Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOA1P02647 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOA1P02647 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOA1P02647 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
APOA1P02647 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.21■□□□□ 0.67
APOA1P02647 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
APOA1P02647 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
APOA1P02647 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOA1P02647 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
APOA1P02647 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.2■□□□□ 0.66
APOA1P02647 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APOA1P02647 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
APOA1P02647 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
APOA1P02647 RPS2P7-201ENST00000447334 885 ntBASIC19.2■□□□□ 0.66
APOA1P02647 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
APOA1P02647 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
APOA1P02647 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
APOA1P02647 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APOA1P02647 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
APOA1P02647 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.2■□□□□ 0.66
APOA1P02647 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
APOA1P02647 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.2■□□□□ 0.66
APOA1P02647 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
APOA1P02647 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
APOA1P02647 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
APOA1P02647 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
APOA1P02647 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
APOA1P02647 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
APOA1P02647 RPS2P35-201ENST00000443417 897 ntBASIC19.19■□□□□ 0.66
APOA1P02647 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.19■□□□□ 0.66
APOA1P02647 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
APOA1P02647 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APOA1P02647 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.19■□□□□ 0.66
APOA1P02647 AL353803.4-201ENST00000565882 1934 ntBASIC19.19■□□□□ 0.66
APOA1P02647 AC087742.1-201ENST00000575880 1738 ntBASIC19.19■□□□□ 0.66
APOA1P02647 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APOA1P02647 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
APOA1P02647 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.18■□□□□ 0.66
APOA1P02647 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APOA1P02647 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APOA1P02647 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.18■□□□□ 0.66
APOA1P02647 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.18■□□□□ 0.66
APOA1P02647 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APOA1P02647 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
APOA1P02647 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APOA1P02647 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
APOA1P02647 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.18■□□□□ 0.66
APOA1P02647 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
APOA1P02647 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APOA1P02647 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APOA1P02647 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
APOA1P02647 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APOA1P02647 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
APOA1P02647 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
APOA1P02647 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
APOA1P02647 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.17■□□□□ 0.66
APOA1P02647 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
APOA1P02647 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APOA1P02647 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.17■□□□□ 0.66
APOA1P02647 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
APOA1P02647 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APOA1P02647 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APOA1P02647 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.17■□□□□ 0.66
APOA1P02647 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
APOA1P02647 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
APOA1P02647 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
APOA1P02647 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
APOA1P02647 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
APOA1P02647 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.17■□□□□ 0.66
APOA1P02647 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.17■□□□□ 0.66
APOA1P02647 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APOA1P02647 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.17■□□□□ 0.66
APOA1P02647 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
APOA1P02647 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.16■□□□□ 0.66
APOA1P02647 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
APOA1P02647 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
APOA1P02647 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
APOA1P02647 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
APOA1P02647 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.16■□□□□ 0.66
APOA1P02647 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.16■□□□□ 0.66
APOA1P02647 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APOA1P02647 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APOA1P02647 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
APOA1P02647 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
APOA1P02647 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APOA1P02647 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APOA1P02647 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
APOA1P02647 HCG11-201ENST00000411553 5696 ntBASIC19.15■□□□□ 0.66
APOA1P02647 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APOA1P02647 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.15■□□□□ 0.66
APOA1P02647 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.15■□□□□ 0.66
APOA1P02647 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.15■□□□□ 0.66
APOA1P02647 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APOA1P02647 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
APOA1P02647 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
APOA1P02647 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APOA1P02647 AC244015.2-201ENST00000616358 1861 ntBASIC19.15■□□□□ 0.66
APOA1P02647 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
APOA1P02647 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APOA1P02647 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms