RNA–Protein interactions for RNA: ENST00000533682.1

CLP1-205, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 2,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-205ENST00000533682 NISCHQ9Y2I1 1504 aa26.08■■□□□ 1.77
CLP1-205ENST00000533682 CCDC180Q9P1Z9 1646 aa22.38■■□□□ 1.17
CLP1-205ENST00000533682 ZCCHC6Q5VYS8 1495 aaKnown RBP21.94■■□□□ 1.1
CLP1-205ENST00000533682 SHROOM4Q9ULL8 1493 aa21.91■■□□□ 1.1
CLP1-205ENST00000533682 DCAF8L2P0C7V8 631 aa21.82■■□□□ 1.08
CLP1-205ENST00000533682 DCAF1Q9Y4B6 1507 aa21.37■■□□□ 1.01
CLP1-205ENST00000533682 SUPT5HO00267 1087 aaKnown RBP21.24■□□□□ 0.99
CLP1-205ENST00000533682 ABCC9O60706 1549 aa21.22■□□□□ 0.99
CLP1-205ENST00000533682 MYO15BQ96JP2 1530 aa20.93■□□□□ 0.94
CLP1-205ENST00000533682 SCRIBQ14160 1630 aa20.93■□□□□ 0.94
CLP1-205ENST00000533682 NACADO15069 1562 aa20.82■□□□□ 0.92
CLP1-205ENST00000533682 RB1CC1Q8TDY2 1594 aa20.59■□□□□ 0.89
CLP1-205ENST00000533682 RSF1Q96T23 1441 aaPredicted RBP20.46■□□□□ 0.87
CLP1-205ENST00000533682 CECR2Q9BXF3 1484 aa20.42■□□□□ 0.86
CLP1-205ENST00000533682 CHIC1Q5VXU3 224 aa20.39■□□□□ 0.86
CLP1-205ENST00000533682 UNC13AQ9UPW8 1703 aa20.34■□□□□ 0.85
CLP1-205ENST00000533682 MROH2BQ7Z745 1585 aa20.27■□□□□ 0.84
CLP1-205ENST00000533682 PABPN1Q86U42 306 aaKnown RBP eCLIP20.22■□□□□ 0.83
CLP1-205ENST00000533682 WIZO95785 1651 aa20.15■□□□□ 0.82
CLP1-205ENST00000533682 BICRAQ9NZM4 1560 aa20.09■□□□□ 0.81
CLP1-205ENST00000533682 BAZ1AQ9NRL2 1556 aaPredicted RBP20.05■□□□□ 0.8
CLP1-205ENST00000533682 SMARCA4P51532 1647 aa19.97■□□□□ 0.79
CLP1-205ENST00000533682 LOC105371045A0A1W2PR82 267 aa19.81■□□□□ 0.76
CLP1-205ENST00000533682 TRIM41Q8WV44 630 aa19.8■□□□□ 0.76
CLP1-205ENST00000533682 TOP2AP11388 1531 aaKnown RBP19.77■□□□□ 0.76
CLP1-205ENST00000533682 CCDC88BA6NC98 1476 aa19.72■□□□□ 0.75
CLP1-205ENST00000533682 SMARCA2P51531 1590 aa19.67■□□□□ 0.74
CLP1-205ENST00000533682 FAM9AQ8IZU1 332 aaPredicted RBP19.65■□□□□ 0.74
CLP1-205ENST00000533682 EIF4G1Q04637 1599 aaKnown RBP19.61■□□□□ 0.73
CLP1-205ENST00000533682 PEG3Q9GZU2 1588 aa19.59■□□□□ 0.73
CLP1-205ENST00000533682 ATAD2BQ9ULI0 1458 aa19.58■□□□□ 0.73
CLP1-205ENST00000533682 EHMT2Q96KQ7 1210 aa19.53■□□□□ 0.72
CLP1-205ENST00000533682 ABCC8Q09428 1581 aa19.51■□□□□ 0.71
CLP1-205ENST00000533682 BAZ1BQ9UIG0 1483 aaKnown RBP19.49■□□□□ 0.71
CLP1-205ENST00000533682 NCAPD3P42695 1498 aa19.28■□□□□ 0.68
CLP1-205ENST00000533682 PCGF6Q9BYE7 350 aa19.24■□□□□ 0.67
CLP1-205ENST00000533682 SOGA1O94964 1423 aa19.23■□□□□ 0.67
CLP1-205ENST00000533682 HMGXB3Q12766 1538 aa19.21■□□□□ 0.67
CLP1-205ENST00000533682 WRNQ14191 1432 aaPredicted RBP eCLIP19.21■□□□□ 0.67
CLP1-205ENST00000533682 RUSC2Q8N2Y8 1516 aa19.18■□□□□ 0.66
CLP1-205ENST00000533682 SYNJ1O43426 1573 aa19.16■□□□□ 0.66
CLP1-205ENST00000533682 CC2D2AQ9P2K1 1620 aa19.1■□□□□ 0.65
CLP1-205ENST00000533682 CSRNP3Q8WYN3 585 aa19.05■□□□□ 0.64
CLP1-205ENST00000533682 CFTRP13569 1480 aa18.99■□□□□ 0.63
CLP1-205ENST00000533682 PPARGC1BQ86YN6 1023 aaKnown RBP18.96■□□□□ 0.63
CLP1-205ENST00000533682 TRIM26Q12899 539 aaPredicted RBP18.95■□□□□ 0.62
CLP1-205ENST00000533682 EEA1Q15075 1411 aa18.95■□□□□ 0.62
CLP1-205ENST00000533682 TOP2BQ02880 1626 aa18.94■□□□□ 0.62
CLP1-205ENST00000533682 UBTFP17480 764 aaKnown RBP18.94■□□□□ 0.62
CLP1-205ENST00000533682 CUX1P39880 1505 aa18.9■□□□□ 0.62
CLP1-205ENST00000533682 CADPSQ9ULU8 1353 aa18.89■□□□□ 0.61
CLP1-205ENST00000533682 BIVM-ERCC5R4GMW8 1640 aa18.88■□□□□ 0.61
CLP1-205ENST00000533682 DNAJC5BQ9UF47 199 aa18.87■□□□□ 0.61
CLP1-205ENST00000533682 CEP162Q5TB80 1403 aa18.86■□□□□ 0.61
CLP1-205ENST00000533682 TNIKQ9UKE5 1360 aa18.85■□□□□ 0.61
CLP1-205ENST00000533682 HRCP23327 699 aa18.83■□□□□ 0.61
CLP1-205ENST00000533682 GOLGA3Q08378 1498 aa18.83■□□□□ 0.6
CLP1-205ENST00000533682 PRDM2Q13029 1718 aa18.8■□□□□ 0.6
CLP1-205ENST00000533682 CEP164Q9UPV0 1460 aa18.77■□□□□ 0.6
CLP1-205ENST00000533682 NESP48681 1621 aa18.77■□□□□ 0.6
CLP1-205ENST00000533682 RAPGEF2Q9Y4G8 1499 aa18.77■□□□□ 0.6
CLP1-205ENST00000533682 KIF21BO75037 1637 aa18.75■□□□□ 0.59
CLP1-205ENST00000533682 RANGAP1P46060 587 aaPredicted RBP18.74■□□□□ 0.59
CLP1-205ENST00000533682 TTBK1Q5TCY1 1321 aaPredicted RBP18.74■□□□□ 0.59
CLP1-205ENST00000533682 FANCD2Q9BXW9 1451 aa18.7■□□□□ 0.58
CLP1-205ENST00000533682 KIF27Q86VH2 1401 aa18.65■□□□□ 0.58
CLP1-205ENST00000533682 FGD5Q6ZNL6 1462 aa18.63■□□□□ 0.57
CLP1-205ENST00000533682 PRXQ9BXM0 1461 aa18.62■□□□□ 0.57
CLP1-205ENST00000533682 CLIP1P30622 1438 aa18.61■□□□□ 0.57
CLP1-205ENST00000533682 CUX2O14529 1486 aa18.6■□□□□ 0.57
CLP1-205ENST00000533682 IGF1RP08069 1367 aa18.54■□□□□ 0.56
CLP1-205ENST00000533682 RAD54L2Q9Y4B4 1467 aa18.53■□□□□ 0.56
CLP1-205ENST00000533682 ERICH3Q5RHP9 1530 aa18.53■□□□□ 0.56
CLP1-205ENST00000533682 LAMC3Q9Y6N6 1575 aa18.53■□□□□ 0.56
CLP1-205ENST00000533682 TOPBP1Q92547 1522 aa18.52■□□□□ 0.56
CLP1-205ENST00000533682 DNMBPQ6XZF7 1577 aa18.5■□□□□ 0.55
CLP1-205ENST00000533682 POLA1P09884 1462 aaPredicted RBP18.49■□□□□ 0.55
CLP1-205ENST00000533682 URB2Q14146 1524 aaKnown RBP18.47■□□□□ 0.55
CLP1-205ENST00000533682 VPS8Q8N3P4 1428 aa18.45■□□□□ 0.54
CLP1-205ENST00000533682 CARMIL1Q5VZK9 1371 aa18.43■□□□□ 0.54
CLP1-205ENST00000533682 KIF21AQ7Z4S6 1674 aa18.43■□□□□ 0.54
CLP1-205ENST00000533682 PDS5BQ9NTI5 1447 aa18.43■□□□□ 0.54
CLP1-205ENST00000533682 ARAP1Q96P48 1450 aa18.39■□□□□ 0.53
CLP1-205ENST00000533682 ABCA10Q8WWZ4 1543 aa18.38■□□□□ 0.53
CLP1-205ENST00000533682 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.37■□□□□ 0.53
CLP1-205ENST00000533682 TDRD9Q8NDG6 1382 aaKnown RBP18.35■□□□□ 0.53
CLP1-205ENST00000533682 APLP2Q06481 763 aa18.34■□□□□ 0.53
CLP1-205ENST00000533682 ARHGAP35Q9NRY4 1499 aa18.32■□□□□ 0.52
CLP1-205ENST00000533682 PELP1Q8IZL8 1130 aaKnown RBP18.29■□□□□ 0.52
CLP1-205ENST00000533682 KANK4Q5T7N3 995 aaPredicted RBP18.27■□□□□ 0.52
CLP1-205ENST00000533682 WDR97A6NE52 1622 aa18.27■□□□□ 0.51
CLP1-205ENST00000533682 P3H3Q8IVL6 736 aa18.26■□□□□ 0.51
CLP1-205ENST00000533682 CCER1Q8TC90 406 aaPredicted RBP18.23■□□□□ 0.51
CLP1-205ENST00000533682 ZEB1P37275 1124 aaPredicted RBP18.22■□□□□ 0.51
CLP1-205ENST00000533682 HNRNPUL2Q1KMD3 747 aaKnown RBP18.22■□□□□ 0.51
CLP1-205ENST00000533682 GAPVD1Q14C86 1478 aa18.22■□□□□ 0.51
CLP1-205ENST00000533682 ABCA5Q8WWZ7 1642 aa18.2■□□□□ 0.5
CLP1-205ENST00000533682 TARBP1Q13395 1621 aaKnown RBP18.19■□□□□ 0.5
CLP1-205ENST00000533682 CUL7Q14999 1698 aa18.17■□□□□ 0.5
CLP1-205ENST00000533682 MRC2Q9UBG0 1479 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms