Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLK3P49761 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CLK3P49761 AC004687.1-201ENST00000579003 1625 ntBASIC20.26■□□□□ 0.83
CLK3P49761 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLK3P49761 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLK3P49761 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CLK3P49761 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLK3P49761 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLK3P49761 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.26■□□□□ 0.83
CLK3P49761 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLK3P49761 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLK3P49761 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.25■□□□□ 0.83
CLK3P49761 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLK3P49761 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.25■□□□□ 0.83
CLK3P49761 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLK3P49761 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLK3P49761 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.25■□□□□ 0.83
CLK3P49761 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.25■□□□□ 0.83
CLK3P49761 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
CLK3P49761 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLK3P49761 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLK3P49761 AC135279.3-201ENST00000610945 1311 ntBASIC20.25■□□□□ 0.83
CLK3P49761 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLK3P49761 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.24■□□□□ 0.83
CLK3P49761 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CLK3P49761 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLK3P49761 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLK3P49761 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.24■□□□□ 0.83
CLK3P49761 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLK3P49761 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.24■□□□□ 0.83
CLK3P49761 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.24■□□□□ 0.83
CLK3P49761 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.24■□□□□ 0.83
CLK3P49761 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLK3P49761 PBX2P1-201ENST00000493219 1291 ntBASIC20.24■□□□□ 0.83
CLK3P49761 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.24■□□□□ 0.83
CLK3P49761 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CLK3P49761 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CLK3P49761 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLK3P49761 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLK3P49761 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLK3P49761 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLK3P49761 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CLK3P49761 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLK3P49761 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CLK3P49761 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLK3P49761 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLK3P49761 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLK3P49761 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.23■□□□□ 0.83
CLK3P49761 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLK3P49761 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLK3P49761 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLK3P49761 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CLK3P49761 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLK3P49761 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.23■□□□□ 0.83
CLK3P49761 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLK3P49761 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.23■□□□□ 0.83
CLK3P49761 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
CLK3P49761 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.23■□□□□ 0.83
CLK3P49761 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLK3P49761 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLK3P49761 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLK3P49761 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLK3P49761 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLK3P49761 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLK3P49761 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CLK3P49761 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.22■□□□□ 0.83
CLK3P49761 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.22■□□□□ 0.83
CLK3P49761 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLK3P49761 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CLK3P49761 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.22■□□□□ 0.83
CLK3P49761 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CLK3P49761 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLK3P49761 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.22■□□□□ 0.83
CLK3P49761 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
CLK3P49761 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
CLK3P49761 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLK3P49761 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLK3P49761 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLK3P49761 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.22■□□□□ 0.83
CLK3P49761 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLK3P49761 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.21■□□□□ 0.83
CLK3P49761 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLK3P49761 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLK3P49761 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLK3P49761 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLK3P49761 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLK3P49761 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLK3P49761 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.21■□□□□ 0.83
CLK3P49761 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLK3P49761 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.21■□□□□ 0.83
CLK3P49761 AC024257.2-201ENST00000549699 147 ntBASIC20.21■□□□□ 0.83
CLK3P49761 AL139246.5-201ENST00000606645 996 ntBASIC20.21■□□□□ 0.83
CLK3P49761 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLK3P49761 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CLK3P49761 AC005229.4-201ENST00000610085 2198 ntBASIC20.21■□□□□ 0.83
CLK3P49761 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.21■□□□□ 0.83
CLK3P49761 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.2■□□□□ 0.83
CLK3P49761 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLK3P49761 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLK3P49761 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms