Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RNF223E7ERA6 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RNF223E7ERA6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.93■□□□□ 0.46
RNF223E7ERA6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.93■□□□□ 0.46
RNF223E7ERA6 NIFKP4-201ENST00000567275 1192 ntBASIC17.93■□□□□ 0.46
RNF223E7ERA6 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.93■□□□□ 0.46
RNF223E7ERA6 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF223E7ERA6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF223E7ERA6 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
RNF223E7ERA6 DUSP8P5-201ENST00000422884 1815 ntBASIC17.93■□□□□ 0.46
RNF223E7ERA6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF223E7ERA6 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF223E7ERA6 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF223E7ERA6 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF223E7ERA6 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF223E7ERA6 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF223E7ERA6 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF223E7ERA6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF223E7ERA6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF223E7ERA6 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
RNF223E7ERA6 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF223E7ERA6 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF223E7ERA6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF223E7ERA6 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF223E7ERA6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF223E7ERA6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF223E7ERA6 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF223E7ERA6 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.91■□□□□ 0.46
RNF223E7ERA6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF223E7ERA6 AL139125.2-201ENST00000623134 1869 ntBASIC17.91■□□□□ 0.46
RNF223E7ERA6 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
RNF223E7ERA6 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF223E7ERA6 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF223E7ERA6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF223E7ERA6 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RNF223E7ERA6 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.91■□□□□ 0.46
RNF223E7ERA6 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RNF223E7ERA6 AC073210.2-201ENST00000430369 194 ntBASIC17.91■□□□□ 0.46
RNF223E7ERA6 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.91■□□□□ 0.46
RNF223E7ERA6 RNA5SP413-201ENST00000516373 109 ntBASIC17.91■□□□□ 0.46
RNF223E7ERA6 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF223E7ERA6 AC008687.6-201ENST00000596318 630 ntBASIC17.91■□□□□ 0.46
RNF223E7ERA6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.91■□□□□ 0.46
RNF223E7ERA6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
RNF223E7ERA6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF223E7ERA6 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RNF223E7ERA6 AC055733.4-201ENST00000638462 1354 ntBASIC17.91■□□□□ 0.46
RNF223E7ERA6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF223E7ERA6 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RNF223E7ERA6 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF223E7ERA6 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.9■□□□□ 0.46
RNF223E7ERA6 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF223E7ERA6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.9■□□□□ 0.46
RNF223E7ERA6 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF223E7ERA6 AC010141.2-201ENST00000452426 721 ntBASIC17.9■□□□□ 0.46
RNF223E7ERA6 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF223E7ERA6 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.9■□□□□ 0.46
RNF223E7ERA6 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
RNF223E7ERA6 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC17.9■□□□□ 0.46
RNF223E7ERA6 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF223E7ERA6 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.9■□□□□ 0.46
RNF223E7ERA6 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RNF223E7ERA6 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF223E7ERA6 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RNF223E7ERA6 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
RNF223E7ERA6 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF223E7ERA6 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF223E7ERA6 KRT18P29-201ENST00000397031 1267 ntBASIC17.89■□□□□ 0.45
RNF223E7ERA6 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF223E7ERA6 POU5F1P3-201ENST00000428824 1078 ntBASIC17.89■□□□□ 0.45
RNF223E7ERA6 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF223E7ERA6 MIR4758-201ENST00000577688 71 ntBASIC17.89■□□□□ 0.45
RNF223E7ERA6 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF223E7ERA6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.89■□□□□ 0.45
RNF223E7ERA6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.88■□□□□ 0.45
RNF223E7ERA6 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF223E7ERA6 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RNF223E7ERA6 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF223E7ERA6 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF223E7ERA6 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF223E7ERA6 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF223E7ERA6 KRT18P20-201ENST00000548986 1279 ntBASIC17.88■□□□□ 0.45
RNF223E7ERA6 AC138907.5-202ENST00000569484 235 ntBASIC17.88■□□□□ 0.45
RNF223E7ERA6 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF223E7ERA6 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF223E7ERA6 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF223E7ERA6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF223E7ERA6 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF223E7ERA6 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
RNF223E7ERA6 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF223E7ERA6 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF223E7ERA6 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF223E7ERA6 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF223E7ERA6 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.87■□□□□ 0.45
RNF223E7ERA6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.87■□□□□ 0.45
RNF223E7ERA6 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.87■□□□□ 0.45
RNF223E7ERA6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF223E7ERA6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.87■□□□□ 0.45
RNF223E7ERA6 AC013268.1-206ENST00000638368 961 ntBASIC17.87■□□□□ 0.45
RNF223E7ERA6 AC112229.1-201ENST00000639295 961 ntBASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms