RNA–Protein interactions for RNA: ENST00000473997.5

CDK5RAP1-210, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 2 BASIC

Gene CDK5RAP1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-210ENST00000473997 NISCHQ9Y2I1 1504 aa26.45■■□□□ 1.82
CDK5RAP1-210ENST00000473997 CCDC180Q9P1Z9 1646 aa23.04■■□□□ 1.28
CDK5RAP1-210ENST00000473997 ZCCHC6Q5VYS8 1495 aaKnown RBP22.17■■□□□ 1.14
CDK5RAP1-210ENST00000473997 DCAF8L2P0C7V8 631 aa22.08■■□□□ 1.13
CDK5RAP1-210ENST00000473997 ABCC9O60706 1549 aa22■■□□□ 1.11
CDK5RAP1-210ENST00000473997 DCAF1Q9Y4B6 1507 aa21.82■■□□□ 1.08
CDK5RAP1-210ENST00000473997 SHROOM4Q9ULL8 1493 aa21.62■■□□□ 1.05
CDK5RAP1-210ENST00000473997 MYO15BQ96JP2 1530 aa21.59■■□□□ 1.05
CDK5RAP1-210ENST00000473997 NACADO15069 1562 aa21.54■■□□□ 1.04
CDK5RAP1-210ENST00000473997 RB1CC1Q8TDY2 1594 aa21.39■■□□□ 1.01
CDK5RAP1-210ENST00000473997 SCRIBQ14160 1630 aa21.25■□□□□ 0.99
CDK5RAP1-210ENST00000473997 UNC13AQ9UPW8 1703 aa20.9■□□□□ 0.94
CDK5RAP1-210ENST00000473997 SUPT5HO00267 1087 aaKnown RBP20.8■□□□□ 0.92
CDK5RAP1-210ENST00000473997 PABPN1Q86U42 306 aaKnown RBP eCLIP20.79■□□□□ 0.924e-8■■■■■ 30
CDK5RAP1-210ENST00000473997 BICRAQ9NZM4 1560 aa20.71■□□□□ 0.91
CDK5RAP1-210ENST00000473997 CECR2Q9BXF3 1484 aa20.58■□□□□ 0.89
CDK5RAP1-210ENST00000473997 RSF1Q96T23 1441 aaPredicted RBP20.5■□□□□ 0.87
CDK5RAP1-210ENST00000473997 MROH2BQ7Z745 1585 aa20.44■□□□□ 0.86
CDK5RAP1-210ENST00000473997 BAZ1AQ9NRL2 1556 aaPredicted RBP20.42■□□□□ 0.86
CDK5RAP1-210ENST00000473997 SMARCA4P51532 1647 aa20.33■□□□□ 0.85
CDK5RAP1-210ENST00000473997 WIZO95785 1651 aa20.27■□□□□ 0.84
CDK5RAP1-210ENST00000473997 EIF4G1Q04637 1599 aaKnown RBP20.12■□□□□ 0.81
CDK5RAP1-210ENST00000473997 ATAD2BQ9ULI0 1458 aa20.06■□□□□ 0.8
CDK5RAP1-210ENST00000473997 PEG3Q9GZU2 1588 aa20.05■□□□□ 0.8
CDK5RAP1-210ENST00000473997 SMARCA2P51531 1590 aa20.03■□□□□ 0.8
CDK5RAP1-210ENST00000473997 TOP2AP11388 1531 aaKnown RBP20.03■□□□□ 0.8
CDK5RAP1-210ENST00000473997 BAZ1BQ9UIG0 1483 aaKnown RBP19.95■□□□□ 0.78
CDK5RAP1-210ENST00000473997 NCAPD3P42695 1498 aa19.89■□□□□ 0.77
CDK5RAP1-210ENST00000473997 CCDC88BA6NC98 1476 aa19.87■□□□□ 0.77
CDK5RAP1-210ENST00000473997 CC2D2AQ9P2K1 1620 aa19.86■□□□□ 0.77
CDK5RAP1-210ENST00000473997 HMGXB3Q12766 1538 aa19.81■□□□□ 0.76
CDK5RAP1-210ENST00000473997 CHIC1Q5VXU3 224 aa19.79■□□□□ 0.76
CDK5RAP1-210ENST00000473997 TRIM41Q8WV44 630 aa19.55■□□□□ 0.72
CDK5RAP1-210ENST00000473997 DNAJC5BQ9UF47 199 aa19.53■□□□□ 0.72
CDK5RAP1-210ENST00000473997 CFTRP13569 1480 aa19.43■□□□□ 0.7
CDK5RAP1-210ENST00000473997 ABCC8Q09428 1581 aa19.42■□□□□ 0.7
CDK5RAP1-210ENST00000473997 CADPSQ9ULU8 1353 aa19.41■□□□□ 0.7
CDK5RAP1-210ENST00000473997 WRNQ14191 1432 aaPredicted RBP eCLIP19.31■□□□□ 0.68
CDK5RAP1-210ENST00000473997 NESP48681 1621 aa19.26■□□□□ 0.67
CDK5RAP1-210ENST00000473997 PRDM2Q13029 1718 aa19.25■□□□□ 0.67
CDK5RAP1-210ENST00000473997 LAMC3Q9Y6N6 1575 aa19.22■□□□□ 0.67
CDK5RAP1-210ENST00000473997 FAM9AQ8IZU1 332 aaPredicted RBP19.21■□□□□ 0.67
CDK5RAP1-210ENST00000473997 SYNJ1O43426 1573 aa19.2■□□□□ 0.66
CDK5RAP1-210ENST00000473997 FANCD2Q9BXW9 1451 aa19.19■□□□□ 0.66
CDK5RAP1-210ENST00000473997 PDS5BQ9NTI5 1447 aa19.13■□□□□ 0.65
CDK5RAP1-210ENST00000473997 TOP2BQ02880 1626 aa19.12■□□□□ 0.65
CDK5RAP1-210ENST00000473997 CUX1P39880 1505 aa19.11■□□□□ 0.65
CDK5RAP1-210ENST00000473997 LOC105371045A0A1W2PR82 267 aa19.09■□□□□ 0.65
CDK5RAP1-210ENST00000473997 BIVM-ERCC5R4GMW8 1640 aa19.08■□□□□ 0.64
CDK5RAP1-210ENST00000473997 CEP164Q9UPV0 1460 aa19.07■□□□□ 0.64
CDK5RAP1-210ENST00000473997 SOGA1O94964 1423 aa19.06■□□□□ 0.64
CDK5RAP1-210ENST00000473997 EHMT2Q96KQ7 1210 aa18.99■□□□□ 0.63
CDK5RAP1-210ENST00000473997 KIF21AQ7Z4S6 1674 aa18.99■□□□□ 0.63
CDK5RAP1-210ENST00000473997 RUSC2Q8N2Y8 1516 aa18.98■□□□□ 0.63
CDK5RAP1-210ENST00000473997 EEA1Q15075 1411 aa18.96■□□□□ 0.63
CDK5RAP1-210ENST00000473997 DNMBPQ6XZF7 1577 aa18.96■□□□□ 0.63
CDK5RAP1-210ENST00000473997 CSRNP3Q8WYN3 585 aa18.96■□□□□ 0.63
CDK5RAP1-210ENST00000473997 TOPBP1Q92547 1522 aa18.96■□□□□ 0.62
CDK5RAP1-210ENST00000473997 FGD5Q6ZNL6 1462 aa18.93■□□□□ 0.62
CDK5RAP1-210ENST00000473997 URB2Q14146 1524 aaKnown RBP18.93■□□□□ 0.62
CDK5RAP1-210ENST00000473997 ERCC6Q03468 1493 aa18.89■□□□□ 0.62
CDK5RAP1-210ENST00000473997 MRC2Q9UBG0 1479 aa18.85■□□□□ 0.61
CDK5RAP1-210ENST00000473997 KIF27Q86VH2 1401 aa18.85■□□□□ 0.61
CDK5RAP1-210ENST00000473997 POLA1P09884 1462 aaPredicted RBP18.85■□□□□ 0.61
CDK5RAP1-210ENST00000473997 CUX2O14529 1486 aa18.82■□□□□ 0.6
CDK5RAP1-210ENST00000473997 RAD54L2Q9Y4B4 1467 aa18.82■□□□□ 0.6
CDK5RAP1-210ENST00000473997 UBTFP17480 764 aaKnown RBP18.75■□□□□ 0.59
CDK5RAP1-210ENST00000473997 ABCA10Q8WWZ4 1543 aa18.74■□□□□ 0.59
CDK5RAP1-210ENST00000473997 WDR62O43379 1518 aa18.72■□□□□ 0.59
CDK5RAP1-210ENST00000473997 GOLGA3Q08378 1498 aa18.71■□□□□ 0.59
CDK5RAP1-210ENST00000473997 IGF1RP08069 1367 aa18.7■□□□□ 0.58
CDK5RAP1-210ENST00000473997 KIF21BO75037 1637 aa18.69■□□□□ 0.58
CDK5RAP1-210ENST00000473997 TDRD9Q8NDG6 1382 aaKnown RBP18.68■□□□□ 0.58
CDK5RAP1-210ENST00000473997 THOC2Q8NI27 1593 aaKnown RBP18.67■□□□□ 0.58
CDK5RAP1-210ENST00000473997 PRXQ9BXM0 1461 aa18.65■□□□□ 0.58
CDK5RAP1-210ENST00000473997 RAPGEF2Q9Y4G8 1499 aa18.65■□□□□ 0.58
CDK5RAP1-210ENST00000473997 TNIKQ9UKE5 1360 aa18.65■□□□□ 0.58
CDK5RAP1-210ENST00000473997 TARBP1Q13395 1621 aaKnown RBP18.64■□□□□ 0.57
CDK5RAP1-210ENST00000473997 WDR97A6NE52 1622 aa18.63■□□□□ 0.57
CDK5RAP1-210ENST00000473997 IFT140Q96RY7 1462 aa18.62■□□□□ 0.57
CDK5RAP1-210ENST00000473997 CARMIL1Q5VZK9 1371 aa18.62■□□□□ 0.57
CDK5RAP1-210ENST00000473997 GAPVD1Q14C86 1478 aa18.61■□□□□ 0.57
CDK5RAP1-210ENST00000473997 ERICH3Q5RHP9 1530 aa18.59■□□□□ 0.57
CDK5RAP1-210ENST00000473997 ABCA5Q8WWZ7 1642 aa18.57■□□□□ 0.56
CDK5RAP1-210ENST00000473997 AQRO60306 1485 aaKnown RBP eCLIP18.56■□□□□ 0.564e-7■■■■□ 22.9
CDK5RAP1-210ENST00000473997 CEP162Q5TB80 1403 aa18.54■□□□□ 0.56
CDK5RAP1-210ENST00000473997 ZNF608Q9ULD9 1512 aaPredicted RBP18.53■□□□□ 0.56
CDK5RAP1-210ENST00000473997 RANGAP1P46060 587 aaPredicted RBP18.52■□□□□ 0.56
CDK5RAP1-210ENST00000473997 CUL7Q14999 1698 aa18.49■□□□□ 0.55
CDK5RAP1-210ENST00000473997 GRIN2BQ13224 1484 aa18.46■□□□□ 0.55
CDK5RAP1-210ENST00000473997 PBRM1Q86U86 1689 aa18.45■□□□□ 0.54
CDK5RAP1-210ENST00000473997 CLIP1P30622 1438 aa18.43■□□□□ 0.54
CDK5RAP1-210ENST00000473997 EIF4G3O43432 1585 aaKnown RBP18.42■□□□□ 0.54
CDK5RAP1-210ENST00000473997 FHAD1B1AJZ9 1412 aa18.39■□□□□ 0.54
CDK5RAP1-210ENST00000473997 SNAPC4Q5SXM2 1469 aa18.36■□□□□ 0.53
CDK5RAP1-210ENST00000473997 ADAMTS12P58397 1594 aa18.34■□□□□ 0.53
CDK5RAP1-210ENST00000473997 FBLN2P98095 1184 aa18.31■□□□□ 0.52
CDK5RAP1-210ENST00000473997 CHMP7Q8WUX9 453 aaPredicted RBP18.31■□□□□ 0.52
CDK5RAP1-210ENST00000473997 MAGI1Q96QZ7 1491 aaPredicted RBP18.3■□□□□ 0.52
CDK5RAP1-210ENST00000473997 CTTNBP2Q8WZ74 1663 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms