Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC16.58■□□□□ 0.24
TRAV34A0A0B4J273 MIR4281-201ENST00000580852 62 ntBASIC16.58■□□□□ 0.24
TRAV34A0A0B4J273 AC019171.1-201ENST00000601251 1056 ntBASIC16.58■□□□□ 0.24
TRAV34A0A0B4J273 U85056.1-201ENST00000616429 682 ntBASIC16.58■□□□□ 0.24
TRAV34A0A0B4J273 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC16.58■□□□□ 0.24
TRAV34A0A0B4J273 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TRAV34A0A0B4J273 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV34A0A0B4J273 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.58■□□□□ 0.24
TRAV34A0A0B4J273 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV34A0A0B4J273 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV34A0A0B4J273 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV34A0A0B4J273 ME2-206ENST00000638410 2289 ntTSL 5 BASIC16.58■□□□□ 0.24
TRAV34A0A0B4J273 ME2-210ENST00000639255 2262 ntTSL 5 BASIC16.58■□□□□ 0.24
TRAV34A0A0B4J273 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV34A0A0B4J273 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV34A0A0B4J273 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.58■□□□□ 0.24
TRAV34A0A0B4J273 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV34A0A0B4J273 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TRAV34A0A0B4J273 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV34A0A0B4J273 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRAV34A0A0B4J273 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV34A0A0B4J273 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV34A0A0B4J273 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV34A0A0B4J273 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRAV34A0A0B4J273 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRAV34A0A0B4J273 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC16.57■□□□□ 0.24
TRAV34A0A0B4J273 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TRAV34A0A0B4J273 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV34A0A0B4J273 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV34A0A0B4J273 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV34A0A0B4J273 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRAV34A0A0B4J273 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TRAV34A0A0B4J273 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV34A0A0B4J273 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV34A0A0B4J273 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV34A0A0B4J273 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV34A0A0B4J273 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV34A0A0B4J273 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV34A0A0B4J273 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV34A0A0B4J273 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAV34A0A0B4J273 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV34A0A0B4J273 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV34A0A0B4J273 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAV34A0A0B4J273 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV34A0A0B4J273 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TRAV34A0A0B4J273 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV34A0A0B4J273 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAV34A0A0B4J273 MTX2-204ENST00000443241 799 ntTSL 3 BASIC16.56■□□□□ 0.24
TRAV34A0A0B4J273 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV34A0A0B4J273 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC16.56■□□□□ 0.24
TRAV34A0A0B4J273 MBP-237ENST00000579129 1052 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAV34A0A0B4J273 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC16.56■□□□□ 0.24
TRAV34A0A0B4J273 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TRAV34A0A0B4J273 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV34A0A0B4J273 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV34A0A0B4J273 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV34A0A0B4J273 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAV34A0A0B4J273 AL157384.1-201ENST00000445995 2473 ntBASIC16.56■□□□□ 0.24
TRAV34A0A0B4J273 LINC01529-204ENST00000636474 1715 ntBASIC16.56■□□□□ 0.24
TRAV34A0A0B4J273 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV34A0A0B4J273 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV34A0A0B4J273 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TRAV34A0A0B4J273 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV34A0A0B4J273 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV34A0A0B4J273 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV34A0A0B4J273 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV34A0A0B4J273 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TRAV34A0A0B4J273 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV34A0A0B4J273 REST-206ENST00000612429 1376 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAV34A0A0B4J273 REST-207ENST00000616975 1370 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAV34A0A0B4J273 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV34A0A0B4J273 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV34A0A0B4J273 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TRAV34A0A0B4J273 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV34A0A0B4J273 DUX4L18-201ENST00000553347 1267 ntBASIC16.55■□□□□ 0.24
TRAV34A0A0B4J273 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TRAV34A0A0B4J273 THA1P-201ENST00000590384 1145 ntBASIC16.55■□□□□ 0.24
TRAV34A0A0B4J273 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TRAV34A0A0B4J273 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC16.55■□□□□ 0.24
TRAV34A0A0B4J273 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TRAV34A0A0B4J273 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV34A0A0B4J273 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV34A0A0B4J273 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV34A0A0B4J273 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV34A0A0B4J273 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV34A0A0B4J273 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV34A0A0B4J273 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV34A0A0B4J273 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TRAV34A0A0B4J273 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV34A0A0B4J273 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV34A0A0B4J273 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV34A0A0B4J273 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAV34A0A0B4J273 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV34A0A0B4J273 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
TRAV34A0A0B4J273 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV34A0A0B4J273 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV34A0A0B4J273 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV34A0A0B4J273 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV34A0A0B4J273 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC16.54■□□□□ 0.24
TRAV34A0A0B4J273 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms