RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 NISCHQ9Y2I1 1504 aa26.5■■□□□ 1.83
CTCFL-209ENST00000433949 CCDC180Q9P1Z9 1646 aa23.11■■□□□ 1.29
CTCFL-209ENST00000433949 ABCC9O60706 1549 aa22.42■■□□□ 1.18
CTCFL-209ENST00000433949 DCAF8L2P0C7V8 631 aa22.34■■□□□ 1.17
CTCFL-209ENST00000433949 ZCCHC6Q5VYS8 1495 aaKnown RBP22.16■■□□□ 1.14
CTCFL-209ENST00000433949 DCAF1Q9Y4B6 1507 aa21.77■■□□□ 1.08
CTCFL-209ENST00000433949 SHROOM4Q9ULL8 1493 aa21.67■■□□□ 1.06
CTCFL-209ENST00000433949 NACADO15069 1562 aa21.67■■□□□ 1.06
CTCFL-209ENST00000433949 MYO15BQ96JP2 1530 aa21.62■■□□□ 1.05
CTCFL-209ENST00000433949 RB1CC1Q8TDY2 1594 aa21.59■■□□□ 1.05
CTCFL-209ENST00000433949 SCRIBQ14160 1630 aa21.42■■□□□ 1.02
CTCFL-209ENST00000433949 PABPN1Q86U42 306 aaKnown RBP eCLIP21.19■□□□□ 0.98
CTCFL-209ENST00000433949 UNC13AQ9UPW8 1703 aa21.12■□□□□ 0.97
CTCFL-209ENST00000433949 BICRAQ9NZM4 1560 aa20.96■□□□□ 0.95
CTCFL-209ENST00000433949 SUPT5HO00267 1087 aaKnown RBP20.8■□□□□ 0.92
CTCFL-209ENST00000433949 CECR2Q9BXF3 1484 aa20.72■□□□□ 0.91
CTCFL-209ENST00000433949 MROH2BQ7Z745 1585 aa20.52■□□□□ 0.88
CTCFL-209ENST00000433949 RSF1Q96T23 1441 aaPredicted RBP20.49■□□□□ 0.87
CTCFL-209ENST00000433949 BAZ1AQ9NRL2 1556 aaPredicted RBP20.46■□□□□ 0.87
CTCFL-209ENST00000433949 SMARCA4P51532 1647 aa20.42■□□□□ 0.86
CTCFL-209ENST00000433949 EIF4G1Q04637 1599 aaKnown RBP20.38■□□□□ 0.85
CTCFL-209ENST00000433949 WIZO95785 1651 aa20.33■□□□□ 0.84
CTCFL-209ENST00000433949 ATAD2BQ9ULI0 1458 aa20.2■□□□□ 0.82
CTCFL-209ENST00000433949 CC2D2AQ9P2K1 1620 aa20.18■□□□□ 0.82
CTCFL-209ENST00000433949 CHIC1Q5VXU3 224 aa20.15■□□□□ 0.82
CTCFL-209ENST00000433949 DNAJC5BQ9UF47 199 aa20.14■□□□□ 0.81
CTCFL-209ENST00000433949 SMARCA2P51531 1590 aa20.12■□□□□ 0.81
CTCFL-209ENST00000433949 PEG3Q9GZU2 1588 aa20.1■□□□□ 0.81
CTCFL-209ENST00000433949 BAZ1BQ9UIG0 1483 aaKnown RBP20.09■□□□□ 0.81
CTCFL-209ENST00000433949 NCAPD3P42695 1498 aa20.05■□□□□ 0.8
CTCFL-209ENST00000433949 TOP2AP11388 1531 aaKnown RBP20.03■□□□□ 0.8
CTCFL-209ENST00000433949 HMGXB3Q12766 1538 aa19.93■□□□□ 0.78
CTCFL-209ENST00000433949 CCDC88BA6NC98 1476 aa19.91■□□□□ 0.78
CTCFL-209ENST00000433949 NESP48681 1621 aa19.58■□□□□ 0.72
CTCFL-209ENST00000433949 CADPSQ9ULU8 1353 aa19.58■□□□□ 0.72
CTCFL-209ENST00000433949 TRIM41Q8WV44 630 aa19.56■□□□□ 0.72
CTCFL-209ENST00000433949 CFTRP13569 1480 aa19.53■□□□□ 0.72
CTCFL-209ENST00000433949 ABCC8Q09428 1581 aa19.43■□□□□ 0.7
CTCFL-209ENST00000433949 LAMC3Q9Y6N6 1575 aa19.38■□□□□ 0.69
CTCFL-209ENST00000433949 LOC105371045A0A1W2PR82 267 aa19.36■□□□□ 0.69
CTCFL-209ENST00000433949 FANCD2Q9BXW9 1451 aa19.36■□□□□ 0.69
CTCFL-209ENST00000433949 PDS5BQ9NTI5 1447 aa19.32■□□□□ 0.68
CTCFL-209ENST00000433949 WRNQ14191 1432 aaPredicted RBP eCLIP19.3■□□□□ 0.68
CTCFL-209ENST00000433949 PRDM2Q13029 1718 aa19.26■□□□□ 0.67
CTCFL-209ENST00000433949 CEP164Q9UPV0 1460 aa19.25■□□□□ 0.67
CTCFL-209ENST00000433949 ERCC6Q03468 1493 aa19.24■□□□□ 0.67
CTCFL-209ENST00000433949 KIF21AQ7Z4S6 1674 aa19.22■□□□□ 0.67
CTCFL-209ENST00000433949 SYNJ1O43426 1573 aa19.21■□□□□ 0.67
CTCFL-209ENST00000433949 CUX1P39880 1505 aa19.18■□□□□ 0.66
CTCFL-209ENST00000433949 FAM9AQ8IZU1 332 aaPredicted RBP19.17■□□□□ 0.66
CTCFL-209ENST00000433949 URB2Q14146 1524 aaKnown RBP19.13■□□□□ 0.65
CTCFL-209ENST00000433949 TOP2BQ02880 1626 aa19.1■□□□□ 0.65
CTCFL-209ENST00000433949 TOPBP1Q92547 1522 aa19.09■□□□□ 0.65
CTCFL-209ENST00000433949 MRC2Q9UBG0 1479 aa19.07■□□□□ 0.64
CTCFL-209ENST00000433949 EEA1Q15075 1411 aa19.06■□□□□ 0.64
CTCFL-209ENST00000433949 DNMBPQ6XZF7 1577 aa19.05■□□□□ 0.64
CTCFL-209ENST00000433949 FGD5Q6ZNL6 1462 aa19.05■□□□□ 0.64
CTCFL-209ENST00000433949 BIVM-ERCC5R4GMW8 1640 aa19.04■□□□□ 0.64
CTCFL-209ENST00000433949 EHMT2Q96KQ7 1210 aa19.03■□□□□ 0.64
CTCFL-209ENST00000433949 SOGA1O94964 1423 aa19.03■□□□□ 0.64
CTCFL-209ENST00000433949 PCGF6Q9BYE7 350 aa19■□□□□ 0.63
CTCFL-209ENST00000433949 RAD54L2Q9Y4B4 1467 aa19■□□□□ 0.63
CTCFL-209ENST00000433949 POLA1P09884 1462 aaPredicted RBP18.99■□□□□ 0.63
CTCFL-209ENST00000433949 RUSC2Q8N2Y8 1516 aa18.98■□□□□ 0.63
CTCFL-209ENST00000433949 THOC2Q8NI27 1593 aaKnown RBP18.95■□□□□ 0.62
CTCFL-209ENST00000433949 WDR62O43379 1518 aa18.94■□□□□ 0.62
CTCFL-209ENST00000433949 TRIM26Q12899 539 aaPredicted RBP18.93■□□□□ 0.62
CTCFL-209ENST00000433949 CUX2O14529 1486 aa18.9■□□□□ 0.62
CTCFL-209ENST00000433949 TDRD9Q8NDG6 1382 aaKnown RBP18.88■□□□□ 0.61
CTCFL-209ENST00000433949 CSRNP3Q8WYN3 585 aa18.85■□□□□ 0.61
CTCFL-209ENST00000433949 HRCP23327 699 aa18.84■□□□□ 0.61
CTCFL-209ENST00000433949 KIF27Q86VH2 1401 aa18.83■□□□□ 0.61
CTCFL-209ENST00000433949 TNIKQ9UKE5 1360 aa18.8■□□□□ 0.6
CTCFL-209ENST00000433949 ABCA10Q8WWZ4 1543 aa18.8■□□□□ 0.6
CTCFL-209ENST00000433949 AQRO60306 1485 aaKnown RBP eCLIP18.79■□□□□ 0.63e-6■■■□□ 17.6
CTCFL-209ENST00000433949 ZNF608Q9ULD9 1512 aaPredicted RBP18.79■□□□□ 0.6
CTCFL-209ENST00000433949 GOLGA3Q08378 1498 aa18.79■□□□□ 0.6
CTCFL-209ENST00000433949 TARBP1Q13395 1621 aaKnown RBP18.78■□□□□ 0.6
CTCFL-209ENST00000433949 IFT140Q96RY7 1462 aa18.78■□□□□ 0.6
CTCFL-209ENST00000433949 KIF21BO75037 1637 aa18.78■□□□□ 0.6
CTCFL-209ENST00000433949 IGF1RP08069 1367 aa18.73■□□□□ 0.59
CTCFL-209ENST00000433949 CEP162Q5TB80 1403 aa18.72■□□□□ 0.59
CTCFL-209ENST00000433949 GAPVD1Q14C86 1478 aa18.72■□□□□ 0.59
CTCFL-209ENST00000433949 WDR97A6NE52 1622 aa18.7■□□□□ 0.58
CTCFL-209ENST00000433949 UBTFP17480 764 aaKnown RBP18.68■□□□□ 0.58
CTCFL-209ENST00000433949 ABCA5Q8WWZ7 1642 aa18.65■□□□□ 0.58
CTCFL-209ENST00000433949 CARMIL1Q5VZK9 1371 aa18.64■□□□□ 0.57
CTCFL-209ENST00000433949 EIF4G3O43432 1585 aaKnown RBP18.63■□□□□ 0.57
CTCFL-209ENST00000433949 RAPGEF2Q9Y4G8 1499 aa18.62■□□□□ 0.57
CTCFL-209ENST00000433949 RANGAP1P46060 587 aaPredicted RBP18.62■□□□□ 0.57
CTCFL-209ENST00000433949 FBLN2P98095 1184 aa18.61■□□□□ 0.57
CTCFL-209ENST00000433949 GRIN2BQ13224 1484 aa18.59■□□□□ 0.57
CTCFL-209ENST00000433949 PRXQ9BXM0 1461 aa18.59■□□□□ 0.57
CTCFL-209ENST00000433949 ERICH3Q5RHP9 1530 aa18.57■□□□□ 0.56
CTCFL-209ENST00000433949 SNAPC4Q5SXM2 1469 aa18.55■□□□□ 0.56
CTCFL-209ENST00000433949 PBRM1Q86U86 1689 aa18.55■□□□□ 0.56
CTCFL-209ENST00000433949 CHMP7Q8WUX9 453 aaPredicted RBP18.52■□□□□ 0.56
CTCFL-209ENST00000433949 FHAD1B1AJZ9 1412 aa18.49■□□□□ 0.55
CTCFL-209ENST00000433949 CLIP1P30622 1438 aa18.49■□□□□ 0.55
CTCFL-209ENST00000433949 CUL7Q14999 1698 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms