Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
NPIPA3F8WFD2 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
NPIPA3F8WFD2 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
NPIPA3F8WFD2 HYLS1-202ENST00000425380 2061 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
NPIPA3F8WFD2 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC11□□□□□ -0.65
NPIPA3F8WFD2 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
NPIPA3F8WFD2 TUBE1-202ENST00000368662 2142 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
NPIPA3F8WFD2 AP005242.4-201ENST00000623533 2529 ntBASIC11□□□□□ -0.65
NPIPA3F8WFD2 BX324167.2-201ENST00000623717 3316 ntBASIC11□□□□□ -0.65
NPIPA3F8WFD2 CD300LF-202ENST00000326165 1764 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
NPIPA3F8WFD2 C10orf128-201ENST00000374148 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
NPIPA3F8WFD2 CFAP206-202ENST00000369562 2196 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
NPIPA3F8WFD2 PAMR1-205ENST00000611014 2613 ntTSL 5 BASIC11□□□□□ -0.65
NPIPA3F8WFD2 TP53TG3F-201ENST00000617705 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
NPIPA3F8WFD2 SDHD-201ENST00000375549 1439 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
NPIPA3F8WFD2 AP000925.1-201ENST00000425960 1449 ntBASIC11□□□□□ -0.65
NPIPA3F8WFD2 PCDHGA4-202ENST00000612927 2691 ntAPPRIS ALT2 BASIC11□□□□□ -0.65
NPIPA3F8WFD2 TMEM164-202ENST00000372068 5566 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
NPIPA3F8WFD2 CRHR2-201ENST00000341843 3131 ntTSL 5 BASIC11□□□□□ -0.65
NPIPA3F8WFD2 CHPF2-201ENST00000035307 3978 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
NPIPA3F8WFD2 PER1-211ENST00000581082 4521 ntTSL 5 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 CIITA-212ENST00000618207 2844 ntTSL 5 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 CLTC-215ENST00000621829 8587 ntAPPRIS ALT1 TSL 2 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 PPP1R18-202ENST00000399199 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 LINC01551-201ENST00000399387 1581 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 OTOG-202ENST00000399391 8778 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 AL358075.4-201ENST00000540385 1553 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 HEXA-209ENST00000567159 1582 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 ATP7B-201ENST00000242839 6638 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 PBOV1-201ENST00000527246 2506 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 TMEM184B-201ENST00000361684 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 CHCHD7-201ENST00000303759 1684 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 PCDHGA8-201ENST00000398604 4605 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 LDLRAD1-204ENST00000545928 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 TNC-201ENST00000341037 6786 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 RASGEF1B-201ENST00000264400 2277 ntAPPRIS P3 TSL 2 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 TMEM174-201ENST00000296776 1759 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 SIRT4-201ENST00000202967 1217 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 FOLR1-201ENST00000312293 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 CD8B-202ENST00000349455 849 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 AL391987.4-201ENST00000377547 439 ntTSL 3 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 CFAP36-205ENST00000407816 1125 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 PGAM1P7-201ENST00000413837 737 ntBASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 BANF1P4-201ENST00000420029 270 ntBASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 KIF9-204ENST00000425853 740 ntTSL 2 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 AC244453.1-201ENST00000427872 494 ntTSL 3 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 MTND6P14-201ENST00000433044 522 ntBASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 AC246680.1-201ENST00000444624 494 ntTSL 3 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 TIMM23B-202ENST00000451577 1152 ntTSL 2 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 LINC01287-203ENST00000454441 1007 ntTSL 5 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 AC016304.1-201ENST00000476363 413 ntBASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 RANBP6-202ENST00000485372 1000 ntTSL 2 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 AC010442.2-201ENST00000509301 407 ntBASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 AC138956.2-201ENST00000512934 528 ntTSL 5 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 HOXC-AS2-201ENST00000513533 504 ntTSL 2 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 AP001107.8-201ENST00000530805 479 ntTSL 3 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 AC069234.1-201ENST00000542620 583 ntTSL 3 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 AC025580.2-203ENST00000560647 702 ntTSL 3 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 AC009086.1-201ENST00000567219 309 ntBASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 PSME3-213ENST00000592169 826 ntTSL 3 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 AP2S1-209ENST00000601498 898 ntTSL 2 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 AC064862.6-203ENST00000605139 691 ntTSL 5 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 AL035420.3-201ENST00000619647 321 ntBASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 AC004233.4-201ENST00000621689 417 ntBASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 AC012442.3-201ENST00000636053 940 ntTSL 5 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 AC092471.2-201ENST00000637219 651 ntBASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 EPS8L3-203ENST00000369805 2325 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 LINC01164-201ENST00000341866 3384 ntTSL 2 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 NDST1-207ENST00000523767 3449 ntTSL 2 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 METTL22-203ENST00000561758 1312 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 CIZ1-228ENST00000634901 3462 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 VDR-206ENST00000549336 4644 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 MDGA1-207ENST00000505425 3021 ntTSL 5 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 AC092295.2-201ENST00000592087 1392 ntBASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 WASF3-201ENST00000335327 4790 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 ADGRE3-203ENST00000443157 1971 ntTSL 2 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 NDUFA5-212ENST00000618945 1432 ntTSL 2 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 AC105402.3-202ENST00000446781 2592 ntTSL 5 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 LONP2-203ENST00000535754 2580 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 SFPQ-201ENST00000357214 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 CFAP36-202ENST00000349456 2048 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 WDR81-201ENST00000309182 3808 ntTSL 2 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 SCARB2-202ENST00000452464 1495 ntTSL 2 BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 SLC8B1-213ENST00000552014 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 CYP1A2-201ENST00000343932 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 SCN4A-201ENST00000435607 7805 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 P4HA1-201ENST00000263556 2844 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 P4HA1-204ENST00000394890 2844 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 AL359532.1-201ENST00000608729 1560 ntBASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 PITRM1-201ENST00000224949 3450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
NPIPA3F8WFD2 CLDN4-203ENST00000435050 4163 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 RNF4-201ENST00000314289 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 PARN-203ENST00000437198 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 467.2 ms