Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF2Q99496 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RNF2Q99496 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF2Q99496 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
RNF2Q99496 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.93■□□□□ 0.3
RNF2Q99496 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC16.93■□□□□ 0.3
RNF2Q99496 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF2Q99496 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF2Q99496 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC16.93■□□□□ 0.3
RNF2Q99496 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.93■□□□□ 0.3
RNF2Q99496 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF2Q99496 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF2Q99496 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC16.93■□□□□ 0.3
RNF2Q99496 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF2Q99496 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.93■□□□□ 0.3
RNF2Q99496 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC16.93■□□□□ 0.3
RNF2Q99496 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC16.93■□□□□ 0.3
RNF2Q99496 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.93■□□□□ 0.3
RNF2Q99496 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RNF2Q99496 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF2Q99496 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.93■□□□□ 0.3
RNF2Q99496 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF2Q99496 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC16.93■□□□□ 0.3
RNF2Q99496 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC16.93■□□□□ 0.3
RNF2Q99496 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF2Q99496 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RNF2Q99496 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF2Q99496 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.93■□□□□ 0.3
RNF2Q99496 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RNF2Q99496 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF2Q99496 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF2Q99496 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF2Q99496 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF2Q99496 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF2Q99496 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF2Q99496 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF2Q99496 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RNF2Q99496 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF2Q99496 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF2Q99496 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF2Q99496 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF2Q99496 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF2Q99496 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF2Q99496 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC16.92■□□□□ 0.3
RNF2Q99496 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
RNF2Q99496 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC16.92■□□□□ 0.3
RNF2Q99496 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.92■□□□□ 0.3
RNF2Q99496 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF2Q99496 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF2Q99496 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF2Q99496 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF2Q99496 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF2Q99496 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC16.91■□□□□ 0.3
RNF2Q99496 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF2Q99496 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF2Q99496 AC131212.1-201ENST00000613771 668 ntBASIC16.91■□□□□ 0.3
RNF2Q99496 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RNF2Q99496 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RNF2Q99496 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF2Q99496 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF2Q99496 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF2Q99496 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF2Q99496 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF2Q99496 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF2Q99496 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF2Q99496 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RNF2Q99496 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF2Q99496 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
RNF2Q99496 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF2Q99496 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF2Q99496 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF2Q99496 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF2Q99496 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF2Q99496 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF2Q99496 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF2Q99496 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF2Q99496 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF2Q99496 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF2Q99496 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF2Q99496 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF2Q99496 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RNF2Q99496 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RNF2Q99496 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC16.9■□□□□ 0.3
RNF2Q99496 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF2Q99496 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF2Q99496 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF2Q99496 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF2Q99496 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF2Q99496 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF2Q99496 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF2Q99496 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF2Q99496 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RNF2Q99496 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF2Q99496 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF2Q99496 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF2Q99496 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.9■□□□□ 0.3
RNF2Q99496 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC16.89■□□□□ 0.3
RNF2Q99496 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
RNF2Q99496 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
RNF2Q99496 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms