Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRIM2P49643 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRIM2P49643 UNC93B3-201ENST00000308076 687 ntBASIC20.22■□□□□ 0.83
PRIM2P49643 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PRIM2P49643 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRIM2P49643 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PRIM2P49643 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PRIM2P49643 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
PRIM2P49643 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PRIM2P49643 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRIM2P49643 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
PRIM2P49643 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRIM2P49643 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.21■□□□□ 0.83
PRIM2P49643 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.21■□□□□ 0.83
PRIM2P49643 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PRIM2P49643 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRIM2P49643 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRIM2P49643 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRIM2P49643 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRIM2P49643 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PRIM2P49643 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRIM2P49643 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.21■□□□□ 0.83
PRIM2P49643 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.21■□□□□ 0.83
PRIM2P49643 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.21■□□□□ 0.83
PRIM2P49643 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.21■□□□□ 0.83
PRIM2P49643 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.21■□□□□ 0.83
PRIM2P49643 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.21■□□□□ 0.83
PRIM2P49643 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PRIM2P49643 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PRIM2P49643 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.21■□□□□ 0.83
PRIM2P49643 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.21■□□□□ 0.83
PRIM2P49643 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRIM2P49643 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PRIM2P49643 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
PRIM2P49643 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
PRIM2P49643 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRIM2P49643 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PRIM2P49643 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PRIM2P49643 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.2■□□□□ 0.82
PRIM2P49643 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.2■□□□□ 0.82
PRIM2P49643 OR7E47P-201ENST00000546390 1422 ntBASIC20.2■□□□□ 0.82
PRIM2P49643 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PRIM2P49643 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRIM2P49643 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.2■□□□□ 0.82
PRIM2P49643 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.2■□□□□ 0.82
PRIM2P49643 SLC47A1P1-202ENST00000449666 945 ntBASIC20.2■□□□□ 0.82
PRIM2P49643 AP005435.1-201ENST00000529293 1178 ntBASIC20.2■□□□□ 0.82
PRIM2P49643 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.2■□□□□ 0.82
PRIM2P49643 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRIM2P49643 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
PRIM2P49643 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PRIM2P49643 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRIM2P49643 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRIM2P49643 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRIM2P49643 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRIM2P49643 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRIM2P49643 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
PRIM2P49643 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.19■□□□□ 0.82
PRIM2P49643 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRIM2P49643 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.19■□□□□ 0.82
PRIM2P49643 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRIM2P49643 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.19■□□□□ 0.82
PRIM2P49643 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.19■□□□□ 0.82
PRIM2P49643 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.19■□□□□ 0.82
PRIM2P49643 AL136162.1-201ENST00000607711 1078 ntBASIC20.19■□□□□ 0.82
PRIM2P49643 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRIM2P49643 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRIM2P49643 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PRIM2P49643 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRIM2P49643 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.19■□□□□ 0.82
PRIM2P49643 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRIM2P49643 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRIM2P49643 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PRIM2P49643 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRIM2P49643 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRIM2P49643 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PRIM2P49643 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRIM2P49643 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PRIM2P49643 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRIM2P49643 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRIM2P49643 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRIM2P49643 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.18■□□□□ 0.82
PRIM2P49643 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
PRIM2P49643 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRIM2P49643 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.18■□□□□ 0.82
PRIM2P49643 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.18■□□□□ 0.82
PRIM2P49643 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.18■□□□□ 0.82
PRIM2P49643 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
PRIM2P49643 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
PRIM2P49643 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.18■□□□□ 0.82
PRIM2P49643 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.17■□□□□ 0.82
PRIM2P49643 OXCT2P1-201ENST00000447263 1535 ntBASIC20.17■□□□□ 0.82
PRIM2P49643 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PRIM2P49643 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRIM2P49643 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRIM2P49643 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.17■□□□□ 0.82
PRIM2P49643 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PRIM2P49643 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRIM2P49643 MIR4767-201ENST00000582827 78 ntBASIC20.17■□□□□ 0.82
PRIM2P49643 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms