Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.93□□□□□ -0.02
PCP4P48539 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCP4P48539 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCP4P48539 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PCP4P48539 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCP4P48539 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCP4P48539 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
PCP4P48539 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCP4P48539 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PCP4P48539 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCP4P48539 AC124067.4-201ENST00000519691 2379 ntBASIC14.92□□□□□ -0.02
PCP4P48539 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCP4P48539 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCP4P48539 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCP4P48539 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCP4P48539 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCP4P48539 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
PCP4P48539 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCP4P48539 AC009053.2-201ENST00000563701 2365 ntBASIC14.92□□□□□ -0.02
PCP4P48539 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCP4P48539 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCP4P48539 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
PCP4P48539 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCP4P48539 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCP4P48539 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCP4P48539 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PCP4P48539 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC14.92□□□□□ -0.02
PCP4P48539 TNXA-203ENST00000507684 2038 ntBASIC14.92□□□□□ -0.02
PCP4P48539 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCP4P48539 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC14.91□□□□□ -0.02
PCP4P48539 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCP4P48539 AC141586.5-201ENST00000624546 2050 ntBASIC14.91□□□□□ -0.02
PCP4P48539 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PCP4P48539 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCP4P48539 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
PCP4P48539 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCP4P48539 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCP4P48539 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.91□□□□□ -0.02
PCP4P48539 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCP4P48539 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PCP4P48539 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCP4P48539 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCP4P48539 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PCP4P48539 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCP4P48539 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
PCP4P48539 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC14.91□□□□□ -0.02
PCP4P48539 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC14.91□□□□□ -0.02
PCP4P48539 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCP4P48539 AFG3L1P-217ENST00000557444 2447 ntBASIC14.91□□□□□ -0.02
PCP4P48539 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCP4P48539 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
PCP4P48539 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
PCP4P48539 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
PCP4P48539 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCP4P48539 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCP4P48539 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCP4P48539 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
PCP4P48539 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC14.9□□□□□ -0.02
PCP4P48539 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCP4P48539 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCP4P48539 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
PCP4P48539 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.9□□□□□ -0.02
PCP4P48539 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCP4P48539 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.9□□□□□ -0.02
PCP4P48539 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PCP4P48539 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
PCP4P48539 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCP4P48539 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCP4P48539 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCP4P48539 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
PCP4P48539 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCP4P48539 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCP4P48539 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
PCP4P48539 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCP4P48539 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
PCP4P48539 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCP4P48539 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCP4P48539 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCP4P48539 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PCP4P48539 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
PCP4P48539 LINC01006-201ENST00000333319 2292 ntBASIC14.89□□□□□ -0.03
PCP4P48539 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
PCP4P48539 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PCP4P48539 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCP4P48539 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PCP4P48539 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCP4P48539 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCP4P48539 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PCP4P48539 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
PCP4P48539 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCP4P48539 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCP4P48539 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCP4P48539 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCP4P48539 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCP4P48539 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCP4P48539 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC14.88□□□□□ -0.03
PCP4P48539 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC14.88□□□□□ -0.03
PCP4P48539 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC14.88□□□□□ -0.03
PCP4P48539 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCP4P48539 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms