Protein–RNA interactions for Protein: P48547

KCNC1, Potassium voltage-gated channel subfamily C member 1, humanhuman

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1P48547 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
KCNC1P48547 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
KCNC1P48547 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.94■□□□□ 0.94
KCNC1P48547 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
KCNC1P48547 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.94■□□□□ 0.94
KCNC1P48547 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KCNC1P48547 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KCNC1P48547 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
KCNC1P48547 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.94■□□□□ 0.94
KCNC1P48547 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KCNC1P48547 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KCNC1P48547 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
KCNC1P48547 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
KCNC1P48547 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KCNC1P48547 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.93■□□□□ 0.94
KCNC1P48547 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KCNC1P48547 AC104564.3-201ENST00000582367 638 ntBASIC20.93■□□□□ 0.94
KCNC1P48547 SMUG1P1-201ENST00000590640 811 ntBASIC20.93■□□□□ 0.94
KCNC1P48547 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KCNC1P48547 AC233992.3-201ENST00000607491 485 ntBASIC20.93■□□□□ 0.94
KCNC1P48547 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KCNC1P48547 AL024507.2-201ENST00000606070 2574 ntBASIC20.93■□□□□ 0.94
KCNC1P48547 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
KCNC1P48547 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KCNC1P48547 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KCNC1P48547 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
KCNC1P48547 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
KCNC1P48547 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KCNC1P48547 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KCNC1P48547 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
KCNC1P48547 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.92■□□□□ 0.94
KCNC1P48547 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNC1P48547 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.92■□□□□ 0.94
KCNC1P48547 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
KCNC1P48547 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNC1P48547 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNC1P48547 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.92■□□□□ 0.94
KCNC1P48547 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNC1P48547 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNC1P48547 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNC1P48547 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KCNC1P48547 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
KCNC1P48547 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.91■□□□□ 0.94
KCNC1P48547 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.91■□□□□ 0.94
KCNC1P48547 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.91■□□□□ 0.94
KCNC1P48547 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.91■□□□□ 0.94
KCNC1P48547 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.91■□□□□ 0.94
KCNC1P48547 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KCNC1P48547 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KCNC1P48547 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
KCNC1P48547 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNC1P48547 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KCNC1P48547 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNC1P48547 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNC1P48547 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNC1P48547 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNC1P48547 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.9■□□□□ 0.94
KCNC1P48547 AC135279.3-201ENST00000610945 1311 ntBASIC20.9■□□□□ 0.94
KCNC1P48547 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNC1P48547 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNC1P48547 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.9■□□□□ 0.94
KCNC1P48547 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.9■□□□□ 0.94
KCNC1P48547 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KCNC1P48547 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.9■□□□□ 0.94
KCNC1P48547 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNC1P48547 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
KCNC1P48547 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNC1P48547 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
KCNC1P48547 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
KCNC1P48547 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.89■□□□□ 0.94
KCNC1P48547 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.89■□□□□ 0.94
KCNC1P48547 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KCNC1P48547 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.89■□□□□ 0.94
KCNC1P48547 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
KCNC1P48547 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNC1P48547 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNC1P48547 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KCNC1P48547 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.89■□□□□ 0.93
KCNC1P48547 AL034346.1-201ENST00000568244 1277 ntBASIC20.89■□□□□ 0.93
KCNC1P48547 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KCNC1P48547 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.89■□□□□ 0.93
KCNC1P48547 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNC1P48547 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
KCNC1P48547 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KCNC1P48547 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNC1P48547 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KCNC1P48547 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KCNC1P48547 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNC1P48547 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.88■□□□□ 0.93
KCNC1P48547 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.88■□□□□ 0.93
KCNC1P48547 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.88■□□□□ 0.93
KCNC1P48547 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.88■□□□□ 0.93
KCNC1P48547 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNC1P48547 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNC1P48547 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.88■□□□□ 0.93
KCNC1P48547 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.88■□□□□ 0.93
KCNC1P48547 AC096631.2-201ENST00000436136 790 ntBASIC20.88■□□□□ 0.93
KCNC1P48547 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.88■□□□□ 0.93
KCNC1P48547 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.87■□□□□ 0.93
KCNC1P48547 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms