Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
FOXR1Q6PIV2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC22.3■■□□□ 1.16
FOXR1Q6PIV2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.3■■□□□ 1.16
FOXR1Q6PIV2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
FOXR1Q6PIV2 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC22.29■■□□□ 1.16
FOXR1Q6PIV2 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
FOXR1Q6PIV2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
FOXR1Q6PIV2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
FOXR1Q6PIV2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
FOXR1Q6PIV2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC22.29■■□□□ 1.16
FOXR1Q6PIV2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.29■■□□□ 1.16
FOXR1Q6PIV2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.29■■□□□ 1.16
FOXR1Q6PIV2 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
FOXR1Q6PIV2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
FOXR1Q6PIV2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.29■■□□□ 1.16
FOXR1Q6PIV2 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC22.29■■□□□ 1.16
FOXR1Q6PIV2 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
FOXR1Q6PIV2 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC22.29■■□□□ 1.16
FOXR1Q6PIV2 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
FOXR1Q6PIV2 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
FOXR1Q6PIV2 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
FOXR1Q6PIV2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC22.28■■□□□ 1.16
FOXR1Q6PIV2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
FOXR1Q6PIV2 SRD5A1P1-201ENST00000442297 786 ntBASIC22.28■■□□□ 1.16
FOXR1Q6PIV2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.28■■□□□ 1.16
FOXR1Q6PIV2 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.28■■□□□ 1.16
FOXR1Q6PIV2 AL161729.1-201ENST00000604104 1402 ntBASIC22.28■■□□□ 1.16
FOXR1Q6PIV2 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC22.28■■□□□ 1.16
FOXR1Q6PIV2 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
FOXR1Q6PIV2 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
FOXR1Q6PIV2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
FOXR1Q6PIV2 PKD1P6-201ENST00000343738 4769 ntBASIC22.27■■□□□ 1.16
FOXR1Q6PIV2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
FOXR1Q6PIV2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
FOXR1Q6PIV2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.27■■□□□ 1.16
FOXR1Q6PIV2 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.27■■□□□ 1.16
FOXR1Q6PIV2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.27■■□□□ 1.16
FOXR1Q6PIV2 RARRES2P6-201ENST00000567333 442 ntBASIC22.27■■□□□ 1.16
FOXR1Q6PIV2 AC092666.2-201ENST00000613287 246 ntBASIC22.27■■□□□ 1.16
FOXR1Q6PIV2 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
FOXR1Q6PIV2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
FOXR1Q6PIV2 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
FOXR1Q6PIV2 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
FOXR1Q6PIV2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
FOXR1Q6PIV2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
FOXR1Q6PIV2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
FOXR1Q6PIV2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC22.26■■□□□ 1.15
FOXR1Q6PIV2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.26■■□□□ 1.15
FOXR1Q6PIV2 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
FOXR1Q6PIV2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.26■■□□□ 1.15
FOXR1Q6PIV2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
FOXR1Q6PIV2 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
FOXR1Q6PIV2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
FOXR1Q6PIV2 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
FOXR1Q6PIV2 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.26■■□□□ 1.15
FOXR1Q6PIV2 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
FOXR1Q6PIV2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.26■■□□□ 1.15
FOXR1Q6PIV2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.26■■□□□ 1.15
FOXR1Q6PIV2 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.26■■□□□ 1.15
FOXR1Q6PIV2 MIR6722-201ENST00000617286 78 ntBASIC22.26■■□□□ 1.15
FOXR1Q6PIV2 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
FOXR1Q6PIV2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
FOXR1Q6PIV2 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
FOXR1Q6PIV2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.26■■□□□ 1.15
FOXR1Q6PIV2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
FOXR1Q6PIV2 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
FOXR1Q6PIV2 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22.25■■□□□ 1.15
FOXR1Q6PIV2 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
FOXR1Q6PIV2 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
FOXR1Q6PIV2 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
FOXR1Q6PIV2 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
FOXR1Q6PIV2 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
FOXR1Q6PIV2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
FOXR1Q6PIV2 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
FOXR1Q6PIV2 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
FOXR1Q6PIV2 AC135279.3-201ENST00000610945 1311 ntBASIC22.25■■□□□ 1.15
FOXR1Q6PIV2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.25■■□□□ 1.15
FOXR1Q6PIV2 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
FOXR1Q6PIV2 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC22.24■■□□□ 1.15
FOXR1Q6PIV2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
FOXR1Q6PIV2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
FOXR1Q6PIV2 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
FOXR1Q6PIV2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
FOXR1Q6PIV2 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
FOXR1Q6PIV2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
FOXR1Q6PIV2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
FOXR1Q6PIV2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
FOXR1Q6PIV2 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.24■■□□□ 1.15
FOXR1Q6PIV2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.24■■□□□ 1.15
FOXR1Q6PIV2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
FOXR1Q6PIV2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
FOXR1Q6PIV2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.15
FOXR1Q6PIV2 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
FOXR1Q6PIV2 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
FOXR1Q6PIV2 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
FOXR1Q6PIV2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.24■■□□□ 1.15
FOXR1Q6PIV2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
FOXR1Q6PIV2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC22.23■■□□□ 1.15
FOXR1Q6PIV2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
FOXR1Q6PIV2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms