RNA–Protein interactions for RNA: ENST00000520495.5

MTCL1-209, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 2

Gene MTCL1, Length 3,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-209ENST00000520495 NISCHQ9Y2I1 1504 aa29.49■■■□□ 2.31
MTCL1-209ENST00000520495 HRCP23327 699 aa26.35■■□□□ 1.81
MTCL1-209ENST00000520495 SHROOM4Q9ULL8 1493 aa25.99■■□□□ 1.75
MTCL1-209ENST00000520495 PPARGC1BQ86YN6 1023 aaKnown RBP25.75■■□□□ 1.71
MTCL1-209ENST00000520495 PCGF6Q9BYE7 350 aa25.71■■□□□ 1.71
MTCL1-209ENST00000520495 PELP1Q8IZL8 1130 aaKnown RBP25.68■■□□□ 1.7
MTCL1-209ENST00000520495 DCAF8L2P0C7V8 631 aa25.66■■□□□ 1.7
MTCL1-209ENST00000520495 SUPT5HO00267 1087 aaKnown RBP25.65■■□□□ 1.7
MTCL1-209ENST00000520495 MYO15BQ96JP2 1530 aa25.5■■□□□ 1.67
MTCL1-209ENST00000520495 CCDC180Q9P1Z9 1646 aa25.44■■□□□ 1.66
MTCL1-209ENST00000520495 CHIC1Q5VXU3 224 aa25.35■■□□□ 1.65
MTCL1-209ENST00000520495 DCAF1Q9Y4B6 1507 aa25.06■■□□□ 1.6
MTCL1-209ENST00000520495 SCAF1Q9H7N4 1312 aaKnown RBP24.99■■□□□ 1.59
MTCL1-209ENST00000520495 TRIM26Q12899 539 aaPredicted RBP24.88■■□□□ 1.57
MTCL1-209ENST00000520495 ZCCHC6Q5VYS8 1495 aaKnown RBP24.83■■□□□ 1.56
MTCL1-209ENST00000520495 LOC105371045A0A1W2PR82 267 aa24.76■■□□□ 1.55
MTCL1-209ENST00000520495 ZEB1P37275 1124 aaPredicted RBP24.76■■□□□ 1.55
MTCL1-209ENST00000520495 MYT1Q01538 1121 aa24.74■■□□□ 1.55
MTCL1-209ENST00000520495 ACIN1Q9UKV3 1341 aaKnown RBP24.36■■□□□ 1.49
MTCL1-209ENST00000520495 NEUROD1Q13562 356 aa24.26■■□□□ 1.47
MTCL1-209ENST00000520495 GTF3C3Q9Y5Q9 886 aa24.15■■□□□ 1.46
MTCL1-209ENST00000520495 CENPBP07199 599 aaPredicted RBP24.02■■□□□ 1.44
MTCL1-209ENST00000520495 ABCC9O60706 1549 aa23.9■■□□□ 1.42
MTCL1-209ENST00000520495 DIEXFQ68CQ4 756 aaKnown RBP23.85■■□□□ 1.41
MTCL1-209ENST00000520495 EHMT2Q96KQ7 1210 aa23.84■■□□□ 1.41
MTCL1-209ENST00000520495 SCRIBQ14160 1630 aa23.84■■□□□ 1.41
MTCL1-209ENST00000520495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.76■■□□□ 1.39
MTCL1-209ENST00000520495 CCER1Q8TC90 406 aaPredicted RBP23.74■■□□□ 1.39
MTCL1-209ENST00000520495 TRIM41Q8WV44 630 aa23.73■■□□□ 1.39
MTCL1-209ENST00000520495 FAM9AQ8IZU1 332 aaPredicted RBP23.7■■□□□ 1.38
MTCL1-209ENST00000520495 NACADO15069 1562 aa23.62■■□□□ 1.37
MTCL1-209ENST00000520495 RSF1Q96T23 1441 aaPredicted RBP23.45■■□□□ 1.34
MTCL1-209ENST00000520495 YTHDC1Q96MU7 727 aaKnown RBP23.43■■□□□ 1.34
MTCL1-209ENST00000520495 ZNF316A6NFI3 1004 aaPredicted RBP23.37■■□□□ 1.33
MTCL1-209ENST00000520495 RB1CC1Q8TDY2 1594 aa23.36■■□□□ 1.33
MTCL1-209ENST00000520495 CECR2Q9BXF3 1484 aa23.31■■□□□ 1.32
MTCL1-209ENST00000520495 TTBK1Q5TCY1 1321 aaPredicted RBP23.23■■□□□ 1.31
MTCL1-209ENST00000520495 MIER1Q8N108 512 aa23.23■■□□□ 1.31
MTCL1-209ENST00000520495 PABPN1Q86U42 306 aaKnown RBP eCLIP23.11■■□□□ 1.29
MTCL1-209ENST00000520495 MROH2BQ7Z745 1585 aa23.09■■□□□ 1.29
MTCL1-209ENST00000520495 BCL11AQ9H165 835 aa23.07■■□□□ 1.28
MTCL1-209ENST00000520495 ANP32EQ9BTT0 268 aa23.04■■□□□ 1.28
MTCL1-209ENST00000520495 WRNQ14191 1432 aaPredicted RBP eCLIP22.98■■□□□ 1.27
MTCL1-209ENST00000520495 WIZO95785 1651 aa22.97■■□□□ 1.27
MTCL1-209ENST00000520495 SUPT16HQ9Y5B9 1047 aaKnown RBP22.96■■□□□ 1.27
MTCL1-209ENST00000520495 CLSPNQ9HAW4 1339 aa22.95■■□□□ 1.26
MTCL1-209ENST00000520495 UNC13AQ9UPW8 1703 aa22.95■■□□□ 1.26
MTCL1-209ENST00000520495 TSHZ2Q9NRE2 1034 aa22.91■■□□□ 1.26
MTCL1-209ENST00000520495 CEP162Q5TB80 1403 aa22.78■■□□□ 1.24
MTCL1-209ENST00000520495 CSRNP3Q8WYN3 585 aa22.77■■□□□ 1.24
MTCL1-209ENST00000520495 BICRAQ9NZM4 1560 aa22.67■■□□□ 1.22
MTCL1-209ENST00000520495 HNRNPUL2Q1KMD3 747 aaKnown RBP22.65■■□□□ 1.22
MTCL1-209ENST00000520495 TNIKQ9UKE5 1360 aa22.64■■□□□ 1.22
MTCL1-209ENST00000520495 BAZ1AQ9NRL2 1556 aaPredicted RBP22.63■■□□□ 1.21
MTCL1-209ENST00000520495 ABCC8Q09428 1581 aa22.6■■□□□ 1.21
MTCL1-209ENST00000520495 RANGAP1P46060 587 aaPredicted RBP22.56■■□□□ 1.2
MTCL1-209ENST00000520495 UBTFP17480 764 aaKnown RBP22.52■■□□□ 1.2
MTCL1-209ENST00000520495 CCDC88BA6NC98 1476 aa22.51■■□□□ 1.19
MTCL1-209ENST00000520495 SMARCA4P51532 1647 aa22.51■■□□□ 1.19
MTCL1-209ENST00000520495 EIF4G1Q04637 1599 aaKnown RBP22.51■■□□□ 1.19
MTCL1-209ENST00000520495 SOGA1O94964 1423 aa22.44■■□□□ 1.18
MTCL1-209ENST00000520495 BCANQ96GW7 911 aa22.39■■□□□ 1.18
MTCL1-209ENST00000520495 TOP2AP11388 1531 aaKnown RBP22.37■■□□□ 1.17
MTCL1-209ENST00000520495 RBM19Q9Y4C8 960 aaKnown RBP22.36■■□□□ 1.17
MTCL1-209ENST00000520495 EEA1Q15075 1411 aa22.33■■□□□ 1.16
MTCL1-209ENST00000520495 SMARCA2P51531 1590 aa22.32■■□□□ 1.16
MTCL1-209ENST00000520495 FKBP8Q14318 412 aa22.31■■□□□ 1.16
MTCL1-209ENST00000520495 RUSC2Q8N2Y8 1516 aa22.3■■□□□ 1.16
MTCL1-209ENST00000520495 GOLGA3Q08378 1498 aa22.29■■□□□ 1.16
MTCL1-209ENST00000520495 KCNH8Q96L42 1107 aa22.26■■□□□ 1.15
MTCL1-209ENST00000520495 DHX57Q6P158 1386 aaKnown RBP22.24■■□□□ 1.15
MTCL1-209ENST00000520495 PEG3Q9GZU2 1588 aa22.2■■□□□ 1.14
MTCL1-209ENST00000520495 APLP2Q06481 763 aa22.19■■□□□ 1.14
MTCL1-209ENST00000520495 MSH5O43196 834 aa22.16■■□□□ 1.14
MTCL1-209ENST00000520495 PRKCSHP14314 528 aaPredicted RBP22.16■■□□□ 1.14
MTCL1-209ENST00000520495 CLIP1P30622 1438 aa22.14■■□□□ 1.14
MTCL1-209ENST00000520495 VPS8Q8N3P4 1428 aa22.14■■□□□ 1.13
MTCL1-209ENST00000520495 NEFLP07196 543 aa22.12■■□□□ 1.13
MTCL1-209ENST00000520495 ITGAEP38570 1179 aa22.08■■□□□ 1.12
MTCL1-209ENST00000520495 BAZ1BQ9UIG0 1483 aaKnown RBP22.07■■□□□ 1.12
MTCL1-209ENST00000520495 ATAD2BQ9ULI0 1458 aa22.05■■□□□ 1.12
MTCL1-209ENST00000520495 CEP164Q9UPV0 1460 aa22.05■■□□□ 1.12
MTCL1-209ENST00000520495 FANCIQ9NVI1 1328 aa21.99■■□□□ 1.11
MTCL1-209ENST00000520495 ERICH6Q7L0X2 663 aa21.96■■□□□ 1.11
MTCL1-209ENST00000520495 KIF21BO75037 1637 aa21.95■■□□□ 1.1
MTCL1-209ENST00000520495 DDX10Q13206 875 aaKnown RBP21.91■■□□□ 1.1
MTCL1-209ENST00000520495 SYNJ1O43426 1573 aa21.9■■□□□ 1.1
MTCL1-209ENST00000520495 TRIM52Q96A61 297 aa21.89■■□□□ 1.09
MTCL1-209ENST00000520495 MYT1LQ9UL68 1186 aa21.89■■□□□ 1.09
MTCL1-209ENST00000520495 CDK11AQ9UQ88 783 aaPredicted RBP21.83■■□□□ 1.09
MTCL1-209ENST00000520495 DEKP35659 375 aaKnown RBP21.82■■□□□ 1.08
MTCL1-209ENST00000520495 CCER2I3L3R5 266 aa21.81■■□□□ 1.08
MTCL1-209ENST00000520495 PPP1R15AO75807 674 aaPredicted RBP21.8■■□□□ 1.08
MTCL1-209ENST00000520495 CUX2O14529 1486 aa21.8■■□□□ 1.08
MTCL1-209ENST00000520495 RAPGEF2Q9Y4G8 1499 aa21.8■■□□□ 1.08
MTCL1-209ENST00000520495 HMGXB3Q12766 1538 aa21.8■■□□□ 1.08
MTCL1-209ENST00000520495 NCAPD3P42695 1498 aa21.79■■□□□ 1.08
MTCL1-209ENST00000520495 KANK4Q5T7N3 995 aaPredicted RBP21.79■■□□□ 1.08
MTCL1-209ENST00000520495 RRBP1Q9P2E9 1410 aaKnown RBP21.77■■□□□ 1.08
MTCL1-209ENST00000520495 ANP32CO43423 234 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms