RNA–Protein interactions for RNA: ENST00000534685.5

CHEK1-217, Transcript of checkpoint kinase 1, humanhuman

TSL 5

Gene CHEK1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-217ENST00000534685 AEBP2Q6ZN18 517 aaPredicted RBP28.36■■■□□ 2.13
CHEK1-217ENST00000534685 CHIC1Q5VXU3 224 aa26.44■■□□□ 1.82
CHEK1-217ENST00000534685 SENP3Q9H4L4 574 aaPredicted RBP24.11■■□□□ 1.45
CHEK1-217ENST00000534685 PHF23Q9BUL5 403 aaPredicted RBP23.8■■□□□ 1.4
CHEK1-217ENST00000534685 FOXD1Q16676 465 aa22.62■■□□□ 1.21
CHEK1-217ENST00000534685 NISCHQ9Y2I1 1504 aa22.38■■□□□ 1.17
CHEK1-217ENST00000534685 POTEDQ86YR6 584 aa21.52■■□□□ 1.04
CHEK1-217ENST00000534685 MSH5O43196 834 aa21.21■□□□□ 0.99
CHEK1-217ENST00000534685 PIAS4Q8N2W9 510 aaPredicted RBP20.91■□□□□ 0.94
CHEK1-217ENST00000534685 PPP6R1Q9UPN7 881 aa20.89■□□□□ 0.93
CHEK1-217ENST00000534685 PLPPR3Q6T4P5 718 aa20.86■□□□□ 0.93
CHEK1-217ENST00000534685 ADRA2BP18089 450 aa20.72■□□□□ 0.91
CHEK1-217ENST00000534685 ABCC9O60706 1549 aa20.42■□□□□ 0.86
CHEK1-217ENST00000534685 CCDC180Q9P1Z9 1646 aa20.05■□□□□ 0.8
CHEK1-217ENST00000534685 DNAJC5BQ9UF47 199 aa19.35■□□□□ 0.69
CHEK1-217ENST00000534685 RB1CC1Q8TDY2 1594 aa19.26■□□□□ 0.67
CHEK1-217ENST00000534685 MAPK8IP2Q13387 824 aaPredicted RBP19.19■□□□□ 0.66
CHEK1-217ENST00000534685 DCAF8L2P0C7V8 631 aa19.13■□□□□ 0.65
CHEK1-217ENST00000534685 DMRT2Q9Y5R5 561 aa19.1■□□□□ 0.65
CHEK1-217ENST00000534685 NACADO15069 1562 aa19.08■□□□□ 0.65
CHEK1-217ENST00000534685 PABPN1Q86U42 306 aaKnown RBP eCLIP19.04■□□□□ 0.64
CHEK1-217ENST00000534685 SCAF1Q9H7N4 1312 aaKnown RBP18.82■□□□□ 0.6
CHEK1-217ENST00000534685 MYO15BQ96JP2 1530 aa18.73■□□□□ 0.59
CHEK1-217ENST00000534685 BICRAQ9NZM4 1560 aa18.7■□□□□ 0.58
CHEK1-217ENST00000534685 UNC13AQ9UPW8 1703 aa18.7■□□□□ 0.58
CHEK1-217ENST00000534685 ZCCHC6Q5VYS8 1495 aaKnown RBP18.51■□□□□ 0.55
CHEK1-217ENST00000534685 CACNB1Q02641 598 aaPredicted RBP18.44■□□□□ 0.54
CHEK1-217ENST00000534685 DCAF1Q9Y4B6 1507 aa18.43■□□□□ 0.54
CHEK1-217ENST00000534685 SHROOM4Q9ULL8 1493 aa18.4■□□□□ 0.54
CHEK1-217ENST00000534685 CECR2Q9BXF3 1484 aa18.39■□□□□ 0.54
CHEK1-217ENST00000534685 SCRIBQ14160 1630 aa18.38■□□□□ 0.53
CHEK1-217ENST00000534685 CC2D2AQ9P2K1 1620 aa18.36■□□□□ 0.53
CHEK1-217ENST00000534685 EIF4G1Q04637 1599 aaKnown RBP18.27■□□□□ 0.52
CHEK1-217ENST00000534685 HOXD11P31277 338 aaPredicted RBP18.27■□□□□ 0.52
CHEK1-217ENST00000534685 PPP4R3CPQ6ZMV5 832 aa18.26■□□□□ 0.51
CHEK1-217ENST00000534685 DCAF8L1A6NGE4 600 aa18.16■□□□□ 0.5
CHEK1-217ENST00000534685 RNF39Q9H2S5 420 aa18.16■□□□□ 0.5
CHEK1-217ENST00000534685 CNKSR2Q8WXI2 1034 aa18■□□□□ 0.47
CHEK1-217ENST00000534685 RNF216Q9NWF9 866 aaPredicted RBP17.97■□□□□ 0.47
CHEK1-217ENST00000534685 DNAJC5Q9H3Z4 198 aa17.88■□□□□ 0.45
CHEK1-217ENST00000534685 C1QBPQ07021 282 aaKnown RBP17.81■□□□□ 0.44
CHEK1-217ENST00000534685 NCAPD3P42695 1498 aa17.65■□□□□ 0.42
CHEK1-217ENST00000534685 ERCC6Q03468 1493 aa17.64■□□□□ 0.41
CHEK1-217ENST00000534685 CUX2O14529 1486 aa17.62■□□□□ 0.41
CHEK1-217ENST00000534685 ATAD2BQ9ULI0 1458 aa17.59■□□□□ 0.41
CHEK1-217ENST00000534685 SMARCA2P51531 1590 aa17.49■□□□□ 0.39
CHEK1-217ENST00000534685 NESP48681 1621 aa17.47■□□□□ 0.39
CHEK1-217ENST00000534685 SMARCA4P51532 1647 aa17.47■□□□□ 0.39
CHEK1-217ENST00000534685 HMGXB3Q12766 1538 aa17.47■□□□□ 0.39
CHEK1-217ENST00000534685 BAZ1BQ9UIG0 1483 aaKnown RBP17.41■□□□□ 0.38
CHEK1-217ENST00000534685 BAZ1AQ9NRL2 1556 aaPredicted RBP17.37■□□□□ 0.37
CHEK1-217ENST00000534685 NCBP3Q53F19 620 aaKnown RBP17.33■□□□□ 0.36
CHEK1-217ENST00000534685 MROH2BQ7Z745 1585 aa17.27■□□□□ 0.35
CHEK1-217ENST00000534685 PEG3Q9GZU2 1588 aa17.27■□□□□ 0.35
CHEK1-217ENST00000534685 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.26■□□□□ 0.35
CHEK1-217ENST00000534685 THOC2Q8NI27 1593 aaKnown RBP17.25■□□□□ 0.35
CHEK1-217ENST00000534685 LAMC3Q9Y6N6 1575 aa17.23■□□□□ 0.35
CHEK1-217ENST00000534685 PDS5BQ9NTI5 1447 aa17.21■□□□□ 0.35
CHEK1-217ENST00000534685 NPM3O75607 178 aaKnown RBP17.2■□□□□ 0.34
CHEK1-217ENST00000534685 CADPSQ9ULU8 1353 aa17.15■□□□□ 0.34
CHEK1-217ENST00000534685 KIF21AQ7Z4S6 1674 aa17.13■□□□□ 0.33
CHEK1-217ENST00000534685 TRIM41Q8WV44 630 aa17.09■□□□□ 0.33
CHEK1-217ENST00000534685 MRC2Q9UBG0 1479 aa17.07■□□□□ 0.32
CHEK1-217ENST00000534685 WIZO95785 1651 aa17.01■□□□□ 0.31
CHEK1-217ENST00000534685 WDR62O43379 1518 aa16.99■□□□□ 0.31
CHEK1-217ENST00000534685 U3KPZ7 1027 aaPredicted RBP16.96■□□□□ 0.31
CHEK1-217ENST00000534685 CEP164Q9UPV0 1460 aa16.96■□□□□ 0.31
CHEK1-217ENST00000534685 FANCD2Q9BXW9 1451 aa16.94■□□□□ 0.3
CHEK1-217ENST00000534685 CFTRP13569 1480 aa16.88■□□□□ 0.29
CHEK1-217ENST00000534685 RSF1Q96T23 1441 aaPredicted RBP16.87■□□□□ 0.29
CHEK1-217ENST00000534685 DSG3P32926 999 aa16.85■□□□□ 0.29
CHEK1-217ENST00000534685 OSCARQ8IYS5 282 aa16.85■□□□□ 0.29
CHEK1-217ENST00000534685 SPINK5Q9NQ38 1064 aaPredicted RBP16.84■□□□□ 0.29
CHEK1-217ENST00000534685 URB2Q14146 1524 aaKnown RBP16.8■□□□□ 0.28
CHEK1-217ENST00000534685 TOP2AP11388 1531 aaKnown RBP16.8■□□□□ 0.28
CHEK1-217ENST00000534685 POTEHQ6S545 545 aa16.74■□□□□ 0.27
CHEK1-217ENST00000534685 CAPN15O75808 1086 aa16.71■□□□□ 0.27
CHEK1-217ENST00000534685 ZNF608Q9ULD9 1512 aaPredicted RBP16.65■□□□□ 0.26
CHEK1-217ENST00000534685 CCDC88BA6NC98 1476 aa16.65■□□□□ 0.26
CHEK1-217ENST00000534685 IFT140Q96RY7 1462 aa16.63■□□□□ 0.25
CHEK1-217ENST00000534685 SLC4A2P04920 1241 aa16.61■□□□□ 0.25
CHEK1-217ENST00000534685 TOPBP1Q92547 1522 aa16.59■□□□□ 0.25
CHEK1-217ENST00000534685 RIMBP3CA6NJZ7 1639 aa16.56■□□□□ 0.24
CHEK1-217ENST00000534685 RIMBP3BA6NNM3 1639 aa16.56■□□□□ 0.24
CHEK1-217ENST00000534685 RIMBP3Q9UFD9 1639 aa16.56■□□□□ 0.24
CHEK1-217ENST00000534685 ARHGEF11O15085 1522 aa16.53■□□□□ 0.24
CHEK1-217ENST00000534685 PRDM2Q13029 1718 aa16.51■□□□□ 0.23
CHEK1-217ENST00000534685 KCNA4P22459 653 aa16.5■□□□□ 0.23
CHEK1-217ENST00000534685 CYB5RLQ6IPT4 315 aa16.5■□□□□ 0.23
CHEK1-217ENST00000534685 ABCC8Q09428 1581 aa16.5■□□□□ 0.23
CHEK1-217ENST00000534685 AQRO60306 1485 aaKnown RBP eCLIP16.49■□□□□ 0.235e-8■■■■■ 34.4
CHEK1-217ENST00000534685 FBLN2P98095 1184 aa16.49■□□□□ 0.23
CHEK1-217ENST00000534685 EIF4G3O43432 1585 aaKnown RBP16.47■□□□□ 0.23
CHEK1-217ENST00000534685 DNMBPQ6XZF7 1577 aa16.47■□□□□ 0.23
CHEK1-217ENST00000534685 POLA1P09884 1462 aaPredicted RBP16.41■□□□□ 0.22
CHEK1-217ENST00000534685 TARBP1Q13395 1621 aaKnown RBP16.4■□□□□ 0.22
CHEK1-217ENST00000534685 TRHP20396 242 aaPredicted RBP16.39■□□□□ 0.21
CHEK1-217ENST00000534685 RAD54L2Q9Y4B4 1467 aa16.39■□□□□ 0.21
CHEK1-217ENST00000534685 TDRD9Q8NDG6 1382 aaKnown RBP16.38■□□□□ 0.21
CHEK1-217ENST00000534685 ARAP1Q96P48 1450 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms