RNA–Protein interactions for RNA: ENST00000549336.5

VDR-206, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDR, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-206ENST00000549336 NISCHQ9Y2I1 1504 aa22.75■■□□□ 1.23
VDR-206ENST00000549336 DCAF8L2P0C7V8 631 aa21.49■■□□□ 1.03
VDR-206ENST00000549336 SHROOM4Q9ULL8 1493 aa20.04■□□□□ 0.8
VDR-206ENST00000549336 SUPT5HO00267 1087 aaKnown RBP19.89■□□□□ 0.78
VDR-206ENST00000549336 ABCC9O60706 1549 aa19.57■□□□□ 0.72
VDR-206ENST00000549336 CCDC180Q9P1Z9 1646 aa19.34■□□□□ 0.69
VDR-206ENST00000549336 PABPN1Q86U42 306 aaKnown RBP eCLIP18.94■□□□□ 0.62
VDR-206ENST00000549336 ZCCHC6Q5VYS8 1495 aaKnown RBP18.87■□□□□ 0.61
VDR-206ENST00000549336 FAM9AQ8IZU1 332 aaPredicted RBP18.8■□□□□ 0.6
VDR-206ENST00000549336 TRIM41Q8WV44 630 aa18.71■□□□□ 0.59
VDR-206ENST00000549336 RB1CC1Q8TDY2 1594 aa18.71■□□□□ 0.59
VDR-206ENST00000549336 NACADO15069 1562 aa18.63■□□□□ 0.57
VDR-206ENST00000549336 EHMT2Q96KQ7 1210 aa18.6■□□□□ 0.57
VDR-206ENST00000549336 APLP2Q06481 763 aa18.58■□□□□ 0.56
VDR-206ENST00000549336 SCRIBQ14160 1630 aa18.54■□□□□ 0.56
VDR-206ENST00000549336 DCAF1Q9Y4B6 1507 aa18.42■□□□□ 0.54
VDR-206ENST00000549336 UBTFP17480 764 aaKnown RBP18.31■□□□□ 0.52
VDR-206ENST00000549336 MYO15BQ96JP2 1530 aa18.18■□□□□ 0.5
VDR-206ENST00000549336 RANGAP1P46060 587 aaPredicted RBP18.18■□□□□ 0.5
VDR-206ENST00000549336 ATP1B4Q9UN42 357 aaPredicted RBP18.1■□□□□ 0.49
VDR-206ENST00000549336 CHIC1Q5VXU3 224 aa18.06■□□□□ 0.48
VDR-206ENST00000549336 BAZ1AQ9NRL2 1556 aaPredicted RBP17.88■□□□□ 0.45
VDR-206ENST00000549336 TTBK1Q5TCY1 1321 aaPredicted RBP17.84■□□□□ 0.45
VDR-206ENST00000549336 BAZ1BQ9UIG0 1483 aaKnown RBP17.84■□□□□ 0.45
VDR-206ENST00000549336 RSF1Q96T23 1441 aaPredicted RBP17.84■□□□□ 0.45
VDR-206ENST00000549336 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.79■□□□□ 0.44
VDR-206ENST00000549336 HNRNPUL2Q1KMD3 747 aaKnown RBP17.79■□□□□ 0.44
VDR-206ENST00000549336 FBLN2P98095 1184 aa17.73■□□□□ 0.43
VDR-206ENST00000549336 CECR2Q9BXF3 1484 aa17.66■□□□□ 0.42
VDR-206ENST00000549336 SMARCA2P51531 1590 aa17.63■□□□□ 0.41
VDR-206ENST00000549336 CSRNP3Q8WYN3 585 aa17.63■□□□□ 0.41
VDR-206ENST00000549336 LOC105371045A0A1W2PR82 267 aa17.61■□□□□ 0.41
VDR-206ENST00000549336 PCGF6Q9BYE7 350 aa17.57■□□□□ 0.4
VDR-206ENST00000549336 MYT1LQ9UL68 1186 aa17.52■□□□□ 0.4
VDR-206ENST00000549336 ERCC6Q03468 1493 aa17.5■□□□□ 0.39
VDR-206ENST00000549336 MROH2BQ7Z745 1585 aa17.48■□□□□ 0.39
VDR-206ENST00000549336 CCER1Q8TC90 406 aaPredicted RBP17.41■□□□□ 0.38
VDR-206ENST00000549336 WRNQ14191 1432 aaPredicted RBP eCLIP17.4■□□□□ 0.38
VDR-206ENST00000549336 PDS5BQ9NTI5 1447 aa17.39■□□□□ 0.38
VDR-206ENST00000549336 ZEB1P37275 1124 aaPredicted RBP17.39■□□□□ 0.37
VDR-206ENST00000549336 PPARGC1BQ86YN6 1023 aaKnown RBP17.39■□□□□ 0.37
VDR-206ENST00000549336 CHMP7Q8WUX9 453 aaPredicted RBP17.38■□□□□ 0.37
VDR-206ENST00000549336 TRIM26Q12899 539 aaPredicted RBP17.37■□□□□ 0.37
VDR-206ENST00000549336 ATAD2BQ9ULI0 1458 aa17.37■□□□□ 0.37
VDR-206ENST00000549336 CDK11AQ9UQ88 783 aaPredicted RBP17.34■□□□□ 0.37
VDR-206ENST00000549336 EEA1Q15075 1411 aa17.34■□□□□ 0.37
VDR-206ENST00000549336 SMARCA4P51532 1647 aa17.32■□□□□ 0.36
VDR-206ENST00000549336 ITGAEP38570 1179 aa17.31■□□□□ 0.36
VDR-206ENST00000549336 TOP2AP11388 1531 aaKnown RBP17.29■□□□□ 0.36
VDR-206ENST00000549336 NPM1P06748 294 aaKnown RBP eCLIP17.29■□□□□ 0.36
VDR-206ENST00000549336 CCDC88BA6NC98 1476 aa17.27■□□□□ 0.36
VDR-206ENST00000549336 CADPSQ9ULU8 1353 aa17.27■□□□□ 0.35
VDR-206ENST00000549336 KIF27Q86VH2 1401 aa17.27■□□□□ 0.35
VDR-206ENST00000549336 P3H3Q8IVL6 736 aa17.26■□□□□ 0.35
VDR-206ENST00000549336 FAM50AQ14320 339 aaKnown RBP17.19■□□□□ 0.34
VDR-206ENST00000549336 EIF4G1Q04637 1599 aaKnown RBP17.19■□□□□ 0.34
VDR-206ENST00000549336 NCAPD3P42695 1498 aa17.18■□□□□ 0.34
VDR-206ENST00000549336 WIZO95785 1651 aa17.18■□□□□ 0.34
VDR-206ENST00000549336 ARID3CA6NKF2 412 aa17.08■□□□□ 0.32
VDR-206ENST00000549336 CEP164Q9UPV0 1460 aa17.06■□□□□ 0.32
VDR-206ENST00000549336 GOLGA3Q08378 1498 aa17.05■□□□□ 0.32
VDR-206ENST00000549336 CUX2O14529 1486 aa17.04■□□□□ 0.32
VDR-206ENST00000549336 ABCC8Q09428 1581 aa17.03■□□□□ 0.32
VDR-206ENST00000549336 SOGA1O94964 1423 aa17.02■□□□□ 0.32
VDR-206ENST00000549336 CLIP1P30622 1438 aa16.98■□□□□ 0.31
VDR-206ENST00000549336 TRIM52Q96A61 297 aa16.98■□□□□ 0.31
VDR-206ENST00000549336 FANCD2Q9BXW9 1451 aa16.98■□□□□ 0.31
VDR-206ENST00000549336 CARMIL1Q5VZK9 1371 aa16.97■□□□□ 0.31
VDR-206ENST00000549336 ZNF777Q9ULD5 760 aaPredicted RBP16.96■□□□□ 0.31
VDR-206ENST00000549336 BICRAQ9NZM4 1560 aa16.95■□□□□ 0.3
VDR-206ENST00000549336 CC2D2AQ9P2K1 1620 aa16.93■□□□□ 0.3
VDR-206ENST00000549336 HMGXB3Q12766 1538 aa16.92■□□□□ 0.3
VDR-206ENST00000549336 MTUS2Q5JR59 1369 aa16.9■□□□□ 0.3
VDR-206ENST00000549336 PLEKHD1A6NEE1 506 aa16.9■□□□□ 0.3
VDR-206ENST00000549336 TDRD9Q8NDG6 1382 aaKnown RBP16.89■□□□□ 0.29
VDR-206ENST00000549336 TNIKQ9UKE5 1360 aa16.89■□□□□ 0.29
VDR-206ENST00000549336 ESF1Q9H501 851 aaKnown RBP16.85■□□□□ 0.29
VDR-206ENST00000549336 CEP162Q5TB80 1403 aa16.81■□□□□ 0.28
VDR-206ENST00000549336 TSPY4P0CV99 314 aa16.8■□□□□ 0.28
VDR-206ENST00000549336 TSPY10P0CW01 314 aa16.8■□□□□ 0.28
VDR-206ENST00000549336 CARMIL2Q6F5E8 1435 aa16.8■□□□□ 0.28
VDR-206ENST00000549336 CFTRP13569 1480 aa16.77■□□□□ 0.28
VDR-206ENST00000549336 FHAD1B1AJZ9 1412 aa16.77■□□□□ 0.27
VDR-206ENST00000549336 KCNH8Q96L42 1107 aa16.74■□□□□ 0.27
VDR-206ENST00000549336 ACIN1Q9UKV3 1341 aaKnown RBP16.69■□□□□ 0.26
VDR-206ENST00000549336 RAPGEF2Q9Y4G8 1499 aa16.68■□□□□ 0.26
VDR-206ENST00000549336 PELP1Q8IZL8 1130 aaKnown RBP16.67■□□□□ 0.26
VDR-206ENST00000549336 POLR3GLQ9BT43 218 aa16.66■□□□□ 0.26
VDR-206ENST00000549336 FGD5Q6ZNL6 1462 aa16.66■□□□□ 0.26
VDR-206ENST00000549336 DNAJC5BQ9UF47 199 aa16.65■□□□□ 0.26
VDR-206ENST00000549336 MRC2Q9UBG0 1479 aa16.65■□□□□ 0.26
VDR-206ENST00000549336 UNC13AQ9UPW8 1703 aa16.64■□□□□ 0.25
VDR-206ENST00000549336 NEUROD1Q13562 356 aa16.64■□□□□ 0.25
VDR-206ENST00000549336 CFDP1Q9UEE9 299 aaPredicted RBP16.63■□□□□ 0.25
VDR-206ENST00000549336 OSCARQ8IYS5 282 aa16.63■□□□□ 0.25
VDR-206ENST00000549336 GAPVD1Q14C86 1478 aa16.62■□□□□ 0.25
VDR-206ENST00000549336 JPH4Q96JJ6 628 aa16.6■□□□□ 0.25
VDR-206ENST00000549336 FMN1Q68DA7 1419 aa16.6■□□□□ 0.25
VDR-206ENST00000549336 PEG3Q9GZU2 1588 aa16.6■□□□□ 0.25
VDR-206ENST00000549336 NESP48681 1621 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms