RNA–Protein interactions for RNA: ENST00000409647.1

LONRF2-202, Transcript of LON peptidase N-terminal domain and ring finger 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LONRF2, Length 2,363 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF2-202ENST00000409647 NISCHQ9Y2I1 1504 aa26.54■■□□□ 1.84
LONRF2-202ENST00000409647 CCDC180Q9P1Z9 1646 aa23.12■■□□□ 1.29
LONRF2-202ENST00000409647 ZCCHC6Q5VYS8 1495 aaKnown RBP22.27■■□□□ 1.15
LONRF2-202ENST00000409647 DCAF8L2P0C7V8 631 aa22.21■■□□□ 1.15
LONRF2-202ENST00000409647 ABCC9O60706 1549 aa22.11■■□□□ 1.13
LONRF2-202ENST00000409647 SHROOM4Q9ULL8 1493 aa21.89■■□□□ 1.1
LONRF2-202ENST00000409647 DCAF1Q9Y4B6 1507 aa21.8■■□□□ 1.08
LONRF2-202ENST00000409647 NACADO15069 1562 aa21.53■■□□□ 1.04
LONRF2-202ENST00000409647 MYO15BQ96JP2 1530 aa21.52■■□□□ 1.04
LONRF2-202ENST00000409647 SCRIBQ14160 1630 aa21.45■■□□□ 1.02
LONRF2-202ENST00000409647 RB1CC1Q8TDY2 1594 aa21.41■■□□□ 1.02
LONRF2-202ENST00000409647 UNC13AQ9UPW8 1703 aa21.13■□□□□ 0.97
LONRF2-202ENST00000409647 SUPT5HO00267 1087 aaKnown RBP21.01■□□□□ 0.95
LONRF2-202ENST00000409647 PABPN1Q86U42 306 aaKnown RBP eCLIP20.89■□□□□ 0.94
LONRF2-202ENST00000409647 BICRAQ9NZM4 1560 aa20.82■□□□□ 0.92
LONRF2-202ENST00000409647 CECR2Q9BXF3 1484 aa20.73■□□□□ 0.91
LONRF2-202ENST00000409647 RSF1Q96T23 1441 aaPredicted RBP20.6■□□□□ 0.89
LONRF2-202ENST00000409647 MROH2BQ7Z745 1585 aa20.58■□□□□ 0.88
LONRF2-202ENST00000409647 BAZ1AQ9NRL2 1556 aaPredicted RBP20.48■□□□□ 0.87
LONRF2-202ENST00000409647 WIZO95785 1651 aa20.46■□□□□ 0.87
LONRF2-202ENST00000409647 SMARCA4P51532 1647 aa20.45■□□□□ 0.86
LONRF2-202ENST00000409647 EIF4G1Q04637 1599 aaKnown RBP20.19■□□□□ 0.82
LONRF2-202ENST00000409647 TOP2AP11388 1531 aaKnown RBP20.12■□□□□ 0.81
LONRF2-202ENST00000409647 ATAD2BQ9ULI0 1458 aa20.1■□□□□ 0.81
LONRF2-202ENST00000409647 PEG3Q9GZU2 1588 aa20.09■□□□□ 0.81
LONRF2-202ENST00000409647 SMARCA2P51531 1590 aa20.05■□□□□ 0.8
LONRF2-202ENST00000409647 BAZ1BQ9UIG0 1483 aaKnown RBP20.02■□□□□ 0.8
LONRF2-202ENST00000409647 CCDC88BA6NC98 1476 aa19.97■□□□□ 0.79
LONRF2-202ENST00000409647 CHIC1Q5VXU3 224 aa19.95■□□□□ 0.78
LONRF2-202ENST00000409647 CC2D2AQ9P2K1 1620 aa19.95■□□□□ 0.78
LONRF2-202ENST00000409647 NCAPD3P42695 1498 aa19.87■□□□□ 0.77
LONRF2-202ENST00000409647 HMGXB3Q12766 1538 aa19.84■□□□□ 0.77
LONRF2-202ENST00000409647 TRIM41Q8WV44 630 aa19.65■□□□□ 0.74
LONRF2-202ENST00000409647 ABCC8Q09428 1581 aa19.64■□□□□ 0.74
LONRF2-202ENST00000409647 DNAJC5BQ9UF47 199 aa19.61■□□□□ 0.73
LONRF2-202ENST00000409647 FAM9AQ8IZU1 332 aaPredicted RBP19.45■□□□□ 0.7
LONRF2-202ENST00000409647 CFTRP13569 1480 aa19.44■□□□□ 0.7
LONRF2-202ENST00000409647 NESP48681 1621 aa19.41■□□□□ 0.7
LONRF2-202ENST00000409647 CADPSQ9ULU8 1353 aa19.4■□□□□ 0.7
LONRF2-202ENST00000409647 PRDM2Q13029 1718 aa19.4■□□□□ 0.7
LONRF2-202ENST00000409647 WRNQ14191 1432 aaPredicted RBP eCLIP19.4■□□□□ 0.7
LONRF2-202ENST00000409647 SYNJ1O43426 1573 aa19.38■□□□□ 0.69
LONRF2-202ENST00000409647 HRCP23327 699 aa19.33■□□□□ 0.69
LONRF2-202ENST00000409647 LOC105371045A0A1W2PR82 267 aa19.32■□□□□ 0.68
LONRF2-202ENST00000409647 EHMT2Q96KQ7 1210 aa19.32■□□□□ 0.68
LONRF2-202ENST00000409647 FANCD2Q9BXW9 1451 aa19.24■□□□□ 0.67
LONRF2-202ENST00000409647 LAMC3Q9Y6N6 1575 aa19.23■□□□□ 0.67
LONRF2-202ENST00000409647 CUX1P39880 1505 aa19.23■□□□□ 0.67
LONRF2-202ENST00000409647 TOP2BQ02880 1626 aa19.22■□□□□ 0.67
LONRF2-202ENST00000409647 PCGF6Q9BYE7 350 aa19.22■□□□□ 0.67
LONRF2-202ENST00000409647 SOGA1O94964 1423 aa19.22■□□□□ 0.67
LONRF2-202ENST00000409647 BIVM-ERCC5R4GMW8 1640 aa19.2■□□□□ 0.66
LONRF2-202ENST00000409647 RUSC2Q8N2Y8 1516 aa19.18■□□□□ 0.66
LONRF2-202ENST00000409647 KIF21AQ7Z4S6 1674 aa19.17■□□□□ 0.66
LONRF2-202ENST00000409647 CEP164Q9UPV0 1460 aa19.11■□□□□ 0.65
LONRF2-202ENST00000409647 PDS5BQ9NTI5 1447 aa19.09■□□□□ 0.65
LONRF2-202ENST00000409647 FGD5Q6ZNL6 1462 aa19.04■□□□□ 0.64
LONRF2-202ENST00000409647 DNMBPQ6XZF7 1577 aa19.03■□□□□ 0.64
LONRF2-202ENST00000409647 URB2Q14146 1524 aaKnown RBP19.02■□□□□ 0.64
LONRF2-202ENST00000409647 TOPBP1Q92547 1522 aa19.02■□□□□ 0.64
LONRF2-202ENST00000409647 CSRNP3Q8WYN3 585 aa19■□□□□ 0.63
LONRF2-202ENST00000409647 EEA1Q15075 1411 aa18.97■□□□□ 0.63
LONRF2-202ENST00000409647 RAD54L2Q9Y4B4 1467 aa18.95■□□□□ 0.62
LONRF2-202ENST00000409647 POLA1P09884 1462 aaPredicted RBP18.93■□□□□ 0.62
LONRF2-202ENST00000409647 ERCC6Q03468 1493 aa18.93■□□□□ 0.62
LONRF2-202ENST00000409647 CUX2O14529 1486 aa18.92■□□□□ 0.62
LONRF2-202ENST00000409647 PPARGC1BQ86YN6 1023 aaKnown RBP18.89■□□□□ 0.61
LONRF2-202ENST00000409647 KIF27Q86VH2 1401 aa18.89■□□□□ 0.61
LONRF2-202ENST00000409647 MRC2Q9UBG0 1479 aa18.88■□□□□ 0.61
LONRF2-202ENST00000409647 TRIM26Q12899 539 aaPredicted RBP18.87■□□□□ 0.61
LONRF2-202ENST00000409647 UBTFP17480 764 aaKnown RBP18.86■□□□□ 0.61
LONRF2-202ENST00000409647 GOLGA3Q08378 1498 aa18.81■□□□□ 0.6
LONRF2-202ENST00000409647 RAPGEF2Q9Y4G8 1499 aa18.81■□□□□ 0.6
LONRF2-202ENST00000409647 KIF21BO75037 1637 aa18.81■□□□□ 0.6
LONRF2-202ENST00000409647 ABCA10Q8WWZ4 1543 aa18.78■□□□□ 0.6
LONRF2-202ENST00000409647 WDR97A6NE52 1622 aa18.78■□□□□ 0.6
LONRF2-202ENST00000409647 TDRD9Q8NDG6 1382 aaKnown RBP18.77■□□□□ 0.59
LONRF2-202ENST00000409647 THOC2Q8NI27 1593 aaKnown RBP18.77■□□□□ 0.59
LONRF2-202ENST00000409647 WDR62O43379 1518 aa18.76■□□□□ 0.59
LONRF2-202ENST00000409647 RANGAP1P46060 587 aaPredicted RBP18.75■□□□□ 0.59
LONRF2-202ENST00000409647 TARBP1Q13395 1621 aaKnown RBP18.74■□□□□ 0.59
LONRF2-202ENST00000409647 IGF1RP08069 1367 aa18.73■□□□□ 0.59
LONRF2-202ENST00000409647 PRXQ9BXM0 1461 aa18.72■□□□□ 0.59
LONRF2-202ENST00000409647 TNIKQ9UKE5 1360 aa18.71■□□□□ 0.59
LONRF2-202ENST00000409647 CEP162Q5TB80 1403 aa18.69■□□□□ 0.58
LONRF2-202ENST00000409647 ABCA5Q8WWZ7 1642 aa18.67■□□□□ 0.58
LONRF2-202ENST00000409647 GAPVD1Q14C86 1478 aa18.66■□□□□ 0.58
LONRF2-202ENST00000409647 ERICH3Q5RHP9 1530 aa18.66■□□□□ 0.58
LONRF2-202ENST00000409647 CARMIL1Q5VZK9 1371 aa18.66■□□□□ 0.58
LONRF2-202ENST00000409647 AQRO60306 1485 aaKnown RBP eCLIP18.65■□□□□ 0.58
LONRF2-202ENST00000409647 ZNF608Q9ULD9 1512 aaPredicted RBP18.64■□□□□ 0.57
LONRF2-202ENST00000409647 PBRM1Q86U86 1689 aa18.61■□□□□ 0.57
LONRF2-202ENST00000409647 IFT140Q96RY7 1462 aa18.61■□□□□ 0.57
LONRF2-202ENST00000409647 CUL7Q14999 1698 aa18.57■□□□□ 0.56
LONRF2-202ENST00000409647 CLIP1P30622 1438 aa18.55■□□□□ 0.56
LONRF2-202ENST00000409647 EIF4G3O43432 1585 aaKnown RBP18.54■□□□□ 0.56
LONRF2-202ENST00000409647 GRIN2BQ13224 1484 aa18.48■□□□□ 0.55
LONRF2-202ENST00000409647 ZEB1P37275 1124 aaPredicted RBP18.47■□□□□ 0.55
LONRF2-202ENST00000409647 ADAMTS12P58397 1594 aa18.45■□□□□ 0.54
LONRF2-202ENST00000409647 TTBK1Q5TCY1 1321 aaPredicted RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms