RNA–Protein interactions for RNA: ENST00000341037.8

TNC-201, Transcript of tenascin C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNC, Length 6,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-201ENST00000341037 DCAF8L2P0C7V8 631 aa19.94■□□□□ 0.78
TNC-201ENST00000341037 SUPT5HO00267 1087 aaKnown RBP18.77■□□□□ 0.6
TNC-201ENST00000341037 EHMT2Q96KQ7 1210 aa18.54■□□□□ 0.56
TNC-201ENST00000341037 SHROOM4Q9ULL8 1493 aa18.49■□□□□ 0.55
TNC-201ENST00000341037 NISCHQ9Y2I1 1504 aa18.26■□□□□ 0.51
TNC-201ENST00000341037 APLP2Q06481 763 aa17.95■□□□□ 0.46
TNC-201ENST00000341037 PELP1Q8IZL8 1130 aaKnown RBP17.92■□□□□ 0.46
TNC-201ENST00000341037 TTBK1Q5TCY1 1321 aaPredicted RBP17.9■□□□□ 0.46
TNC-201ENST00000341037 FAM9AQ8IZU1 332 aaPredicted RBP17.82■□□□□ 0.44
TNC-201ENST00000341037 RANGAP1P46060 587 aaPredicted RBP17.69■□□□□ 0.42
TNC-201ENST00000341037 ATP1B4Q9UN42 357 aaPredicted RBP17.53■□□□□ 0.4
TNC-201ENST00000341037 PCGF6Q9BYE7 350 aa17.52■□□□□ 0.4
TNC-201ENST00000341037 ERICH6Q7L0X2 663 aa17.37■□□□□ 0.37
TNC-201ENST00000341037 CCER1Q8TC90 406 aaPredicted RBP17.29■□□□□ 0.36
TNC-201ENST00000341037 TRIM41Q8WV44 630 aa17.29■□□□□ 0.36
TNC-201ENST00000341037 UBTFP17480 764 aaKnown RBP17.22■□□□□ 0.35
TNC-201ENST00000341037 CENPBP07199 599 aaPredicted RBP17.2■□□□□ 0.34
TNC-201ENST00000341037 YTHDC1Q96MU7 727 aaKnown RBP17.1■□□□□ 0.33
TNC-201ENST00000341037 ZEB1P37275 1124 aaPredicted RBP17.09■□□□□ 0.33
TNC-201ENST00000341037 PPARGC1BQ86YN6 1023 aaKnown RBP17.06■□□□□ 0.32
TNC-201ENST00000341037 NEFLP07196 543 aa16.98■□□□□ 0.31
TNC-201ENST00000341037 MYT1LQ9UL68 1186 aa16.92■□□□□ 0.3
TNC-201ENST00000341037 POLR3GLQ9BT43 218 aa16.84■□□□□ 0.29
TNC-201ENST00000341037 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.83■□□□□ 0.29
TNC-201ENST00000341037 HNRNPUL2Q1KMD3 747 aaKnown RBP16.83■□□□□ 0.29
TNC-201ENST00000341037 ITGAEP38570 1179 aa16.83■□□□□ 0.28
TNC-201ENST00000341037 CHIC1Q5VXU3 224 aa16.75■□□□□ 0.27
TNC-201ENST00000341037 CNGB1Q14028 1251 aaPredicted RBP16.73■□□□□ 0.27
TNC-201ENST00000341037 DAXXQ9UER7 740 aaPredicted RBP16.61■□□□□ 0.25
TNC-201ENST00000341037 TRIM26Q12899 539 aaPredicted RBP16.61■□□□□ 0.25
TNC-201ENST00000341037 SLC4A1APQ9BWU0 796 aaKnown RBP16.59■□□□□ 0.25
TNC-201ENST00000341037 MYT1Q01538 1121 aa16.58■□□□□ 0.24
TNC-201ENST00000341037 LOC105371045A0A1W2PR82 267 aa16.51■□□□□ 0.23
TNC-201ENST00000341037 HRCP23327 699 aa16.43■□□□□ 0.22
TNC-201ENST00000341037 FAM50AQ14320 339 aaKnown RBP16.34■□□□□ 0.21
TNC-201ENST00000341037 CLSPNQ9HAW4 1339 aa16.28■□□□□ 0.2
TNC-201ENST00000341037 TRIM52Q96A61 297 aa16.27■□□□□ 0.2
TNC-201ENST00000341037 ZNF316A6NFI3 1004 aaPredicted RBP16.25■□□□□ 0.19
TNC-201ENST00000341037 PABPN1Q86U42 306 aaKnown RBP eCLIP16.22■□□□□ 0.19
TNC-201ENST00000341037 NEUROD1Q13562 356 aa16.21■□□□□ 0.19
TNC-201ENST00000341037 ZNF326Q5BKZ1 582 aaKnown RBP16.15■□□□□ 0.18
TNC-201ENST00000341037 DIEXFQ68CQ4 756 aaKnown RBP16.14■□□□□ 0.17
TNC-201ENST00000341037 ABCC9O60706 1549 aa16.12■□□□□ 0.17
TNC-201ENST00000341037 FBLN2P98095 1184 aa16.11■□□□□ 0.17
TNC-201ENST00000341037 RTL5Q5HYW3 569 aaPredicted RBP16.11■□□□□ 0.17
TNC-201ENST00000341037 SLC24A1O60721 1099 aa16.07■□□□□ 0.16
TNC-201ENST00000341037 BCANQ96GW7 911 aa16.07■□□□□ 0.16
TNC-201ENST00000341037 BCL11AQ9H165 835 aa16.05■□□□□ 0.16
TNC-201ENST00000341037 ARID3CA6NKF2 412 aa16■□□□□ 0.15
TNC-201ENST00000341037 ZBTB47Q9UFB7 747 aaPredicted RBP15.96■□□□□ 0.15
TNC-201ENST00000341037 ANP32CO43423 234 aa15.94■□□□□ 0.14
TNC-201ENST00000341037 P3H3Q8IVL6 736 aa15.92■□□□□ 0.14
TNC-201ENST00000341037 CANXP27824 592 aaKnown RBP15.92■□□□□ 0.14
TNC-201ENST00000341037 ZNF777Q9ULD5 760 aaPredicted RBP15.84■□□□□ 0.13
TNC-201ENST00000341037 CDK11AQ9UQ88 783 aaPredicted RBP15.82■□□□□ 0.12
TNC-201ENST00000341037 GTF3C3Q9Y5Q9 886 aa15.8■□□□□ 0.12
TNC-201ENST00000341037 PLPPR3Q6T4P5 718 aa15.8■□□□□ 0.12
TNC-201ENST00000341037 NEFMP07197 916 aa15.79■□□□□ 0.12
TNC-201ENST00000341037 CHGAP10645 457 aaKnown RBP15.68■□□□□ 0.1
TNC-201ENST00000341037 NPM2Q86SE8 214 aaKnown RBP15.67■□□□□ 0.1
TNC-201ENST00000341037 ESF1Q9H501 851 aaKnown RBP15.67■□□□□ 0.1
TNC-201ENST00000341037 STAG3Q9UJ98 1225 aa15.64■□□□□ 0.09
TNC-201ENST00000341037 ANP32AP39687 249 aaKnown RBP15.57■□□□□ 0.08
TNC-201ENST00000341037 CSRNP3Q8WYN3 585 aa15.56■□□□□ 0.08
TNC-201ENST00000341037 SCRIBQ14160 1630 aa15.55■□□□□ 0.08
TNC-201ENST00000341037 SALL2Q9Y467 1007 aaPredicted RBP15.52■□□□□ 0.08
TNC-201ENST00000341037 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.51■□□□□ 0.07
TNC-201ENST00000341037 TONSLQ96HA7 1378 aa15.49■□□□□ 0.07
TNC-201ENST00000341037 FAM9BQ8IZU0 186 aa15.48■□□□□ 0.07
TNC-201ENST00000341037 HSP90AA1P07900 732 aaKnown RBP15.47■□□□□ 0.07
TNC-201ENST00000341037 CHIC2Q9UKJ5 165 aa15.47■□□□□ 0.07
TNC-201ENST00000341037 NPM1P06748 294 aaKnown RBP eCLIP15.46■□□□□ 0.07
TNC-201ENST00000341037 FKBP8Q14318 412 aa15.46■□□□□ 0.07
TNC-201ENST00000341037 SCAF1Q9H7N4 1312 aaKnown RBP15.46■□□□□ 0.07
TNC-201ENST00000341037 SENP3Q9H4L4 574 aaPredicted RBP15.44■□□□□ 0.06
TNC-201ENST00000341037 ACIN1Q9UKV3 1341 aaKnown RBP15.44■□□□□ 0.06
TNC-201ENST00000341037 HNRNPUQ00839 825 aaKnown RBP eCLIP15.42■□□□□ 0.06
TNC-201ENST00000341037 DDX10Q13206 875 aaKnown RBP15.4■□□□□ 0.06
TNC-201ENST00000341037 PLEKHG5O94827 1062 aa15.39■□□□□ 0.05
TNC-201ENST00000341037 KDM2AQ9Y2K7 1162 aa15.38■□□□□ 0.05
TNC-201ENST00000341037 A0A0G2JS52 829 aa15.38■□□□□ 0.05
TNC-201ENST00000341037 ANP32BQ92688 251 aaKnown RBP15.38■□□□□ 0.05
TNC-201ENST00000341037 ZBTB7CA1YPR0 619 aa15.37■□□□□ 0.05
TNC-201ENST00000341037 UPF2Q9HAU5 1272 aaKnown RBP15.36■□□□□ 0.05
TNC-201ENST00000341037 WDR43Q15061 677 aaKnown RBP eCLIP15.32■□□□□ 0.04
TNC-201ENST00000341037 TMC1Q8TDI8 760 aa15.32■□□□□ 0.04
TNC-201ENST00000341037 ARXQ96QS3 562 aa15.31■□□□□ 0.04
TNC-201ENST00000341037 EIF5BO60841 1220 aaKnown RBP15.27■□□□□ 0.04
TNC-201ENST00000341037 C14orf37Q86TY3 774 aa15.27■□□□□ 0.03
TNC-201ENST00000341037 HIRIP3Q9BW71 556 aaPredicted RBP15.25■□□□□ 0.03
TNC-201ENST00000341037 NBR1Q14596 966 aa15.25■□□□□ 0.03
TNC-201ENST00000341037 CCDC136Q96JN2 1154 aa15.25■□□□□ 0.03
TNC-201ENST00000341037 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.24■□□□□ 0.03
TNC-201ENST00000341037 IRX6P78412 446 aaPredicted RBP15.24■□□□□ 0.03
TNC-201ENST00000341037 CHMP7Q8WUX9 453 aaPredicted RBP15.24■□□□□ 0.03
TNC-201ENST00000341037 TSPY4P0CV99 314 aa15.23■□□□□ 0.03
TNC-201ENST00000341037 TSPY10P0CW01 314 aa15.23■□□□□ 0.03
TNC-201ENST00000341037 MRS2Q9HD23 443 aa15.21■□□□□ 0.03
TNC-201ENST00000341037 MTUS2Q5JR59 1369 aa15.21■□□□□ 0.03
TNC-201ENST00000341037 KCNH8Q96L42 1107 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms