Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
AP4B1Q9Y6B7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
AP4B1Q9Y6B7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
AP4B1Q9Y6B7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.37■□□□□ 0.85
AP4B1Q9Y6B7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
AP4B1Q9Y6B7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
AP4B1Q9Y6B7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
AP4B1Q9Y6B7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
AP4B1Q9Y6B7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.36■□□□□ 0.85
AP4B1Q9Y6B7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
AP4B1Q9Y6B7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
AP4B1Q9Y6B7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
AP4B1Q9Y6B7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.36■□□□□ 0.85
AP4B1Q9Y6B7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
AP4B1Q9Y6B7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
AP4B1Q9Y6B7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
AP4B1Q9Y6B7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
AP4B1Q9Y6B7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.36■□□□□ 0.85
AP4B1Q9Y6B7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
AP4B1Q9Y6B7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
AP4B1Q9Y6B7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.35■□□□□ 0.85
AP4B1Q9Y6B7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
AP4B1Q9Y6B7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
AP4B1Q9Y6B7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
AP4B1Q9Y6B7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
AP4B1Q9Y6B7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.35■□□□□ 0.85
AP4B1Q9Y6B7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
AP4B1Q9Y6B7 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.35■□□□□ 0.85
AP4B1Q9Y6B7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
AP4B1Q9Y6B7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
AP4B1Q9Y6B7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
AP4B1Q9Y6B7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
AP4B1Q9Y6B7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.34■□□□□ 0.85
AP4B1Q9Y6B7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP4B1Q9Y6B7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP4B1Q9Y6B7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP4B1Q9Y6B7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP4B1Q9Y6B7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP4B1Q9Y6B7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.34■□□□□ 0.85
AP4B1Q9Y6B7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.34■□□□□ 0.85
AP4B1Q9Y6B7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.34■□□□□ 0.85
AP4B1Q9Y6B7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP4B1Q9Y6B7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.34■□□□□ 0.85
AP4B1Q9Y6B7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP4B1Q9Y6B7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
AP4B1Q9Y6B7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
AP4B1Q9Y6B7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
AP4B1Q9Y6B7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
AP4B1Q9Y6B7 C17orf82-201ENST00000623772 1530 ntBASIC20.33■□□□□ 0.85
AP4B1Q9Y6B7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
AP4B1Q9Y6B7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
AP4B1Q9Y6B7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.33■□□□□ 0.85
AP4B1Q9Y6B7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
AP4B1Q9Y6B7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.33■□□□□ 0.85
AP4B1Q9Y6B7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
AP4B1Q9Y6B7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.33■□□□□ 0.85
AP4B1Q9Y6B7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
AP4B1Q9Y6B7 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
AP4B1Q9Y6B7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.32■□□□□ 0.84
AP4B1Q9Y6B7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
AP4B1Q9Y6B7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
AP4B1Q9Y6B7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
AP4B1Q9Y6B7 AC092171.4-201ENST00000609130 632 ntBASIC20.32■□□□□ 0.84
AP4B1Q9Y6B7 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
AP4B1Q9Y6B7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
AP4B1Q9Y6B7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.32■□□□□ 0.84
AP4B1Q9Y6B7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.32■□□□□ 0.84
AP4B1Q9Y6B7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
AP4B1Q9Y6B7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.31■□□□□ 0.84
AP4B1Q9Y6B7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.31■□□□□ 0.84
AP4B1Q9Y6B7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
AP4B1Q9Y6B7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
AP4B1Q9Y6B7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.31■□□□□ 0.84
AP4B1Q9Y6B7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
AP4B1Q9Y6B7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
AP4B1Q9Y6B7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
AP4B1Q9Y6B7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
AP4B1Q9Y6B7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
AP4B1Q9Y6B7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.31■□□□□ 0.84
AP4B1Q9Y6B7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
AP4B1Q9Y6B7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.31■□□□□ 0.84
AP4B1Q9Y6B7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
AP4B1Q9Y6B7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
AP4B1Q9Y6B7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
AP4B1Q9Y6B7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
AP4B1Q9Y6B7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.31■□□□□ 0.84
AP4B1Q9Y6B7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
AP4B1Q9Y6B7 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
AP4B1Q9Y6B7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.31■□□□□ 0.84
AP4B1Q9Y6B7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
AP4B1Q9Y6B7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
AP4B1Q9Y6B7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
AP4B1Q9Y6B7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.3■□□□□ 0.84
AP4B1Q9Y6B7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
AP4B1Q9Y6B7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
AP4B1Q9Y6B7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.3■□□□□ 0.84
AP4B1Q9Y6B7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
AP4B1Q9Y6B7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
AP4B1Q9Y6B7 AC241377.3-202ENST00000626088 1088 ntBASIC20.3■□□□□ 0.84
AP4B1Q9Y6B7 AC241585.3-202ENST00000628937 1088 ntBASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms