RNA–Protein interactions for RNA: ENST00000500215.3

LINC02288-201, Transcript of long intergenic non-protein coding RNA 2288, humanhuman

TSL 2 BASIC

Gene LINC02288, Length 2,924 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02288-201ENST00000500215 NISCHQ9Y2I1 1504 aa26.58■■□□□ 1.85
LINC02288-201ENST00000500215 CCDC180Q9P1Z9 1646 aa23.04■■□□□ 1.28
LINC02288-201ENST00000500215 DCAF8L2P0C7V8 631 aa22.51■■□□□ 1.19
LINC02288-201ENST00000500215 ABCC9O60706 1549 aa22.36■■□□□ 1.17
LINC02288-201ENST00000500215 ZCCHC6Q5VYS8 1495 aaKnown RBP22.28■■□□□ 1.16
LINC02288-201ENST00000500215 SHROOM4Q9ULL8 1493 aa22.09■■□□□ 1.13
LINC02288-201ENST00000500215 DCAF1Q9Y4B6 1507 aa21.74■■□□□ 1.07
LINC02288-201ENST00000500215 NACADO15069 1562 aa21.55■■□□□ 1.04
LINC02288-201ENST00000500215 SCRIBQ14160 1630 aa21.54■■□□□ 1.04
LINC02288-201ENST00000500215 MYO15BQ96JP2 1530 aa21.47■■□□□ 1.03
LINC02288-201ENST00000500215 RB1CC1Q8TDY2 1594 aa21.45■■□□□ 1.03
LINC02288-201ENST00000500215 PABPN1Q86U42 306 aaKnown RBP eCLIP21.19■□□□□ 0.98
LINC02288-201ENST00000500215 SUPT5HO00267 1087 aaKnown RBP21.15■□□□□ 0.98
LINC02288-201ENST00000500215 UNC13AQ9UPW8 1703 aa21.13■□□□□ 0.97
LINC02288-201ENST00000500215 BICRAQ9NZM4 1560 aa20.9■□□□□ 0.94
LINC02288-201ENST00000500215 CECR2Q9BXF3 1484 aa20.87■□□□□ 0.93
LINC02288-201ENST00000500215 RSF1Q96T23 1441 aaPredicted RBP20.66■□□□□ 0.9
LINC02288-201ENST00000500215 MROH2BQ7Z745 1585 aa20.66■□□□□ 0.9
LINC02288-201ENST00000500215 WIZO95785 1651 aa20.51■□□□□ 0.87
LINC02288-201ENST00000500215 BAZ1AQ9NRL2 1556 aaPredicted RBP20.49■□□□□ 0.87
LINC02288-201ENST00000500215 SMARCA4P51532 1647 aa20.47■□□□□ 0.87
LINC02288-201ENST00000500215 EIF4G1Q04637 1599 aaKnown RBP20.29■□□□□ 0.84
LINC02288-201ENST00000500215 ATAD2BQ9ULI0 1458 aa20.2■□□□□ 0.82
LINC02288-201ENST00000500215 TOP2AP11388 1531 aaKnown RBP20.12■□□□□ 0.81
LINC02288-201ENST00000500215 BAZ1BQ9UIG0 1483 aaKnown RBP20.1■□□□□ 0.81
LINC02288-201ENST00000500215 CC2D2AQ9P2K1 1620 aa20.07■□□□□ 0.8
LINC02288-201ENST00000500215 SMARCA2P51531 1590 aa20.07■□□□□ 0.8
LINC02288-201ENST00000500215 PEG3Q9GZU2 1588 aa20.06■□□□□ 0.8
LINC02288-201ENST00000500215 CCDC88BA6NC98 1476 aa20.03■□□□□ 0.8
LINC02288-201ENST00000500215 CHIC1Q5VXU3 224 aa19.99■□□□□ 0.79
LINC02288-201ENST00000500215 DNAJC5BQ9UF47 199 aa19.97■□□□□ 0.79
LINC02288-201ENST00000500215 NCAPD3P42695 1498 aa19.94■□□□□ 0.78
LINC02288-201ENST00000500215 HMGXB3Q12766 1538 aa19.85■□□□□ 0.77
LINC02288-201ENST00000500215 TRIM41Q8WV44 630 aa19.72■□□□□ 0.75
LINC02288-201ENST00000500215 ABCC8Q09428 1581 aa19.71■□□□□ 0.75
LINC02288-201ENST00000500215 FAM9AQ8IZU1 332 aaPredicted RBP19.62■□□□□ 0.73
LINC02288-201ENST00000500215 NESP48681 1621 aa19.6■□□□□ 0.73
LINC02288-201ENST00000500215 EHMT2Q96KQ7 1210 aa19.56■□□□□ 0.72
LINC02288-201ENST00000500215 CADPSQ9ULU8 1353 aa19.52■□□□□ 0.72
LINC02288-201ENST00000500215 CFTRP13569 1480 aa19.51■□□□□ 0.71
LINC02288-201ENST00000500215 WRNQ14191 1432 aaPredicted RBP eCLIP19.45■□□□□ 0.7
LINC02288-201ENST00000500215 LOC105371045A0A1W2PR82 267 aa19.43■□□□□ 0.7
LINC02288-201ENST00000500215 SYNJ1O43426 1573 aa19.41■□□□□ 0.7
LINC02288-201ENST00000500215 FANCD2Q9BXW9 1451 aa19.35■□□□□ 0.69
LINC02288-201ENST00000500215 SOGA1O94964 1423 aa19.31■□□□□ 0.68
LINC02288-201ENST00000500215 CUX1P39880 1505 aa19.29■□□□□ 0.68
LINC02288-201ENST00000500215 RUSC2Q8N2Y8 1516 aa19.29■□□□□ 0.68
LINC02288-201ENST00000500215 PRDM2Q13029 1718 aa19.28■□□□□ 0.68
LINC02288-201ENST00000500215 LAMC3Q9Y6N6 1575 aa19.27■□□□□ 0.67
LINC02288-201ENST00000500215 KIF21AQ7Z4S6 1674 aa19.22■□□□□ 0.67
LINC02288-201ENST00000500215 CEP164Q9UPV0 1460 aa19.21■□□□□ 0.67
LINC02288-201ENST00000500215 TOP2BQ02880 1626 aa19.2■□□□□ 0.66
LINC02288-201ENST00000500215 PDS5BQ9NTI5 1447 aa19.19■□□□□ 0.66
LINC02288-201ENST00000500215 BIVM-ERCC5R4GMW8 1640 aa19.14■□□□□ 0.65
LINC02288-201ENST00000500215 URB2Q14146 1524 aaKnown RBP19.13■□□□□ 0.65
LINC02288-201ENST00000500215 FGD5Q6ZNL6 1462 aa19.12■□□□□ 0.65
LINC02288-201ENST00000500215 ERCC6Q03468 1493 aa19.11■□□□□ 0.65
LINC02288-201ENST00000500215 TOPBP1Q92547 1522 aa19.1■□□□□ 0.65
LINC02288-201ENST00000500215 RAD54L2Q9Y4B4 1467 aa19.09■□□□□ 0.65
LINC02288-201ENST00000500215 CSRNP3Q8WYN3 585 aa19.07■□□□□ 0.64
LINC02288-201ENST00000500215 DNMBPQ6XZF7 1577 aa19.05■□□□□ 0.64
LINC02288-201ENST00000500215 POLA1P09884 1462 aaPredicted RBP19.03■□□□□ 0.64
LINC02288-201ENST00000500215 CUX2O14529 1486 aa19.01■□□□□ 0.63
LINC02288-201ENST00000500215 RANGAP1P46060 587 aaPredicted RBP18.98■□□□□ 0.63
LINC02288-201ENST00000500215 MRC2Q9UBG0 1479 aa18.97■□□□□ 0.63
LINC02288-201ENST00000500215 UBTFP17480 764 aaKnown RBP18.96■□□□□ 0.63
LINC02288-201ENST00000500215 TDRD9Q8NDG6 1382 aaKnown RBP18.95■□□□□ 0.62
LINC02288-201ENST00000500215 KIF27Q86VH2 1401 aa18.93■□□□□ 0.62
LINC02288-201ENST00000500215 EEA1Q15075 1411 aa18.9■□□□□ 0.62
LINC02288-201ENST00000500215 RAPGEF2Q9Y4G8 1499 aa18.87■□□□□ 0.61
LINC02288-201ENST00000500215 THOC2Q8NI27 1593 aaKnown RBP18.84■□□□□ 0.61
LINC02288-201ENST00000500215 IGF1RP08069 1367 aa18.82■□□□□ 0.6
LINC02288-201ENST00000500215 ABCA10Q8WWZ4 1543 aa18.82■□□□□ 0.6
LINC02288-201ENST00000500215 AQRO60306 1485 aaKnown RBP eCLIP18.82■□□□□ 0.6
LINC02288-201ENST00000500215 WDR62O43379 1518 aa18.82■□□□□ 0.6
LINC02288-201ENST00000500215 ZNF608Q9ULD9 1512 aaPredicted RBP18.81■□□□□ 0.6
LINC02288-201ENST00000500215 GOLGA3Q08378 1498 aa18.79■□□□□ 0.6
LINC02288-201ENST00000500215 TARBP1Q13395 1621 aaKnown RBP18.77■□□□□ 0.6
LINC02288-201ENST00000500215 GAPVD1Q14C86 1478 aa18.75■□□□□ 0.59
LINC02288-201ENST00000500215 CARMIL1Q5VZK9 1371 aa18.74■□□□□ 0.59
LINC02288-201ENST00000500215 WDR97A6NE52 1622 aa18.74■□□□□ 0.59
LINC02288-201ENST00000500215 PRXQ9BXM0 1461 aa18.74■□□□□ 0.59
LINC02288-201ENST00000500215 KIF21BO75037 1637 aa18.73■□□□□ 0.59
LINC02288-201ENST00000500215 PPARGC1BQ86YN6 1023 aaKnown RBP18.71■□□□□ 0.59
LINC02288-201ENST00000500215 CEP162Q5TB80 1403 aa18.7■□□□□ 0.58
LINC02288-201ENST00000500215 TNIKQ9UKE5 1360 aa18.69■□□□□ 0.58
LINC02288-201ENST00000500215 IFT140Q96RY7 1462 aa18.68■□□□□ 0.58
LINC02288-201ENST00000500215 ABCA5Q8WWZ7 1642 aa18.68■□□□□ 0.58
LINC02288-201ENST00000500215 TTBK1Q5TCY1 1321 aaPredicted RBP18.64■□□□□ 0.57
LINC02288-201ENST00000500215 FBLN2P98095 1184 aa18.63■□□□□ 0.57
LINC02288-201ENST00000500215 EIF4G3O43432 1585 aaKnown RBP18.61■□□□□ 0.57
LINC02288-201ENST00000500215 ERICH3Q5RHP9 1530 aa18.6■□□□□ 0.57
LINC02288-201ENST00000500215 PBRM1Q86U86 1689 aa18.59■□□□□ 0.57
LINC02288-201ENST00000500215 P3H3Q8IVL6 736 aa18.58■□□□□ 0.57
LINC02288-201ENST00000500215 CLIP1P30622 1438 aa18.57■□□□□ 0.56
LINC02288-201ENST00000500215 GRIN2BQ13224 1484 aa18.56■□□□□ 0.56
LINC02288-201ENST00000500215 SNAPC4Q5SXM2 1469 aa18.56■□□□□ 0.56
LINC02288-201ENST00000500215 CUL7Q14999 1698 aa18.52■□□□□ 0.55
LINC02288-201ENST00000500215 CHMP7Q8WUX9 453 aaPredicted RBP18.49■□□□□ 0.55
LINC02288-201ENST00000500215 ADAMTS12P58397 1594 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms