RNA–Protein interactions for RNA: ENST00000288368.4

PREX2-201, Transcript of phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREX2, Length 10,750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREX2-201ENST00000288368 DCAF8L2P0C7V8 631 aa18.95■□□□□ 0.62
PREX2-201ENST00000288368 SUPT5HO00267 1087 aaKnown RBP17.9■□□□□ 0.46
PREX2-201ENST00000288368 PELP1Q8IZL8 1130 aaKnown RBP17.73■□□□□ 0.43
PREX2-201ENST00000288368 SHROOM4Q9ULL8 1493 aa17.73■□□□□ 0.43
PREX2-201ENST00000288368 EHMT2Q96KQ7 1210 aa17.72■□□□□ 0.43
PREX2-201ENST00000288368 NISCHQ9Y2I1 1504 aa17.67■□□□□ 0.42
PREX2-201ENST00000288368 APLP2Q06481 763 aa17.38■□□□□ 0.37
PREX2-201ENST00000288368 TTBK1Q5TCY1 1321 aaPredicted RBP17.19■□□□□ 0.34
PREX2-201ENST00000288368 FAM9AQ8IZU1 332 aaPredicted RBP17.14■□□□□ 0.33
PREX2-201ENST00000288368 ERICH6Q7L0X2 663 aa17.03■□□□□ 0.32
PREX2-201ENST00000288368 RANGAP1P46060 587 aaPredicted RBP16.93■□□□□ 0.3
PREX2-201ENST00000288368 CCER1Q8TC90 406 aaPredicted RBP16.87■□□□□ 0.29
PREX2-201ENST00000288368 PCGF6Q9BYE7 350 aa16.87■□□□□ 0.29
PREX2-201ENST00000288368 CENPBP07199 599 aaPredicted RBP16.8■□□□□ 0.28
PREX2-201ENST00000288368 ATP1B4Q9UN42 357 aaPredicted RBP16.78■□□□□ 0.28
PREX2-201ENST00000288368 NEFLP07196 543 aa16.63■□□□□ 0.25
PREX2-201ENST00000288368 ZEB1P37275 1124 aaPredicted RBP16.6■□□□□ 0.25
PREX2-201ENST00000288368 YTHDC1Q96MU7 727 aaKnown RBP16.59■□□□□ 0.25
PREX2-201ENST00000288368 TRIM41Q8WV44 630 aa16.55■□□□□ 0.24
PREX2-201ENST00000288368 UBTFP17480 764 aaKnown RBP16.54■□□□□ 0.24
PREX2-201ENST00000288368 DAXXQ9UER7 740 aaPredicted RBP16.34■□□□□ 0.21
PREX2-201ENST00000288368 MYT1Q01538 1121 aa16.33■□□□□ 0.2
PREX2-201ENST00000288368 PPARGC1BQ86YN6 1023 aaKnown RBP16.27■□□□□ 0.19
PREX2-201ENST00000288368 MYT1LQ9UL68 1186 aa16.24■□□□□ 0.19
PREX2-201ENST00000288368 POLR3GLQ9BT43 218 aa16.24■□□□□ 0.19
PREX2-201ENST00000288368 CHIC1Q5VXU3 224 aa16.15■□□□□ 0.18
PREX2-201ENST00000288368 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.12■□□□□ 0.17
PREX2-201ENST00000288368 HNRNPUL2Q1KMD3 747 aaKnown RBP16.12■□□□□ 0.17
PREX2-201ENST00000288368 ITGAEP38570 1179 aa16.11■□□□□ 0.17
PREX2-201ENST00000288368 SLC4A1APQ9BWU0 796 aaKnown RBP16.05■□□□□ 0.16
PREX2-201ENST00000288368 CNGB1Q14028 1251 aaPredicted RBP16.05■□□□□ 0.16
PREX2-201ENST00000288368 ZNF316A6NFI3 1004 aaPredicted RBP15.99■□□□□ 0.15
PREX2-201ENST00000288368 TRIM26Q12899 539 aaPredicted RBP15.98■□□□□ 0.15
PREX2-201ENST00000288368 CLSPNQ9HAW4 1339 aa15.88■□□□□ 0.13
PREX2-201ENST00000288368 HRCP23327 699 aa15.83■□□□□ 0.13
PREX2-201ENST00000288368 RTL5Q5HYW3 569 aaPredicted RBP15.83■□□□□ 0.13
PREX2-201ENST00000288368 FAM50AQ14320 339 aaKnown RBP15.69■□□□□ 0.1
PREX2-201ENST00000288368 LOC105371045A0A1W2PR82 267 aa15.65■□□□□ 0.1
PREX2-201ENST00000288368 DIEXFQ68CQ4 756 aaKnown RBP15.6■□□□□ 0.09
PREX2-201ENST00000288368 TRIM52Q96A61 297 aa15.59■□□□□ 0.09
PREX2-201ENST00000288368 ZNF326Q5BKZ1 582 aaKnown RBP15.58■□□□□ 0.08
PREX2-201ENST00000288368 ZBTB47Q9UFB7 747 aaPredicted RBP15.58■□□□□ 0.08
PREX2-201ENST00000288368 SLC24A1O60721 1099 aa15.56■□□□□ 0.08
PREX2-201ENST00000288368 BCL11AQ9H165 835 aa15.55■□□□□ 0.08
PREX2-201ENST00000288368 NEUROD1Q13562 356 aa15.55■□□□□ 0.08
PREX2-201ENST00000288368 CANXP27824 592 aaKnown RBP15.53■□□□□ 0.08
PREX2-201ENST00000288368 BCANQ96GW7 911 aa15.52■□□□□ 0.08
PREX2-201ENST00000288368 ABCC9O60706 1549 aa15.43■□□□□ 0.06
PREX2-201ENST00000288368 ANP32CO43423 234 aa15.42■□□□□ 0.06
PREX2-201ENST00000288368 CDK11AQ9UQ88 783 aaPredicted RBP15.38■□□□□ 0.05
PREX2-201ENST00000288368 FBLN2P98095 1184 aa15.37■□□□□ 0.05
PREX2-201ENST00000288368 SCRIBQ14160 1630 aa15.35■□□□□ 0.05
PREX2-201ENST00000288368 NEFMP07197 916 aa15.33■□□□□ 0.04
PREX2-201ENST00000288368 PABPN1Q86U42 306 aaKnown RBP eCLIP15.31■□□□□ 0.04
PREX2-201ENST00000288368 GTF3C3Q9Y5Q9 886 aa15.26■□□□□ 0.03
PREX2-201ENST00000288368 ARID3CA6NKF2 412 aa15.26■□□□□ 0.03
PREX2-201ENST00000288368 ANP32AP39687 249 aaKnown RBP15.25■□□□□ 0.03
PREX2-201ENST00000288368 NPM2Q86SE8 214 aaKnown RBP15.2■□□□□ 0.02
PREX2-201ENST00000288368 HSP90AA1P07900 732 aaKnown RBP15.17■□□□□ 0.02
PREX2-201ENST00000288368 ANP32BQ92688 251 aaKnown RBP15.15■□□□□ 0.02
PREX2-201ENST00000288368 ZNF777Q9ULD5 760 aaPredicted RBP15.13■□□□□ 0.01
PREX2-201ENST00000288368 ESF1Q9H501 851 aaKnown RBP15.12■□□□□ 0.01
PREX2-201ENST00000288368 PLPPR3Q6T4P5 718 aa15.11■□□□□ 0.01
PREX2-201ENST00000288368 P3H3Q8IVL6 736 aa15.1■□□□□ 0.01
PREX2-201ENST00000288368 STAG3Q9UJ98 1225 aa15.05■□□□□ 0
PREX2-201ENST00000288368 CCDC180Q9P1Z9 1646 aa15.04■□□□□ -0
PREX2-201ENST00000288368 UPF2Q9HAU5 1272 aaKnown RBP15.03■□□□□ -0
PREX2-201ENST00000288368 TONSLQ96HA7 1378 aa15.01□□□□□ -0.01
PREX2-201ENST00000288368 EIF5BO60841 1220 aaKnown RBP14.98□□□□□ -0.01
PREX2-201ENST00000288368 CHGAP10645 457 aaKnown RBP14.96□□□□□ -0.01
PREX2-201ENST00000288368 ARXQ96QS3 562 aa14.92□□□□□ -0.02
PREX2-201ENST00000288368 SCAF1Q9H7N4 1312 aaKnown RBP14.9□□□□□ -0.02
PREX2-201ENST00000288368 ACIN1Q9UKV3 1341 aaKnown RBP14.9□□□□□ -0.02
PREX2-201ENST00000288368 FKBP8Q14318 412 aa14.89□□□□□ -0.03
PREX2-201ENST00000288368 A0A0G2JS52 829 aa14.88□□□□□ -0.03
PREX2-201ENST00000288368 NBR1Q14596 966 aa14.87□□□□□ -0.03
PREX2-201ENST00000288368 FAM9BQ8IZU0 186 aa14.87□□□□□ -0.03
PREX2-201ENST00000288368 HNRNPUQ00839 825 aaKnown RBP eCLIP14.86□□□□□ -0.03
PREX2-201ENST00000288368 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.84□□□□□ -0.03
PREX2-201ENST00000288368 MYH16Q9H6N6 1097 aa14.84□□□□□ -0.03
PREX2-201ENST00000288368 SALL2Q9Y467 1007 aaPredicted RBP14.84□□□□□ -0.03
PREX2-201ENST00000288368 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.83□□□□□ -0.04
PREX2-201ENST00000288368 GLIPR1L2Q4G1C9 344 aa14.83□□□□□ -0.04
PREX2-201ENST00000288368 CDK11BP21127 795 aaKnown RBP14.82□□□□□ -0.04
PREX2-201ENST00000288368 WDR43Q15061 677 aaKnown RBP eCLIP14.8□□□□□ -0.04
PREX2-201ENST00000288368 CCDC136Q96JN2 1154 aa14.79□□□□□ -0.04
PREX2-201ENST00000288368 ZBTB7CA1YPR0 619 aa14.76□□□□□ -0.05
PREX2-201ENST00000288368 SENP3Q9H4L4 574 aaPredicted RBP14.76□□□□□ -0.05
PREX2-201ENST00000288368 NPM1P06748 294 aaKnown RBP eCLIP14.76□□□□□ -0.05
PREX2-201ENST00000288368 TMC1Q8TDI8 760 aa14.75□□□□□ -0.05
PREX2-201ENST00000288368 DCAF1Q9Y4B6 1507 aa14.75□□□□□ -0.05
PREX2-201ENST00000288368 PLEKHG5O94827 1062 aa14.74□□□□□ -0.05
PREX2-201ENST00000288368 DDX10Q13206 875 aaKnown RBP14.74□□□□□ -0.05
PREX2-201ENST00000288368 CSRNP3Q8WYN3 585 aa14.74□□□□□ -0.05
PREX2-201ENST00000288368 CHIC2Q9UKJ5 165 aa14.73□□□□□ -0.05
PREX2-201ENST00000288368 C14orf37Q86TY3 774 aa14.73□□□□□ -0.05
PREX2-201ENST00000288368 KDM2AQ9Y2K7 1162 aa14.71□□□□□ -0.05
PREX2-201ENST00000288368 MRS2Q9HD23 443 aa14.67□□□□□ -0.06
PREX2-201ENST00000288368 MTUS2Q5JR59 1369 aa14.66□□□□□ -0.06
PREX2-201ENST00000288368 RB1CC1Q8TDY2 1594 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms