RNA–Protein interactions for RNA: ENST00000597297.1

PDE4C-210, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best) BASIC

Gene PDE4C, Length 1,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-210ENST00000597297 NISCHQ9Y2I1 1504 aa27.15■■□□□ 1.94
PDE4C-210ENST00000597297 CCDC180Q9P1Z9 1646 aa24.02■■□□□ 1.44
PDE4C-210ENST00000597297 ABCC9O60706 1549 aa23.59■■□□□ 1.37
PDE4C-210ENST00000597297 DCAF8L2P0C7V8 631 aa22.81■■□□□ 1.24
PDE4C-210ENST00000597297 RB1CC1Q8TDY2 1594 aa22.63■■□□□ 1.21
PDE4C-210ENST00000597297 NACADO15069 1562 aa22.62■■□□□ 1.21
PDE4C-210ENST00000597297 ZCCHC6Q5VYS8 1495 aaKnown RBP22.59■■□□□ 1.21
PDE4C-210ENST00000597297 MYO15BQ96JP2 1530 aa22.47■■□□□ 1.19
PDE4C-210ENST00000597297 DCAF1Q9Y4B6 1507 aa22.4■■□□□ 1.18
PDE4C-210ENST00000597297 UNC13AQ9UPW8 1703 aa22.16■■□□□ 1.14
PDE4C-210ENST00000597297 PABPN1Q86U42 306 aaKnown RBP eCLIP22.13■■□□□ 1.13
PDE4C-210ENST00000597297 BICRAQ9NZM4 1560 aa22■■□□□ 1.11
PDE4C-210ENST00000597297 SCRIBQ14160 1630 aa22■■□□□ 1.11
PDE4C-210ENST00000597297 DNAJC5BQ9UF47 199 aa21.74■■□□□ 1.07
PDE4C-210ENST00000597297 SHROOM4Q9ULL8 1493 aa21.64■■□□□ 1.05
PDE4C-210ENST00000597297 EIF4G1Q04637 1599 aaKnown RBP21.38■■□□□ 1.01
PDE4C-210ENST00000597297 CC2D2AQ9P2K1 1620 aa21.31■■□□□ 1
PDE4C-210ENST00000597297 CECR2Q9BXF3 1484 aa21.21■□□□□ 0.99
PDE4C-210ENST00000597297 SMARCA4P51532 1647 aa21.02■□□□□ 0.96
PDE4C-210ENST00000597297 BAZ1AQ9NRL2 1556 aaPredicted RBP21■□□□□ 0.95
PDE4C-210ENST00000597297 MROH2BQ7Z745 1585 aa20.95■□□□□ 0.94
PDE4C-210ENST00000597297 ATAD2BQ9ULI0 1458 aa20.94■□□□□ 0.94
PDE4C-210ENST00000597297 NCAPD3P42695 1498 aa20.92■□□□□ 0.94
PDE4C-210ENST00000597297 SMARCA2P51531 1590 aa20.86■□□□□ 0.93
PDE4C-210ENST00000597297 SUPT5HO00267 1087 aaKnown RBP20.85■□□□□ 0.93
PDE4C-210ENST00000597297 PEG3Q9GZU2 1588 aa20.8■□□□□ 0.92
PDE4C-210ENST00000597297 HMGXB3Q12766 1538 aa20.74■□□□□ 0.91
PDE4C-210ENST00000597297 BAZ1BQ9UIG0 1483 aaKnown RBP20.74■□□□□ 0.91
PDE4C-210ENST00000597297 RSF1Q96T23 1441 aaPredicted RBP20.74■□□□□ 0.91
PDE4C-210ENST00000597297 WIZO95785 1651 aa20.73■□□□□ 0.91
PDE4C-210ENST00000597297 NESP48681 1621 aa20.45■□□□□ 0.86
PDE4C-210ENST00000597297 TOP2AP11388 1531 aaKnown RBP20.44■□□□□ 0.86
PDE4C-210ENST00000597297 CADPSQ9ULU8 1353 aa20.33■□□□□ 0.84
PDE4C-210ENST00000597297 LAMC3Q9Y6N6 1575 aa20.31■□□□□ 0.84
PDE4C-210ENST00000597297 CCDC88BA6NC98 1476 aa20.29■□□□□ 0.84
PDE4C-210ENST00000597297 ERCC6Q03468 1493 aa20.28■□□□□ 0.84
PDE4C-210ENST00000597297 PDS5BQ9NTI5 1447 aa20.2■□□□□ 0.82
PDE4C-210ENST00000597297 CFTRP13569 1480 aa20.2■□□□□ 0.82
PDE4C-210ENST00000597297 KIF21AQ7Z4S6 1674 aa20.14■□□□□ 0.82
PDE4C-210ENST00000597297 FANCD2Q9BXW9 1451 aa20.07■□□□□ 0.8
PDE4C-210ENST00000597297 THOC2Q8NI27 1593 aaKnown RBP20.03■□□□□ 0.8
PDE4C-210ENST00000597297 CHIC1Q5VXU3 224 aa20.02■□□□□ 0.8
PDE4C-210ENST00000597297 CUX2O14529 1486 aa20.01■□□□□ 0.79
PDE4C-210ENST00000597297 CEP164Q9UPV0 1460 aa20.01■□□□□ 0.79
PDE4C-210ENST00000597297 MRC2Q9UBG0 1479 aa19.97■□□□□ 0.79
PDE4C-210ENST00000597297 PRDM2Q13029 1718 aa19.97■□□□□ 0.79
PDE4C-210ENST00000597297 WDR62O43379 1518 aa19.89■□□□□ 0.77
PDE4C-210ENST00000597297 URB2Q14146 1524 aaKnown RBP19.88■□□□□ 0.77
PDE4C-210ENST00000597297 TOPBP1Q92547 1522 aa19.76■□□□□ 0.75
PDE4C-210ENST00000597297 ABCC8Q09428 1581 aa19.73■□□□□ 0.75
PDE4C-210ENST00000597297 DNMBPQ6XZF7 1577 aa19.69■□□□□ 0.74
PDE4C-210ENST00000597297 CUX1P39880 1505 aa19.63■□□□□ 0.73
PDE4C-210ENST00000597297 TRIM41Q8WV44 630 aa19.6■□□□□ 0.73
PDE4C-210ENST00000597297 POLA1P09884 1462 aaPredicted RBP19.59■□□□□ 0.73
PDE4C-210ENST00000597297 IFT140Q96RY7 1462 aa19.59■□□□□ 0.73
PDE4C-210ENST00000597297 ZNF608Q9ULD9 1512 aaPredicted RBP19.57■□□□□ 0.72
PDE4C-210ENST00000597297 RAD54L2Q9Y4B4 1467 aa19.56■□□□□ 0.72
PDE4C-210ENST00000597297 SOGA1O94964 1423 aa19.56■□□□□ 0.72
PDE4C-210ENST00000597297 FGD5Q6ZNL6 1462 aa19.55■□□□□ 0.72
PDE4C-210ENST00000597297 TARBP1Q13395 1621 aaKnown RBP19.53■□□□□ 0.72
PDE4C-210ENST00000597297 WRNQ14191 1432 aaPredicted RBP eCLIP19.52■□□□□ 0.72
PDE4C-210ENST00000597297 DNAJC5Q9H3Z4 198 aa19.49■□□□□ 0.71
PDE4C-210ENST00000597297 AQRO60306 1485 aaKnown RBP eCLIP19.48■□□□□ 0.713e-6■■■■□ 24.7
PDE4C-210ENST00000597297 TDRD9Q8NDG6 1382 aaKnown RBP19.46■□□□□ 0.71
PDE4C-210ENST00000597297 SYNJ1O43426 1573 aa19.46■□□□□ 0.71
PDE4C-210ENST00000597297 TOP2BQ02880 1626 aa19.44■□□□□ 0.7
