Protein–RNA interactions for Protein: O00453

LST1, Leukocyte-specific transcript 1 protein, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LST1O00453 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LST1O00453 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
LST1O00453 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LST1O00453 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LST1O00453 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LST1O00453 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LST1O00453 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
LST1O00453 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LST1O00453 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LST1O00453 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LST1O00453 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LST1O00453 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LST1O00453 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC13.88□□□□□ -0.19
LST1O00453 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LST1O00453 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LST1O00453 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LST1O00453 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
LST1O00453 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LST1O00453 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LST1O00453 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
LST1O00453 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LST1O00453 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LST1O00453 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LST1O00453 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LST1O00453 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC13.88□□□□□ -0.19
LST1O00453 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC13.88□□□□□ -0.19
LST1O00453 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC13.88□□□□□ -0.19
LST1O00453 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LST1O00453 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LST1O00453 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LST1O00453 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
LST1O00453 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LST1O00453 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC13.88□□□□□ -0.19
LST1O00453 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC13.88□□□□□ -0.19
LST1O00453 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC13.88□□□□□ -0.19
LST1O00453 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LST1O00453 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LST1O00453 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC13.88□□□□□ -0.19
LST1O00453 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LST1O00453 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC13.88□□□□□ -0.19
LST1O00453 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LST1O00453 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC13.88□□□□□ -0.19
LST1O00453 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LST1O00453 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LST1O00453 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LST1O00453 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LST1O00453 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC13.87□□□□□ -0.19
LST1O00453 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC13.87□□□□□ -0.19
LST1O00453 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC13.87□□□□□ -0.19
LST1O00453 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LST1O00453 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC13.87□□□□□ -0.19
LST1O00453 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LST1O00453 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LST1O00453 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LST1O00453 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LST1O00453 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC13.87□□□□□ -0.19
LST1O00453 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LST1O00453 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LST1O00453 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LST1O00453 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LST1O00453 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LST1O00453 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LST1O00453 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
LST1O00453 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC13.87□□□□□ -0.19
LST1O00453 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC13.87□□□□□ -0.19
LST1O00453 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LST1O00453 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
LST1O00453 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
LST1O00453 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC13.87□□□□□ -0.19
LST1O00453 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC13.86□□□□□ -0.19
LST1O00453 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LST1O00453 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LST1O00453 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LST1O00453 ME2-216ENST00000639850 2331 ntTSL 5 BASIC13.86□□□□□ -0.19
LST1O00453 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LST1O00453 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LST1O00453 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LST1O00453 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LST1O00453 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LST1O00453 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LST1O00453 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LST1O00453 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
LST1O00453 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
LST1O00453 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LST1O00453 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LST1O00453 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LST1O00453 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LST1O00453 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LST1O00453 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LST1O00453 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LST1O00453 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LST1O00453 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LST1O00453 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LST1O00453 AC073314.1-201ENST00000568729 2216 ntBASIC13.86□□□□□ -0.19
LST1O00453 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LST1O00453 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
LST1O00453 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC13.85□□□□□ -0.19
LST1O00453 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LST1O00453 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC13.85□□□□□ -0.19
LST1O00453 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms