSL 519.35■□□□□ 0.699e-15■■■■□ 20
NCBP2P52298 HGS-215ENST00000576393 922 ntTSL 218.89■□□□□ 0.619e-15■■■■□ 20
NCBP2P52298 HGS-205ENST00000571518 644 ntTSL 218.38■□□□□ 0.539e-15■■■■□ 20
NCBP2P52298 HGS-216ENST00000576498 1004 ntTSL 216.51■□□□□ 0.239e-15■■■■□ 20
NCBP2P52298 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.179e-15■■■■□ 20
NCBP2P52298 HGS-208ENST00000572392 824 ntTSL 514.6□□□□□ -0.079e-15■■■■□ 20
NCBP2P52298 NECAB3-215ENST00000494174 859 ntTSL 518.01■□□□□ 0.471e-10■■■■□ 20
NCBP2P52298 NECAB3-217ENST00000606106 591 ntTSL 418.01■□□□□ 0.471e-10■■■■□ 20
NCBP2P52298 NECAB3-208ENST00000480994 732 ntTSL 515.48■□□□□ 0.071e-10■■■■□ 20
NCBP2P52298 DAZAP1-204ENST00000586579 619 ntTSL 320.88■□□□□ 0.935e-7■■■■□ 20
NCBP2P52298 DAZAP1-210ENST00000592453 1021 ntTSL 514.13□□□□□ -0.155e-7■■■■□ 20
NCBP2P52298 ZFPM1-202ENST00000562417 497 ntTSL 316.37■□□□□ 0.211e-6■■■■□ 20
NCBP2P52298 BCAR1-221ENST00000569006 574 ntTSL 413.48□□□□□ -0.255e-7■■■■□ 19.9
NCBP2P52298 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.466e-8■■■■□ 19.9
NCBP2P52298 NOP56-210ENST00000470143 663 ntTSL 212.09□□□□□ -0.476e-8■■■■□ 19.9
NCBP2P52298 NOP56-217ENST00000494697 919 ntTSL 511.94□□□□□ -0.56e-8■■■■□ 19.9
NCBP2P52298 SEPT7-216ENST00000635172 509 ntTSL 220.78■□□□□ 0.921e-8■■■■□ 19.9
NCBP2P52298 SEPT7-219ENST00000635476 506 ntTSL 520.78■□□□□ 0.921e-8■■■■□ 19.9
NCBP2P52298 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.55■□□□□ 0.561e-8■■■■□ 19.9
NCBP2P52298 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.131e-8■■■■□ 19.9
NCBP2P52298 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.91□□□□□ -0.181e-8■■■■□ 19.9
NCBP2P52298 SEPT7-208ENST00000475109 733 ntTSL 54.53□□□□□ -1.681e-8■■■■□ 19.9
NCBP2P52298 SEPT7-217ENST00000635175 1464 ntTSL 24.17□□□□□ -1.741e-8■■■■□ 19.9
NCBP2P52298 SEPT7-211ENST00000493626 643 ntTSL 43.72□□□□□ -1.811e-8■■■■□ 19.9
NCBP2P52298 SEPT7-215ENST00000635047 760 ntTSL 43.42□□□□□ -1.861e-8■■■■□ 19.9
NCBP2P52298 SEPT7-220ENST00000635669 569 ntTSL 42.84□□□□□ -1.951e-8■■■■□ 19.9
NCBP2P52298 SEPT7-213ENST00000634600 583 ntTSL 21.78□□□□□ -2.121e-8■■■■□ 19.9
NCBP2P52298 SLC16A3-205ENST00000578574 958 ntTSL 221.73■■□□□ 1.071e-7■■■■□ 19.9
NCBP2P52298 SLC16A3-220ENST00000584781 562 ntTSL 420.56■□□□□ 0.881e-7■■■■□ 19.9
NCBP2P52298 SLC16A3-208ENST00000579572 863 ntTSL 318.24■□□□□ 0.511e-7■■■■□ 19.9
NCBP2P52298 SLC16A3-206ENST00000578684 866 ntTSL 317.07■□□□□ 0.321e-7■■■■□ 19.9
NCBP2P52298 SLC16A3-217ENST00000583237 808 ntTSL 316.8■□□□□ 0.281e-7■■■■□ 19.9
NCBP2P52298 SLC16A3-212ENST00000581642 557 ntTSL 416.62■□□□□ 0.251e-7■■■■□ 19.9
NCBP2P52298 SLC16A3-219ENST00000584689 1033 ntTSL 216.28■□□□□ 0.21e-7■■■■□ 19.9
NCBP2P52298 SLC16A3-203ENST00000577650 545 ntTSL 314.99□□□□□ -0.011e-7■■■■□ 19.9
NCBP2P52298 LINC01004-202ENST00000450686 538 ntTSL 3 BASIC9.12□□□□□ -0.954e-10■■■■□ 19.9
NCBP2P52298 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.74□□□□□ -1.974e-10■■■■□ 19.9
NCBP2P52298 C16orf52-201ENST00000331057 1359 ntTSL 1 (best)26.94■■□□□ 1.97e-8■■■■□ 19.9
NCBP2P52298 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.67■■□□□ 1.227e-8■■■■□ 19.9
NCBP2P52298 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.117e-8■■■■□ 19.9
NCBP2P52298 PNKP-223ENST00000629179 811 ntTSL 413.05□□□□□ -0.323e-6■■■■□ 19.9
NCBP2P52298 PLXNB2-205ENST00000432455 1620 ntTSL 516.74■□□□□ 0.276e-8■■■■□ 19.8
NCBP2P52298 MAD1L1-215ENST00000464742 449 ntTSL 514.98□□□□□ -0.012e-6■■■■□ 19.8
NCBP2P52298 MAD1L1-222ENST00000491858 494 ntTSL 411.69□□□□□ -0.542e-6■■■■□ 19.8
NCBP2P52298 MIR34AHG-202ENST00000635405 529 ntTSL 417.99■□□□□ 0.472e-11■■■■□ 19.8
NCBP2P52298 MIR34AHG-201ENST00000437157 409 ntTSL 517■□□□□ 0.312e-11■■■■□ 19.8
NCBP2P52298 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC13.04□□□□□ -0.322e-11■■■■□ 19.8
NCBP2P52298 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC12.82□□□□□ -0.363e-10■■■■□ 19.8
NCBP2P52298 TMEM126B-209ENST00000531477 820 ntTSL 310.16□□□□□ -0.783e-10■■■■□ 19.8
NCBP2P52298 TMEM126B-210ENST00000531718 575 ntTSL 49.55□□□□□ -0.883e-10■■■■□ 19.8
NCBP2P52298 UBE2W-204ENST00000519255 575 ntTSL 47.82□□□□□ -1.163e-10■■■■□ 19.8
NCBP2P52298 TMEM126B-204ENST00000528361 1388 ntTSL 1 (best)7.35□□□□□ -1.233e-10■■■■□ 19.8
NCBP2P52298 TMEM126B-201ENST00000358867 989 ntAPPRIS P3 TSL 2 BASIC7.31□□□□□ -1.243e-10■■■■□ 19.8
NCBP2P52298 TMEM126B-202ENST00000393375 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.293e-10■■■■□ 19.8
NCBP2P52298 TMEM126B-206ENST00000530783 675 ntTSL 56.47□□□□□ -1.373e-10■■■■□ 19.8
NCBP2P52298 TMEM126B-207ENST00000530901 478 ntTSL 26.47□□□□□ -1.373e-10■■■■□ 19.8
NCBP2P52298 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.52□□□□□ -1.533e-10■■■■□ 19.8
NCBP2P52298 TMEM126B-203ENST00000526822 853 ntTSL 25.16□□□□□ -1.583e-10■■■■□ 19.8
NCBP2P52298 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.853e-10■■■■□ 19.8
NCBP2P52298 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.23□□□□□ -1.893e-10■■■■□ 19.8
NCBP2P52298 UBE2W-205ENST00000519277 747 ntTSL 33.19□□□□□ -1.93e-10■■■■□ 19.8
NCBP2P52298 TMEM126B-205ENST00000529197 1149 ntTSL 1 (best)2.28□□□□□ -2.043e-10■■■■□ 19.8
NCBP2P52298 TMEM126B-208ENST00000531274 376 ntTSL 31.92□□□□□ -2.13e-10■■■■□ 19.8
NCBP2P52298 UBE2W-202ENST00000422906 3903 ntTSL 1 (best)1.14□□□□□ -2.233e-10■■■■□ 19.8
NCBP2P52298 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.81■□□□□ 0.442e-6■■■■□ 19.8
NCBP2P52298 TSPAN4-219ENST00000530404 818 ntTSL 518.72■□□□□ 0.591e-6■■■■□ 19.8
NCBP2P52298 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.461e-6■■■■□ 19.8
NCBP2P52298 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.461e-6■■■■□ 19.8
NCBP2P52298 TSPAN4-215ENST00000525334 860 ntTSL 317■□□□□ 0.311e-6■■■■□ 19.8
NCBP2P52298 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.93■□□□□ 0.141e-6■■■■□ 19.8
NCBP2P52298 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.131e-6■■■■□ 19.8
NCBP2P52298 PSME4-208ENST00000481518 886 ntTSL 521.03■□□□□ 0.962e-24■■■■□ 19.8
NCBP2P52298 PSME4-201ENST00000389993 6581 ntTSL 1 (best)14.28□□□□□ -0.122e-24■■■■□ 19.8
NCBP2P52298 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.252e-24■■■■□ 19.8
NCBP2P52298 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.481e-9■■■■□ 19.8
NCBP2P52298 PTBP1-209ENST00000586481 578 ntTSL 318.24■□□□□ 0.519e-7■■■■□ 19.8
Retrieved 100 of 18,329 protein–RNA pairs in 354.6 ms