RNA–Protein interactions for RNA: ENST00000341866.3

LINC01164-201, Transcript of long intergenic non-protein coding RNA 1164, humanhuman

TSL 2 BASIC

Gene LINC01164, Length 3,384 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01164-201ENST00000341866 NISCHQ9Y2I1 1504 aa27.34■■□□□ 1.97
LINC01164-201ENST00000341866 CCDC180Q9P1Z9 1646 aa24.06■■□□□ 1.44
LINC01164-201ENST00000341866 ZCCHC6Q5VYS8 1495 aaKnown RBP23.05■■□□□ 1.28
LINC01164-201ENST00000341866 DCAF1Q9Y4B6 1507 aa22.88■■□□□ 1.25
LINC01164-201ENST00000341866 MYO15BQ96JP2 1530 aa22.65■■□□□ 1.22
LINC01164-201ENST00000341866 SHROOM4Q9ULL8 1493 aa22.29■■□□□ 1.16
LINC01164-201ENST00000341866 NACADO15069 1562 aa22.25■■□□□ 1.15
LINC01164-201ENST00000341866 DCAF8L2P0C7V8 631 aa22.12■■□□□ 1.13
LINC01164-201ENST00000341866 ABCC9O60706 1549 aa22.11■■□□□ 1.13
LINC01164-201ENST00000341866 RB1CC1Q8TDY2 1594 aa21.95■■□□□ 1.1
LINC01164-201ENST00000341866 SUPT5HO00267 1087 aaKnown RBP21.92■■□□□ 1.1
LINC01164-201ENST00000341866 UNC13AQ9UPW8 1703 aa21.72■■□□□ 1.07
LINC01164-201ENST00000341866 SCRIBQ14160 1630 aa21.71■■□□□ 1.07
LINC01164-201ENST00000341866 BICRAQ9NZM4 1560 aa21.44■■□□□ 1.02
LINC01164-201ENST00000341866 RSF1Q96T23 1441 aaPredicted RBP21.13■□□□□ 0.97
LINC01164-201ENST00000341866 CECR2Q9BXF3 1484 aa21.09■□□□□ 0.97
LINC01164-201ENST00000341866 BAZ1AQ9NRL2 1556 aaPredicted RBP21.08■□□□□ 0.97
LINC01164-201ENST00000341866 MROH2BQ7Z745 1585 aa21.04■□□□□ 0.96
LINC01164-201ENST00000341866 SMARCA4P51532 1647 aa21.03■□□□□ 0.96
LINC01164-201ENST00000341866 PEG3Q9GZU2 1588 aa21.01■□□□□ 0.95
LINC01164-201ENST00000341866 WIZO95785 1651 aa20.88■□□□□ 0.93
LINC01164-201ENST00000341866 CHIC1Q5VXU3 224 aa20.76■□□□□ 0.91
LINC01164-201ENST00000341866 TOP2AP11388 1531 aaKnown RBP20.76■□□□□ 0.91
LINC01164-201ENST00000341866 PABPN1Q86U42 306 aaKnown RBP eCLIP20.68■□□□□ 0.9
LINC01164-201ENST00000341866 EIF4G1Q04637 1599 aaKnown RBP20.66■□□□□ 0.9
LINC01164-201ENST00000341866 HRCP23327 699 aa20.65■□□□□ 0.9
LINC01164-201ENST00000341866 EHMT2Q96KQ7 1210 aa20.65■□□□□ 0.9
LINC01164-201ENST00000341866 SMARCA2P51531 1590 aa20.62■□□□□ 0.89
LINC01164-201ENST00000341866 ATAD2BQ9ULI0 1458 aa20.59■□□□□ 0.89
LINC01164-201ENST00000341866 HMGXB3Q12766 1538 aa20.56■□□□□ 0.88
LINC01164-201ENST00000341866 LOC105371045A0A1W2PR82 267 aa20.55■□□□□ 0.88
LINC01164-201ENST00000341866 PCGF6Q9BYE7 350 aa20.51■□□□□ 0.87
LINC01164-201ENST00000341866 NCAPD3P42695 1498 aa20.5■□□□□ 0.87
LINC01164-201ENST00000341866 FAM9AQ8IZU1 332 aaPredicted RBP20.44■□□□□ 0.86
LINC01164-201ENST00000341866 CCDC88BA6NC98 1476 aa20.42■□□□□ 0.86
LINC01164-201ENST00000341866 PPARGC1BQ86YN6 1023 aaKnown RBP20.41■□□□□ 0.86
LINC01164-201ENST00000341866 PELP1Q8IZL8 1130 aaKnown RBP20.37■□□□□ 0.85
LINC01164-201ENST00000341866 BAZ1BQ9UIG0 1483 aaKnown RBP20.35■□□□□ 0.85
LINC01164-201ENST00000341866 CC2D2AQ9P2K1 1620 aa20.29■□□□□ 0.84
LINC01164-201ENST00000341866 PRDM2Q13029 1718 aa20.18■□□□□ 0.82
LINC01164-201ENST00000341866 TRIM41Q8WV44 630 aa20.14■□□□□ 0.82
LINC01164-201ENST00000341866 CFTRP13569 1480 aa20.03■□□□□ 0.8
LINC01164-201ENST00000341866 BIVM-ERCC5R4GMW8 1640 aa19.93■□□□□ 0.78
LINC01164-201ENST00000341866 ABCC8Q09428 1581 aa19.9■□□□□ 0.78
LINC01164-201ENST00000341866 TTBK1Q5TCY1 1321 aaPredicted RBP19.88■□□□□ 0.77
LINC01164-201ENST00000341866 TOP2BQ02880 1626 aa19.85■□□□□ 0.77
LINC01164-201ENST00000341866 SYNJ1O43426 1573 aa19.85■□□□□ 0.77
LINC01164-201ENST00000341866 SCAF1Q9H7N4 1312 aaKnown RBP19.82■□□□□ 0.76
LINC01164-201ENST00000341866 LAMC3Q9Y6N6 1575 aa19.8■□□□□ 0.76
LINC01164-201ENST00000341866 CADPSQ9ULU8 1353 aa19.8■□□□□ 0.76
LINC01164-201ENST00000341866 WRNQ14191 1432 aaPredicted RBP eCLIP19.77■□□□□ 0.75
LINC01164-201ENST00000341866 CUX1P39880 1505 aa19.7■□□□□ 0.74
LINC01164-201ENST00000341866 TRIM26Q12899 539 aaPredicted RBP19.69■□□□□ 0.74
LINC01164-201ENST00000341866 EEA1Q15075 1411 aa19.63■□□□□ 0.73
LINC01164-201ENST00000341866 MYT1Q01538 1121 aa19.63■□□□□ 0.73
LINC01164-201ENST00000341866 FANCD2Q9BXW9 1451 aa19.56■□□□□ 0.72
LINC01164-201ENST00000341866 DNMBPQ6XZF7 1577 aa19.55■□□□□ 0.72
LINC01164-201ENST00000341866 NESP48681 1621 aa19.54■□□□□ 0.72
LINC01164-201ENST00000341866 KIF21AQ7Z4S6 1674 aa19.51■□□□□ 0.71
LINC01164-201ENST00000341866 WDR97A6NE52 1622 aa19.51■□□□□ 0.71
LINC01164-201ENST00000341866 RANGAP1P46060 587 aaPredicted RBP19.5■□□□□ 0.71
LINC01164-201ENST00000341866 DNAJC5BQ9UF47 199 aa19.5■□□□□ 0.71
LINC01164-201ENST00000341866 KIF21BO75037 1637 aa19.5■□□□□ 0.71
LINC01164-201ENST00000341866 SOGA1O94964 1423 aa19.5■□□□□ 0.71
LINC01164-201ENST00000341866 RUSC2Q8N2Y8 1516 aa19.46■□□□□ 0.71
LINC01164-201ENST00000341866 TOPBP1Q92547 1522 aa19.43■□□□□ 0.7
LINC01164-201ENST00000341866 CEP164Q9UPV0 1460 aa19.42■□□□□ 0.7
LINC01164-201ENST00000341866 PDS5BQ9NTI5 1447 aa19.42■□□□□ 0.7
LINC01164-201ENST00000341866 URB2Q14146 1524 aaKnown RBP19.42■□□□□ 0.7
LINC01164-201ENST00000341866 UBTFP17480 764 aaKnown RBP19.38■□□□□ 0.69
LINC01164-201ENST00000341866 FGD5Q6ZNL6 1462 aa19.37■□□□□ 0.69
LINC01164-201ENST00000341866 ERICH3Q5RHP9 1530 aa19.36■□□□□ 0.69
LINC01164-201ENST00000341866 ABCA10Q8WWZ4 1543 aa19.36■□□□□ 0.69
LINC01164-201ENST00000341866 PRXQ9BXM0 1461 aa19.34■□□□□ 0.69
LINC01164-201ENST00000341866 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.33■□□□□ 0.69
LINC01164-201ENST00000341866 WDR62O43379 1518 aa19.33■□□□□ 0.68
LINC01164-201ENST00000341866 POLA1P09884 1462 aaPredicted RBP19.32■□□□□ 0.68
LINC01164-201ENST00000341866 TARBP1Q13395 1621 aaKnown RBP19.32■□□□□ 0.68
LINC01164-201ENST00000341866 ABCA5Q8WWZ7 1642 aa19.3■□□□□ 0.68
LINC01164-201ENST00000341866 THOC2Q8NI27 1593 aaKnown RBP19.29■□□□□ 0.68
LINC01164-201ENST00000341866 MRC2Q9UBG0 1479 aa19.26■□□□□ 0.67
LINC01164-201ENST00000341866 GOLGA3Q08378 1498 aa19.25■□□□□ 0.67
LINC01164-201ENST00000341866 CSRNP3Q8WYN3 585 aa19.25■□□□□ 0.67
LINC01164-201ENST00000341866 CCER1Q8TC90 406 aaPredicted RBP19.24■□□□□ 0.67
LINC01164-201ENST00000341866 KIF27Q86VH2 1401 aa19.24■□□□□ 0.67
LINC01164-201ENST00000341866 TNIKQ9UKE5 1360 aa19.24■□□□□ 0.67
LINC01164-201ENST00000341866 ZEB1P37275 1124 aaPredicted RBP19.2■□□□□ 0.66
LINC01164-201ENST00000341866 CUL7Q14999 1698 aa19.18■□□□□ 0.66
LINC01164-201ENST00000341866 ACIN1Q9UKV3 1341 aaKnown RBP19.18■□□□□ 0.66
LINC01164-201ENST00000341866 NEUROD1Q13562 356 aa19.17■□□□□ 0.66
LINC01164-201ENST00000341866 CUX2O14529 1486 aa19.16■□□□□ 0.66
LINC01164-201ENST00000341866 IGF1RP08069 1367 aa19.15■□□□□ 0.66
LINC01164-201ENST00000341866 RAPGEF2Q9Y4G8 1499 aa19.15■□□□□ 0.66
LINC01164-201ENST00000341866 RAD54L2Q9Y4B4 1467 aa19.13■□□□□ 0.65
LINC01164-201ENST00000341866 GTF3C3Q9Y5Q9 886 aa19.13■□□□□ 0.65
LINC01164-201ENST00000341866 PBRM1Q86U86 1689 aa19.09■□□□□ 0.65
LINC01164-201ENST00000341866 IFT140Q96RY7 1462 aa19.05■□□□□ 0.64
LINC01164-201ENST00000341866 CEP162Q5TB80 1403 aa19.04■□□□□ 0.64
LINC01164-201ENST00000341866 HNRNPUL2Q1KMD3 747 aaKnown RBP19.01■□□□□ 0.63
LINC01164-201ENST00000341866 CTTNBP2Q8WZ74 1663 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms