Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC074050.4-201ENST00000614576 533 ntBASIC10.59□□□□□ -0.71
P04436 FSCN3-201ENST00000265825 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P04436 PFDN1-201ENST00000261813 1352 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P04436 FOSB-202ENST00000417353 3667 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
P04436 USP17L4-201ENST00000526929 1593 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
P04436 USP17L1-201ENST00000529559 1593 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
P04436 USP17L3-201ENST00000530484 1593 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
P04436 KCNK5-201ENST00000359534 3756 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P04436 AL133216.2-201ENST00000622550 7213 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
P04436 LRRC55-201ENST00000497933 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P04436 KANK4-203ENST00000371150 3023 ntTSL 2 BASIC10.59□□□□□ -0.71
P04436 MFAP4-201ENST00000299610 1873 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
P04436 DDX3P1-201ENST00000418231 1950 ntBASIC10.59□□□□□ -0.71
P04436 PPP1CC-204ENST00000546933 2154 ntTSL 3 BASIC10.59□□□□□ -0.71
P04436 CATSPERG-202ENST00000409235 3746 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.71
P04436 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC10.59□□□□□ -0.71
P04436 SLC13A3-201ENST00000279027 4017 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P04436 ITIH1-211ENST00000537050 2493 ntTSL 2 BASIC10.59□□□□□ -0.71
P04436 LAMA4-205ENST00000389463 6297 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
P04436 NPC1L1-201ENST00000289547 5048 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
P04436 SIGLEC11-203ENST00000447370 3173 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P04436 CCDC89-201ENST00000316398 1412 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
P04436 AC122129.1-201ENST00000354746 1815 ntBASIC10.58□□□□□ -0.72
P04436 PABPC1P11-201ENST00000428966 2007 ntBASIC10.58□□□□□ -0.72
P04436 SRP68-212ENST00000602720 2037 ntTSL 2 BASIC10.58□□□□□ -0.72
P04436 SH3PXD2A-AS1-202ENST00000627886 2027 ntTSL 4 BASIC10.58□□□□□ -0.72
P04436 DNAI2-206ENST00000582036 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04436 ENDOU-201ENST00000229003 2332 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P04436 CLP1-205ENST00000533682 2435 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04436 LINC02288-201ENST00000500215 2924 ntTSL 2 BASIC10.58□□□□□ -0.72
P04436 PREX2-201ENST00000288368 10750 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04436 VPS39-201ENST00000318006 4844 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04436 GALNT15-201ENST00000339732 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04436 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04436 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
P04436 PPP4R1L-201ENST00000244070 1474 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P04436 UCP1-201ENST00000262999 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04436 ACTN4P1-201ENST00000514175 1451 ntBASIC10.58□□□□□ -0.72
P04436 CAPRIN2-201ENST00000298892 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04436 KRTAP20-1-201ENST00000334664 275 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
P04436 LINC00619-201ENST00000374432 1121 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P04436 KCNIP1-202ENST00000377360 1197 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P04436 MRPS21P6-201ENST00000415184 261 ntBASIC10.58□□□□□ -0.72
P04436 OR10AA1P-201ENST00000417823 937 ntBASIC10.58□□□□□ -0.72
P04436 AC007163.1-201ENST00000447972 877 ntTSL 5 BASIC10.58□□□□□ -0.72
P04436 AC122683.1-201ENST00000456335 717 ntTSL 3 BASIC10.58□□□□□ -0.72
P04436 CGGBP1-203ENST00000462901 1063 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04436 RPSAP3-201ENST00000464073 887 ntBASIC10.58□□□□□ -0.72
P04436 LSP1P2-201ENST00000479042 133 ntBASIC10.58□□□□□ -0.72
P04436 RN7SL771P-201ENST00000482328 298 ntBASIC10.58□□□□□ -0.72
P04436 AC073578.1-201ENST00000535133 493 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P04436 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC10.58□□□□□ -0.72
P04436 LINC00648-204ENST00000557749 443 ntTSL 5 BASIC10.58□□□□□ -0.72
P04436 AC051619.1-201ENST00000560007 616 ntBASIC10.58□□□□□ -0.72
P04436 AC021439.1-201ENST00000562975 591 ntTSL 4 BASIC10.58□□□□□ -0.72
P04436 KRT18P18-201ENST00000565278 1279 ntBASIC10.58□□□□□ -0.72
P04436 AL160291.1-201ENST00000574842 1002 ntTSL 2 BASIC10.58□□□□□ -0.72
P04436 AC145207.4-201ENST00000583521 450 ntTSL 5 BASIC10.58□□□□□ -0.72
P04436 HKR1-222ENST00000591417 525 ntTSL 4 BASIC10.58□□□□□ -0.72
P04436 AC097534.2-204ENST00000608892 284 ntTSL 2 BASIC10.58□□□□□ -0.72
P04436 CTCFL-209ENST00000433949 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04436 FGFR1OP-207ENST00000622353 3451 ntTSL 2 BASIC10.58□□□□□ -0.72
P04436 CDK5RAP1-210ENST00000473997 1930 ntTSL 2 BASIC10.58□□□□□ -0.72
P04436 VPS33B-201ENST00000333371 2767 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04436 DCLK2-202ENST00000302176 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04436 LILRB2-201ENST00000314446 2397 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04436 LONRF2-202ENST00000409647 2363 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
P04436 FLNB-201ENST00000295956 9463 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04436 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04436 EXTL2-207ENST00000535414 3146 ntTSL 5 BASIC10.58□□□□□ -0.72
P04436 FNBP4-201ENST00000263773 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04436 TRAK1-202ENST00000341421 4620 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P04436 CTLA4-202ENST00000302823 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04436 ZNF326-201ENST00000340281 2729 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04436 TACR1-201ENST00000305249 4959 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04436 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P04436 PSAPL1-201ENST00000319098 4680 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
P04436 ZFP1-203ENST00000464850 3067 ntTSL 2 BASIC10.57□□□□□ -0.72
P04436 LGALS8-206ENST00000366584 4369 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04436 POTEB2-202ENST00000454856 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04436 CECR2-204ENST00000400585 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04436 PDE4C-210ENST00000597297 1559 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P04436 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04436 MOB4-202ENST00000323303 3986 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04436 UBL7-204ENST00000564488 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04436 MIEF1-203ENST00000404569 3797 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
P04436 ICOSLG-204ENST00000407780 7080 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04436 HPS1-204ENST00000361490 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04436 PAAF1-210ENST00000541951 1383 ntTSL 2 BASIC10.57□□□□□ -0.72
P04436 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC10.57□□□□□ -0.72
P04436 ILK-215ENST00000537806 1801 ntTSL 5 BASIC10.57□□□□□ -0.72
P04436 PFN1P2-201ENST00000604437 1834 ntBASIC10.57□□□□□ -0.72
P04436 LST1-201ENST00000211921 504 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P04436 SUCLG2P2-201ENST00000307241 1296 ntBASIC10.57□□□□□ -0.72
P04436 TREM2-201ENST00000338469 860 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04436 AL354979.1-201ENST00000369027 266 ntTSL 3 BASIC10.57□□□□□ -0.72
P04436 GSTM2-202ENST00000369827 1073 ntTSL 5 BASIC10.57□□□□□ -0.72
P04436 TBCA-202ENST00000380377 683 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04436 SGO1-204ENST00000417364 1075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04436 SWI5-204ENST00000419867 1048 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms