Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 TRAF4-216ENST00000586813 789 ntTSL 321.46■■□□□ 1.033e-10■■□□□ 12.6
XRCC6P12956 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.018e-6■■□□□ 12.6
XRCC6P12956 VARS-220ENST00000461874 845 ntTSL 521.11■□□□□ 0.978e-6■■□□□ 12.6
XRCC6P12956 LEPR-206ENST00000462765 2117 ntTSL 1 (best)21.05■□□□□ 0.963e-10■■□□□ 12.6
XRCC6P12956 PILRB-206ENST00000443526 1364 ntTSL 1 (best)20.95■□□□□ 0.948e-6■■□□□ 12.6
XRCC6P12956 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.938e-6■■□□□ 12.6
XRCC6P12956 RENBP-207ENST00000462086 609 ntTSL 220.75■□□□□ 0.918e-6■■□□□ 12.6
XRCC6P12956 BLVRB-203ENST00000597870 1392 ntTSL 520.73■□□□□ 0.918e-6■■□□□ 12.6
XRCC6P12956 SLC2A1-202ENST00000415851 578 ntTSL 220.73■□□□□ 0.918e-6■■□□□ 12.6
XRCC6P12956 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.872e-7■■□□□ 12.6
XRCC6P12956 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.838e-6■■□□□ 12.6
XRCC6P12956 RENBP-204ENST00000442361 817 ntTSL 320.11■□□□□ 0.818e-6■■□□□ 12.6
XRCC6P12956 MTCL1-209ENST00000520495 3286 ntTSL 220.06■□□□□ 0.88e-6■■□□□ 12.6
XRCC6P12956 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.88e-6■■□□□ 12.6
XRCC6P12956 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.798e-6■■□□□ 12.6
XRCC6P12956 SLC2A1-206ENST00000625233 1031 ntTSL 219.85■□□□□ 0.778e-6■■□□□ 12.6
XRCC6P12956 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.85■□□□□ 0.778e-6■■□□□ 12.6
XRCC6P12956 PILRB-201ENST00000419749 1506 ntTSL 1 (best)19.8■□□□□ 0.768e-6■■□□□ 12.6
XRCC6P12956 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.78■□□□□ 0.768e-6■■□□□ 12.6
XRCC6P12956 PTPN11-204ENST00000531326 573 ntTSL 419.7■□□□□ 0.748e-6■■□□□ 12.6
XRCC6P12956 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.78e-6■■□□□ 12.6
XRCC6P12956 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.78e-6■■□□□ 12.6
XRCC6P12956 JRKL-202ENST00000546177 736 ntTSL 1 (best)19.29■□□□□ 0.688e-6■■□□□ 12.6
XRCC6P12956 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.678e-6■■□□□ 12.6
XRCC6P12956 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.678e-6■■□□□ 12.6
XRCC6P12956 SLC2A1-208ENST00000630287 2398 ntTSL 519.04■□□□□ 0.648e-6■■□□□ 12.6
XRCC6P12956 CDCA5-208ENST00000529290 789 ntTSL 519.02■□□□□ 0.648e-6■■□□□ 12.6
XRCC6P12956 CDCA5-205ENST00000524733 835 ntTSL 318.97■□□□□ 0.638e-6■■□□□ 12.6
XRCC6P12956 LPCAT4-205ENST00000563748 1357 ntTSL 218.77■□□□□ 0.68e-6■■□□□ 12.6
XRCC6P12956 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.588e-6■■□□□ 12.6
XRCC6P12956 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.558e-6■■□□□ 12.6
XRCC6P12956 VARS-216ENST00000428445 863 ntTSL 518.29■□□□□ 0.528e-6■■□□□ 12.6
XRCC6P12956 GATD1-207ENST00000526650 457 ntTSL 318.27■□□□□ 0.528e-6■■□□□ 12.6
XRCC6P12956 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.27■□□□□ 0.528e-6■■□□□ 12.6
XRCC6P12956 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.528e-6■■□□□ 12.6
XRCC6P12956 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.498e-6■■□□□ 12.6
XRCC6P12956 VAPA-204ENST00000577901 917 ntTSL 217.78■□□□□ 0.448e-6■■□□□ 12.6
XRCC6P12956 GATD1-204ENST00000465313 446 ntTSL 317.64■□□□□ 0.418e-6■■□□□ 12.6
XRCC6P12956 SLC2A1-201ENST00000372500 533 ntTSL 317.61■□□□□ 0.418e-6■■□□□ 12.6
XRCC6P12956 RHOT2-212ENST00000564659 854 ntTSL 217.59■□□□□ 0.414e-12■■□□□ 12.6
XRCC6P12956 RETREG2-205ENST00000443757 558 ntTSL 417.32■□□□□ 0.368e-6■■□□□ 12.6
XRCC6P12956 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.17■□□□□ 0.348e-6■■□□□ 12.6
XRCC6P12956 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.15■□□□□ 0.348e-6■■□□□ 12.6
XRCC6P12956 EFTUD2-214ENST00000589769 689 ntTSL 317.14■□□□□ 0.338e-6■■□□□ 12.6
XRCC6P12956 VARS-219ENST00000461328 662 ntTSL 317.09■□□□□ 0.338e-6■■□□□ 12.6
XRCC6P12956 CDK10-210ENST00000507205 1215 ntTSL 217.07■□□□□ 0.323e-10■■□□□ 12.6
XRCC6P12956 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.8■□□□□ 0.288e-6■■□□□ 12.6
XRCC6P12956 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.288e-6■■□□□ 12.6
XRCC6P12956 VARS-223ENST00000474643 885 ntTSL 516.73■□□□□ 0.278e-6■■□□□ 12.6
XRCC6P12956 VAPA-209ENST00000585042 567 ntTSL 416.73■□□□□ 0.278e-6■■□□□ 12.6
XRCC6P12956 GATD1-208ENST00000528309 510 ntTSL 316.35■□□□□ 0.218e-6■■□□□ 12.6
XRCC6P12956 TRAF4-212ENST00000498540 748 ntTSL 316.22■□□□□ 0.193e-10■■□□□ 12.6
XRCC6P12956 PILRB-211ENST00000493091 4345 ntTSL 216.16■□□□□ 0.188e-6■■□□□ 12.6
XRCC6P12956 LEPR-201ENST00000344610 2935 ntTSL 1 (best) BASIC16.03■□□□□ 0.163e-10■■□□□ 12.6
XRCC6P12956 DYNC1H1-208ENST00000556139 763 ntTSL 316.01■□□□□ 0.158e-6■■□□□ 12.6
XRCC6P12956 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.79■□□□□ 0.128e-6■■□□□ 12.6
XRCC6P12956 SLC2A1-209ENST00000630821 591 ntTSL 215.75■□□□□ 0.118e-6■■□□□ 12.6
XRCC6P12956 PILRB-209ENST00000455145 902 ntTSL 515.69■□□□□ 0.18e-6■■□□□ 12.6
XRCC6P12956 PILRB-203ENST00000431140 772 ntTSL 315.62■□□□□ 0.098e-6■■□□□ 12.6
XRCC6P12956 SLC2A1-203ENST00000426263 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.088e-6■■□□□ 12.6
XRCC6P12956 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.088e-6■■□□□ 12.6
XRCC6P12956 TRAF4-210ENST00000475329 544 ntTSL 315.49■□□□□ 0.073e-10■■□□□ 12.6
XRCC6P12956 DDX27-204ENST00000484427 4929 ntTSL 1 (best)15.41■□□□□ 0.068e-6■■□□□ 12.6
XRCC6P12956 VARS-226ENST00000483275 450 ntTSL 315.32■□□□□ 0.048e-6■■□□□ 12.6
XRCC6P12956 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.048e-6■■□□□ 12.6
XRCC6P12956 CYTOR-205ENST00000413202 422 ntTSL 1 (best)15.28■□□□□ 0.042e-7■■□□□ 12.6
XRCC6P12956 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC15.23■□□□□ 0.038e-6■■□□□ 12.6
XRCC6P12956 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC14.93□□□□□ -0.028e-6■■□□□ 12.6
XRCC6P12956 DDX27-206ENST00000618172 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.048e-6■■□□□ 12.6
XRCC6P12956 UBR4-203ENST00000375225 1533 ntTSL 2 BASIC14.78□□□□□ -0.048e-6■■□□□ 12.6
XRCC6P12956 EP400-208ENST00000611841 3129 ntTSL 514.52□□□□□ -0.082e-7■■□□□ 12.6
XRCC6P12956 JRKL-201ENST00000332349 2855 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.098e-6■■□□□ 12.6
XRCC6P12956 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.158e-6■■□□□ 12.6
XRCC6P12956 BLVRB-204ENST00000601346 676 ntTSL 213.82□□□□□ -0.28e-6■■□□□ 12.6
XRCC6P12956 GATD1-201ENST00000319863 4357 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.228e-6■■□□□ 12.6
XRCC6P12956 DDX27-207ENST00000622530 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.238e-6■■□□□ 12.6
XRCC6P12956 TRAF4-202ENST00000262396 683 ntTSL 1 (best) BASIC13.56□□□□□ -0.243e-10■■□□□ 12.6
XRCC6P12956 LEPR-204ENST00000371059 3079 ntTSL 1 (best) BASIC13.47□□□□□ -0.253e-10■■□□□ 12.6
XRCC6P12956 CYTOR-202ENST00000409054 1096 ntTSL 2 BASIC13.39□□□□□ -0.272e-7■■□□□ 12.6
XRCC6P12956 RETREG2-208ENST00000458520 992 ntTSL 313.38□□□□□ -0.278e-6■■□□□ 12.6
XRCC6P12956 CYTOR-201ENST00000331944 529 ntTSL 1 (best)13.2□□□□□ -0.32e-7■■□□□ 12.6
XRCC6P12956 DDX27-201ENST00000371764 2643 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.318e-6■■□□□ 12.6
XRCC6P12956 GATD1-202ENST00000354286 3973 ntTSL 513.06□□□□□ -0.328e-6■■□□□ 12.6
XRCC6P12956 CDCA5-210ENST00000533015 563 ntTSL 212.95□□□□□ -0.348e-6■■□□□ 12.6
XRCC6P12956 CYTOR-209ENST00000423846 457 ntTSL 1 (best)12.61□□□□□ -0.392e-7■■□□□ 12.6
XRCC6P12956 EFTUD2-202ENST00000426333 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.48e-6■■□□□ 12.6
XRCC6P12956 CYTOR-208ENST00000419680 675 ntTSL 5 BASIC12.35□□□□□ -0.432e-7■■□□□ 12.6
XRCC6P12956 CYTOR-210ENST00000437561 455 ntTSL 212.35□□□□□ -0.432e-7■■□□□ 12.6
XRCC6P12956 CYTOR-211ENST00000455131 733 ntTSL 5 BASIC12.35□□□□□ -0.432e-7■■□□□ 12.6
XRCC6P12956 PILRB-212ENST00000608825 587 ntAPPRIS ALT2 TSL 311.97□□□□□ -0.498e-6■■□□□ 12.6
XRCC6P12956 EFTUD2-219ENST00000590977 2422 ntTSL 211.71□□□□□ -0.548e-6■■□□□ 12.6
XRCC6P12956 EFTUD2-201ENST00000402521 3045 ntTSL 2 BASIC11.7□□□□□ -0.548e-6■■□□□ 12.6
XRCC6P12956 CDCA5-206ENST00000525464 672 ntTSL 511.65□□□□□ -0.548e-6■■□□□ 12.6
XRCC6P12956 PILRB-205ENST00000438231 603 ntTSL 311.28□□□□□ -0.68e-6■■□□□ 12.6
XRCC6P12956 EFTUD2-205ENST00000586276 3678 ntTSL 210.48□□□□□ -0.738e-6■■□□□ 12.6
XRCC6P12956 KIF22-204ENST00000563263 600 ntTSL 310.47□□□□□ -0.732e-7■■□□□ 12.6
XRCC6P12956 EFTUD2-223ENST00000592576 3364 ntTSL 2 BASIC10.2□□□□□ -0.788e-6■■□□□ 12.6
XRCC6P12956 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.792e-7■■□□□ 12.6
XRCC6P12956 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.822e-7■■□□□ 12.6
XRCC6P12956 EFTUD2-218ENST00000590367 3638 ntTSL 29.89□□□□□ -0.838e-6■■□□□ 12.6
Retrieved 100 of 6,788 protein–RNA pairs in 41.3 ms