PDE4C-210ENST00000597297 BIVM-ERCC5R4GMW8 1640 aa19.42■□□□□ 0.7
PDE4C-210ENST00000597297 EIF4G3O43432 1585 aaKnown RBP19.41■□□□□ 0.7
PDE4C-210ENST00000597297 ABCA10Q8WWZ4 1543 aa19.35■□□□□ 0.69
PDE4C-210ENST00000597297 WDR97A6NE52 1622 aa19.33■□□□□ 0.69
PDE4C-210ENST00000597297 OSCARQ8IYS5 282 aa19.32■□□□□ 0.68
PDE4C-210ENST00000597297 GAPVD1Q14C86 1478 aa19.29■□□□□ 0.68
PDE4C-210ENST00000597297 FBLN2P98095 1184 aa19.27■□□□□ 0.68
PDE4C-210ENST00000597297 GRIN2BQ13224 1484 aa19.26■□□□□ 0.67
PDE4C-210ENST00000597297 FAM9AQ8IZU1 332 aaPredicted RBP19.24■□□□□ 0.67
PDE4C-210ENST00000597297 ABCA5Q8WWZ7 1642 aa19.24■□□□□ 0.67
PDE4C-210ENST00000597297 SNAPC4Q5SXM2 1469 aa19.24■□□□□ 0.67
PDE4C-210ENST00000597297 LOC105371045A0A1W2PR82 267 aa19.23■□□□□ 0.67
PDE4C-210ENST00000597297 CHMP7Q8WUX9 453 aaPredicted RBP19.2■□□□□ 0.66
PDE4C-210ENST00000597297 PBRM1Q86U86 1689 aa19.2■□□□□ 0.66
PDE4C-210ENST00000597297 MAGI1Q96QZ7 1491 aaPredicted RBP19.18■□□□□ 0.66
PDE4C-210ENST00000597297 CHD1O14646 1710 aa19.18■□□□□ 0.66
PDE4C-210ENST00000597297 EEA1Q15075 1411 aa19.15■□□□□ 0.66
PDE4C-210ENST00000597297 SYNJ2O15056 1496 aa19.13■□□□□ 0.65
PDE4C-210ENST00000597297 KIF27Q86VH2 1401 aa19.1■□□□□ 0.65
PDE4C-210ENST00000597297 ERICH3Q5RHP9 1530 aa19.1■□□□□ 0.65
PDE4C-210ENST00000597297 IGF1RP08069 1367 aa19.1■□□□□ 0.65
PDE4C-210ENST00000597297 RUSC2Q8N2Y8 1516 aa19.08■□□□□ 0.64
PDE4C-210ENST00000597297 FHAD1B1AJZ9 1412 aa19.06■□□□□ 0.64
PDE4C-210ENST00000597297 ADAMTS12P58397 1594 aa19.04■□□□□ 0.64
PDE4C-210ENST00000597297 GRIN2AQ12879 1464 aa19.01■□□□□ 0.63
PDE4C-210ENST00000597297 CSRNP3Q8WYN3 585 aa18.99■□□□□ 0.63
PDE4C-210ENST00000597297 EHMT2Q96KQ7 1210 aa18.96■□□□□ 0.63
PDE4C-210ENST00000597297 CLASP1Q7Z460 1538 aa18.96■□□□□ 0.63
PDE4C-210ENST00000597297 CARMIL1Q5VZK9 1371 aa18.95■□□□□ 0.62
PDE4C-210ENST00000597297 KIF21BO75037 1637 aa18.93■□□□□ 0.62
PDE4C-210ENST00000597297 NUP160Q12769 1436 aa18.93■□□□□ 0.62
PDE4C-210ENST00000597297 CEP170Q5SW79 1584 aa18.93■□□□□ 0.62
PDE4C-210ENST00000597297 ARHGEF11O15085 1522 aa18.92■□□□□ 0.62
PDE4C-210ENST00000597297 RIMBP3CA6NJZ7 1639 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms