RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 NISCHQ9Y2I1 1504 aa21.22■□□□□ 0.99
PCDHGA8-201ENST00000398604 DCAF8L2P0C7V8 631 aa20.71■□□□□ 0.91
PCDHGA8-201ENST00000398604 SUPT5HO00267 1087 aaKnown RBP19.45■□□□□ 0.7
PCDHGA8-201ENST00000398604 EHMT2Q96KQ7 1210 aa19.1■□□□□ 0.65
PCDHGA8-201ENST00000398604 SHROOM4Q9ULL8 1493 aa19.07■□□□□ 0.64
PCDHGA8-201ENST00000398604 FAM9AQ8IZU1 332 aaPredicted RBP18.45■□□□□ 0.54
PCDHGA8-201ENST00000398604 TTBK1Q5TCY1 1321 aaPredicted RBP18.36■□□□□ 0.53
PCDHGA8-201ENST00000398604 APLP2Q06481 763 aa18.23■□□□□ 0.51
PCDHGA8-201ENST00000398604 RANGAP1P46060 587 aaPredicted RBP18.21■□□□□ 0.51
PCDHGA8-201ENST00000398604 CCDC180Q9P1Z9 1646 aa18.13■□□□□ 0.49
PCDHGA8-201ENST00000398604 ABCC9O60706 1549 aa18.08■□□□□ 0.48
PCDHGA8-201ENST00000398604 PCGF6Q9BYE7 350 aa17.98■□□□□ 0.47
PCDHGA8-201ENST00000398604 ATP1B4Q9UN42 357 aaPredicted RBP17.93■□□□□ 0.46
PCDHGA8-201ENST00000398604 TRIM41Q8WV44 630 aa17.81■□□□□ 0.44
PCDHGA8-201ENST00000398604 UBTFP17480 764 aaKnown RBP17.71■□□□□ 0.43
PCDHGA8-201ENST00000398604 PELP1Q8IZL8 1130 aaKnown RBP17.69■□□□□ 0.42
PCDHGA8-201ENST00000398604 PPARGC1BQ86YN6 1023 aaKnown RBP17.65■□□□□ 0.42
PCDHGA8-201ENST00000398604 ZCCHC6Q5VYS8 1495 aaKnown RBP17.64■□□□□ 0.41
PCDHGA8-201ENST00000398604 CCER1Q8TC90 406 aaPredicted RBP17.61■□□□□ 0.41
PCDHGA8-201ENST00000398604 PABPN1Q86U42 306 aaKnown RBP eCLIP17.42■□□□□ 0.38
PCDHGA8-201ENST00000398604 RB1CC1Q8TDY2 1594 aa17.41■□□□□ 0.38
PCDHGA8-201ENST00000398604 NACADO15069 1562 aa17.38■□□□□ 0.37
PCDHGA8-201ENST00000398604 YTHDC1Q96MU7 727 aaKnown RBP17.31■□□□□ 0.36
PCDHGA8-201ENST00000398604 ITGAEP38570 1179 aa17.31■□□□□ 0.36
PCDHGA8-201ENST00000398604 CHIC1Q5VXU3 224 aa17.31■□□□□ 0.36
PCDHGA8-201ENST00000398604 DCAF1Q9Y4B6 1507 aa17.28■□□□□ 0.36
PCDHGA8-201ENST00000398604 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.27■□□□□ 0.36
PCDHGA8-201ENST00000398604 HRCP23327 699 aa17.27■□□□□ 0.36
PCDHGA8-201ENST00000398604 HNRNPUL2Q1KMD3 747 aaKnown RBP17.27■□□□□ 0.36
PCDHGA8-201ENST00000398604 CENPBP07199 599 aaPredicted RBP17.26■□□□□ 0.35
PCDHGA8-201ENST00000398604 MYT1LQ9UL68 1186 aa17.24■□□□□ 0.35
PCDHGA8-201ENST00000398604 LOC105371045A0A1W2PR82 267 aa17.22■□□□□ 0.35
PCDHGA8-201ENST00000398604 ZEB1P37275 1124 aaPredicted RBP17.2■□□□□ 0.34
PCDHGA8-201ENST00000398604 SCRIBQ14160 1630 aa17.2■□□□□ 0.34
PCDHGA8-201ENST00000398604 CNGB1Q14028 1251 aaPredicted RBP17.16■□□□□ 0.34
PCDHGA8-201ENST00000398604 POLR3GLQ9BT43 218 aa17.14■□□□□ 0.33
PCDHGA8-201ENST00000398604 ERICH6Q7L0X2 663 aa17.13■□□□□ 0.33
PCDHGA8-201ENST00000398604 MYO15BQ96JP2 1530 aa17.06■□□□□ 0.32
PCDHGA8-201ENST00000398604 TRIM26Q12899 539 aaPredicted RBP17.04■□□□□ 0.32
PCDHGA8-201ENST00000398604 NEFLP07196 543 aa17.02■□□□□ 0.31
PCDHGA8-201ENST00000398604 SLC4A1APQ9BWU0 796 aaKnown RBP16.8■□□□□ 0.28
PCDHGA8-201ENST00000398604 FAM50AQ14320 339 aaKnown RBP16.69■□□□□ 0.26
PCDHGA8-201ENST00000398604 FBLN2P98095 1184 aa16.68■□□□□ 0.26
PCDHGA8-201ENST00000398604 RSF1Q96T23 1441 aaPredicted RBP16.66■□□□□ 0.26
PCDHGA8-201ENST00000398604 BAZ1AQ9NRL2 1556 aaPredicted RBP16.65■□□□□ 0.26
PCDHGA8-201ENST00000398604 TRIM52Q96A61 297 aa16.6■□□□□ 0.25
PCDHGA8-201ENST00000398604 ARID3CA6NKF2 412 aa16.58■□□□□ 0.24
PCDHGA8-201ENST00000398604 NEUROD1Q13562 356 aa16.58■□□□□ 0.24
PCDHGA8-201ENST00000398604 BAZ1BQ9UIG0 1483 aaKnown RBP16.54■□□□□ 0.24
PCDHGA8-201ENST00000398604 ZNF326Q5BKZ1 582 aaKnown RBP16.54■□□□□ 0.24
PCDHGA8-201ENST00000398604 DAXXQ9UER7 740 aaPredicted RBP16.53■□□□□ 0.24
PCDHGA8-201ENST00000398604 CECR2Q9BXF3 1484 aa16.5■□□□□ 0.23
PCDHGA8-201ENST00000398604 P3H3Q8IVL6 736 aa16.5■□□□□ 0.23
PCDHGA8-201ENST00000398604 DIEXFQ68CQ4 756 aaKnown RBP16.44■□□□□ 0.22
PCDHGA8-201ENST00000398604 SMARCA2P51531 1590 aa16.41■□□□□ 0.22
PCDHGA8-201ENST00000398604 MYT1Q01538 1121 aa16.4■□□□□ 0.22
PCDHGA8-201ENST00000398604 CLSPNQ9HAW4 1339 aa16.4■□□□□ 0.22
PCDHGA8-201ENST00000398604 MROH2BQ7Z745 1585 aa16.36■□□□□ 0.21
PCDHGA8-201ENST00000398604 BCL11AQ9H165 835 aa16.34■□□□□ 0.21
PCDHGA8-201ENST00000398604 BCANQ96GW7 911 aa16.31■□□□□ 0.2
PCDHGA8-201ENST00000398604 CSRNP3Q8WYN3 585 aa16.29■□□□□ 0.2
PCDHGA8-201ENST00000398604 ZNF777Q9ULD5 760 aaPredicted RBP16.29■□□□□ 0.2
PCDHGA8-201ENST00000398604 SLC24A1O60721 1099 aa16.26■□□□□ 0.19
PCDHGA8-201ENST00000398604 WIZO95785 1651 aa16.23■□□□□ 0.19
PCDHGA8-201ENST00000398604 PLPPR3Q6T4P5 718 aa16.23■□□□□ 0.19
PCDHGA8-201ENST00000398604 GTF3C3Q9Y5Q9 886 aa16.18■□□□□ 0.18
PCDHGA8-201ENST00000398604 SMARCA4P51532 1647 aa16.17■□□□□ 0.18
PCDHGA8-201ENST00000398604 ATAD2BQ9ULI0 1458 aa16.16■□□□□ 0.18
PCDHGA8-201ENST00000398604 TOP2AP11388 1531 aaKnown RBP16.14■□□□□ 0.17
PCDHGA8-201ENST00000398604 ANP32CO43423 234 aa16.14■□□□□ 0.17
PCDHGA8-201ENST00000398604 WRNQ14191 1432 aaPredicted RBP eCLIP16.13■□□□□ 0.17
PCDHGA8-201ENST00000398604 ZNF316A6NFI3 1004 aaPredicted RBP16.12■□□□□ 0.17
PCDHGA8-201ENST00000398604 EEA1Q15075 1411 aa16.12■□□□□ 0.17
PCDHGA8-201ENST00000398604 ERCC6Q03468 1493 aa16.11■□□□□ 0.17
PCDHGA8-201ENST00000398604 PDS5BQ9NTI5 1447 aa16.1■□□□□ 0.17
PCDHGA8-201ENST00000398604 CHGAP10645 457 aaKnown RBP16.08■□□□□ 0.16
PCDHGA8-201ENST00000398604 CCDC88BA6NC98 1476 aa16.07■□□□□ 0.16
PCDHGA8-201ENST00000398604 ACIN1Q9UKV3 1341 aaKnown RBP16.07■□□□□ 0.16
PCDHGA8-201ENST00000398604 RTL5Q5HYW3 569 aaPredicted RBP16.03■□□□□ 0.16
PCDHGA8-201ENST00000398604 NCAPD3P42695 1498 aa16.02■□□□□ 0.15
PCDHGA8-201ENST00000398604 CADPSQ9ULU8 1353 aa16.02■□□□□ 0.15
PCDHGA8-201ENST00000398604 EIF4G1Q04637 1599 aaKnown RBP16■□□□□ 0.15
PCDHGA8-201ENST00000398604 ZBTB47Q9UFB7 747 aaPredicted RBP16■□□□□ 0.15
PCDHGA8-201ENST00000398604 ESF1Q9H501 851 aaKnown RBP15.99■□□□□ 0.15
PCDHGA8-201ENST00000398604 KIF27Q86VH2 1401 aa15.99■□□□□ 0.15
PCDHGA8-201ENST00000398604 CANXP27824 592 aaKnown RBP15.98■□□□□ 0.15
PCDHGA8-201ENST00000398604 CHIC2Q9UKJ5 165 aa15.98■□□□□ 0.15
PCDHGA8-201ENST00000398604 CHMP7Q8WUX9 453 aaPredicted RBP15.97■□□□□ 0.15
PCDHGA8-201ENST00000398604 CDK11AQ9UQ88 783 aaPredicted RBP15.97■□□□□ 0.15
PCDHGA8-201ENST00000398604 SENP3Q9H4L4 574 aaPredicted RBP15.96■□□□□ 0.15
PCDHGA8-201ENST00000398604 ABCC8Q09428 1581 aa15.96■□□□□ 0.15
PCDHGA8-201ENST00000398604 SCAF1Q9H7N4 1312 aaKnown RBP15.96■□□□□ 0.15
PCDHGA8-201ENST00000398604 STAG3Q9UJ98 1225 aa15.95■□□□□ 0.14
PCDHGA8-201ENST00000398604 SALL2Q9Y467 1007 aaPredicted RBP15.94■□□□□ 0.14
PCDHGA8-201ENST00000398604 NEFMP07197 916 aa15.94■□□□□ 0.14
PCDHGA8-201ENST00000398604 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.94■□□□□ 0.14
PCDHGA8-201ENST00000398604 NPM1P06748 294 aaKnown RBP eCLIP15.91■□□□□ 0.14
PCDHGA8-201ENST00000398604 BICRAQ9NZM4 1560 aa15.87■□□□□ 0.13
PCDHGA8-201ENST00000398604 SOGA1O94964 1423 aa15.87■□□□□ 0.13
PCDHGA8-201ENST00000398604 DDX10Q13206 875 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms