RNA–Protein interactions for RNA: ENST00000302823.7

CTLA4-202, Transcript of cytotoxic T-lymphocyte associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTLA4, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4-202ENST00000302823 NISCHQ9Y2I1 1504 aa26.45■■□□□ 1.83
CTLA4-202ENST00000302823 CCDC180Q9P1Z9 1646 aa23.32■■□□□ 1.32
CTLA4-202ENST00000302823 ABCC9O60706 1549 aa22.7■■□□□ 1.22
CTLA4-202ENST00000302823 ZCCHC6Q5VYS8 1495 aaKnown RBP22.1■■□□□ 1.13
CTLA4-202ENST00000302823 AEBP2Q6ZN18 517 aaPredicted RBP22.07■■□□□ 1.12
CTLA4-202ENST00000302823 DCAF8L2P0C7V8 631 aa22.05■■□□□ 1.12
CTLA4-202ENST00000302823 NACADO15069 1562 aa21.88■■□□□ 1.09
CTLA4-202ENST00000302823 DCAF1Q9Y4B6 1507 aa21.84■■□□□ 1.09
CTLA4-202ENST00000302823 RB1CC1Q8TDY2 1594 aa21.84■■□□□ 1.09
CTLA4-202ENST00000302823 MYO15BQ96JP2 1530 aa21.82■■□□□ 1.08
CTLA4-202ENST00000302823 SHROOM4Q9ULL8 1493 aa21.45■■□□□ 1.02
CTLA4-202ENST00000302823 SCRIBQ14160 1630 aa21.4■■□□□ 1.02
CTLA4-202ENST00000302823 UNC13AQ9UPW8 1703 aa21.38■■□□□ 1.01
CTLA4-202ENST00000302823 PABPN1Q86U42 306 aaKnown RBP eCLIP21.29■■□□□ 1
CTLA4-202ENST00000302823 BICRAQ9NZM4 1560 aa21.25■□□□□ 0.99
CTLA4-202ENST00000302823 SUPT5HO00267 1087 aaKnown RBP21.09■□□□□ 0.97
CTLA4-202ENST00000302823 CHIC1Q5VXU3 224 aa20.68■□□□□ 0.9
CTLA4-202ENST00000302823 DNAJC5BQ9UF47 199 aa20.66■□□□□ 0.9
CTLA4-202ENST00000302823 CECR2Q9BXF3 1484 aa20.65■□□□□ 0.9
CTLA4-202ENST00000302823 EIF4G1Q04637 1599 aaKnown RBP20.64■□□□□ 0.9
CTLA4-202ENST00000302823 CC2D2AQ9P2K1 1620 aa20.5■□□□□ 0.87
CTLA4-202ENST00000302823 SMARCA4P51532 1647 aa20.46■□□□□ 0.87
CTLA4-202ENST00000302823 BAZ1AQ9NRL2 1556 aaPredicted RBP20.45■□□□□ 0.86
CTLA4-202ENST00000302823 MROH2BQ7Z745 1585 aa20.44■□□□□ 0.86
CTLA4-202ENST00000302823 HRCP23327 699 aa20.37■□□□□ 0.85
CTLA4-202ENST00000302823 ATAD2BQ9ULI0 1458 aa20.31■□□□□ 0.84
CTLA4-202ENST00000302823 RSF1Q96T23 1441 aaPredicted RBP20.29■□□□□ 0.84
CTLA4-202ENST00000302823 PEG3Q9GZU2 1588 aa20.24■□□□□ 0.83
CTLA4-202ENST00000302823 NCAPD3P42695 1498 aa20.23■□□□□ 0.83
CTLA4-202ENST00000302823 SMARCA2P51531 1590 aa20.22■□□□□ 0.83
CTLA4-202ENST00000302823 WIZO95785 1651 aa20.22■□□□□ 0.83
CTLA4-202ENST00000302823 PCGF6Q9BYE7 350 aa20.14■□□□□ 0.81
CTLA4-202ENST00000302823 BAZ1BQ9UIG0 1483 aaKnown RBP20.13■□□□□ 0.81
CTLA4-202ENST00000302823 HMGXB3Q12766 1538 aa20.13■□□□□ 0.81
CTLA4-202ENST00000302823 LOC105371045A0A1W2PR82 267 aa19.98■□□□□ 0.79
CTLA4-202ENST00000302823 TOP2AP11388 1531 aaKnown RBP19.98■□□□□ 0.79
CTLA4-202ENST00000302823 TRIM26Q12899 539 aaPredicted RBP19.83■□□□□ 0.76
CTLA4-202ENST00000302823 PPARGC1BQ86YN6 1023 aaKnown RBP19.8■□□□□ 0.76
CTLA4-202ENST00000302823 CCDC88BA6NC98 1476 aa19.78■□□□□ 0.76
CTLA4-202ENST00000302823 NESP48681 1621 aa19.74■□□□□ 0.75
CTLA4-202ENST00000302823 TRIM41Q8WV44 630 aa19.7■□□□□ 0.74
CTLA4-202ENST00000302823 CADPSQ9ULU8 1353 aa19.66■□□□□ 0.74
CTLA4-202ENST00000302823 LAMC3Q9Y6N6 1575 aa19.61■□□□□ 0.73
CTLA4-202ENST00000302823 CFTRP13569 1480 aa19.6■□□□□ 0.73
CTLA4-202ENST00000302823 ZEB1P37275 1124 aaPredicted RBP19.53■□□□□ 0.72
CTLA4-202ENST00000302823 PDS5BQ9NTI5 1447 aa19.48■□□□□ 0.71
CTLA4-202ENST00000302823 ERCC6Q03468 1493 aa19.48■□□□□ 0.71
CTLA4-202ENST00000302823 FAM9AQ8IZU1 332 aaPredicted RBP19.45■□□□□ 0.7
CTLA4-202ENST00000302823 KIF21AQ7Z4S6 1674 aa19.44■□□□□ 0.7
CTLA4-202ENST00000302823 FANCD2Q9BXW9 1451 aa19.44■□□□□ 0.7
CTLA4-202ENST00000302823 PRDM2Q13029 1718 aa19.38■□□□□ 0.69
CTLA4-202ENST00000302823 CEP164Q9UPV0 1460 aa19.37■□□□□ 0.69
CTLA4-202ENST00000302823 THOC2Q8NI27 1593 aaKnown RBP19.32■□□□□ 0.68
CTLA4-202ENST00000302823 MRC2Q9UBG0 1479 aa19.29■□□□□ 0.68
CTLA4-202ENST00000302823 URB2Q14146 1524 aaKnown RBP19.26■□□□□ 0.67
CTLA4-202ENST00000302823 WDR62O43379 1518 aa19.22■□□□□ 0.67
CTLA4-202ENST00000302823 EHMT2Q96KQ7 1210 aa19.2■□□□□ 0.66
CTLA4-202ENST00000302823 ABCC8Q09428 1581 aa19.17■□□□□ 0.66
CTLA4-202ENST00000302823 TOPBP1Q92547 1522 aa19.17■□□□□ 0.66
CTLA4-202ENST00000302823 CUX1P39880 1505 aa19.14■□□□□ 0.66
CTLA4-202ENST00000302823 CUX2O14529 1486 aa19.14■□□□□ 0.65
CTLA4-202ENST00000302823 DNMBPQ6XZF7 1577 aa19.13■□□□□ 0.65
CTLA4-202ENST00000302823 WRNQ14191 1432 aaPredicted RBP eCLIP19.1■□□□□ 0.65
CTLA4-202ENST00000302823 SYNJ1O43426 1573 aa19.06■□□□□ 0.64
CTLA4-202ENST00000302823 POLA1P09884 1462 aaPredicted RBP19.03■□□□□ 0.64
CTLA4-202ENST00000302823 FGD5Q6ZNL6 1462 aa19.03■□□□□ 0.64
CTLA4-202ENST00000302823 EEA1Q15075 1411 aa19.01■□□□□ 0.63
CTLA4-202ENST00000302823 TOP2BQ02880 1626 aa19■□□□□ 0.63
CTLA4-202ENST00000302823 BIVM-ERCC5R4GMW8 1640 aa18.98■□□□□ 0.63
CTLA4-202ENST00000302823 RAD54L2Q9Y4B4 1467 aa18.98■□□□□ 0.63
CTLA4-202ENST00000302823 CEP162Q5TB80 1403 aa18.98■□□□□ 0.63
CTLA4-202ENST00000302823 TNIKQ9UKE5 1360 aa18.96■□□□□ 0.63
CTLA4-202ENST00000302823 IFT140Q96RY7 1462 aa18.95■□□□□ 0.62
CTLA4-202ENST00000302823 SOGA1O94964 1423 aa18.94■□□□□ 0.62
CTLA4-202ENST00000302823 TARBP1Q13395 1621 aaKnown RBP18.93■□□□□ 0.62
CTLA4-202ENST00000302823 ZNF608Q9ULD9 1512 aaPredicted RBP18.92■□□□□ 0.62
CTLA4-202ENST00000302823 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.9■□□□□ 0.62
CTLA4-202ENST00000302823 CCER1Q8TC90 406 aaPredicted RBP18.9■□□□□ 0.62
CTLA4-202ENST00000302823 GOLGA3Q08378 1498 aa18.86■□□□□ 0.61
CTLA4-202ENST00000302823 TDRD9Q8NDG6 1382 aaKnown RBP18.85■□□□□ 0.61
CTLA4-202ENST00000302823 AQRO60306 1485 aaKnown RBP eCLIP18.84■□□□□ 0.61
CTLA4-202ENST00000302823 CSRNP3Q8WYN3 585 aa18.83■□□□□ 0.61
CTLA4-202ENST00000302823 SCAF1Q9H7N4 1312 aaKnown RBP18.83■□□□□ 0.6
CTLA4-202ENST00000302823 RUSC2Q8N2Y8 1516 aa18.83■□□□□ 0.6
CTLA4-202ENST00000302823 ABCA10Q8WWZ4 1543 aa18.83■□□□□ 0.6
CTLA4-202ENST00000302823 WDR97A6NE52 1622 aa18.82■□□□□ 0.6
CTLA4-202ENST00000302823 EIF4G3O43432 1585 aaKnown RBP18.8■□□□□ 0.6
CTLA4-202ENST00000302823 PELP1Q8IZL8 1130 aaKnown RBP18.78■□□□□ 0.6
CTLA4-202ENST00000302823 KIF21BO75037 1637 aa18.77■□□□□ 0.59
CTLA4-202ENST00000302823 SENP3Q9H4L4 574 aaPredicted RBP18.73■□□□□ 0.59
CTLA4-202ENST00000302823 ABCA5Q8WWZ7 1642 aa18.73■□□□□ 0.59
CTLA4-202ENST00000302823 GAPVD1Q14C86 1478 aa18.72■□□□□ 0.59
CTLA4-202ENST00000302823 UBTFP17480 764 aaKnown RBP18.71■□□□□ 0.59
CTLA4-202ENST00000302823 TTBK1Q5TCY1 1321 aaPredicted RBP18.67■□□□□ 0.58
CTLA4-202ENST00000302823 GRIN2BQ13224 1484 aa18.67■□□□□ 0.58
CTLA4-202ENST00000302823 ACIN1Q9UKV3 1341 aaKnown RBP18.65■□□□□ 0.58
CTLA4-202ENST00000302823 KIF27Q86VH2 1401 aa18.65■□□□□ 0.58
CTLA4-202ENST00000302823 DIEXFQ68CQ4 756 aaKnown RBP18.64■□□□□ 0.58
CTLA4-202ENST00000302823 SNAPC4Q5SXM2 1469 aa18.64■□□□□ 0.58
CTLA4-202ENST00000302823 PBRM1Q86U86 1689 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms